RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ACYP1P07311 99 aa5.28□□□□□ -1.56
UBE2D3-232ENST00000514755 C4orf26Q17RF5 130 aa5.28□□□□□ -1.56
UBE2D3-232ENST00000514755 FAM240AA0A1B0GVK7 77 aa5.27□□□□□ -1.57
UBE2D3-232ENST00000514755 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
UBE2D3-232ENST00000514755 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
UBE2D3-232ENST00000514755 TP53AIP1Q9HCN2 124 aa5.24□□□□□ -1.57
UBE2D3-232ENST00000514755 HIST1H4AP62805 103 aaKnown RBP5.22□□□□□ -1.57
UBE2D3-232ENST00000514755 ATP5EP2Q5VTU8 51 aa5.21□□□□□ -1.58
UBE2D3-232ENST00000514755 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
UBE2D3-232ENST00000514755 A0A087WVE0 104 aa5.2□□□□□ -1.58
UBE2D3-232ENST00000514755 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
UBE2D3-232ENST00000514755 C1orf64Q8NEQ6 169 aa5.18□□□□□ -1.58
UBE2D3-232ENST00000514755 CYP4F30PQ9H0H9 118 aa5.17□□□□□ -1.58
UBE2D3-232ENST00000514755 TRAV22A0A0B4J277 110 aa5.16□□□□□ -1.58
UBE2D3-232ENST00000514755 C5orf47Q569G3 176 aa5.14□□□□□ -1.59
UBE2D3-232ENST00000514755 LOC101927531A0A1B0GV80 90 aa5.12□□□□□ -1.59
UBE2D3-232ENST00000514755 UQCRQO14949 82 aa5.12□□□□□ -1.59
UBE2D3-232ENST00000514755 LCA10Q71F78 164 aa5.12□□□□□ -1.59
UBE2D3-232ENST00000514755 S4R3F8 94 aa5.12□□□□□ -1.59
UBE2D3-232ENST00000514755 H0Y9P7 68 aa5.11□□□□□ -1.59
UBE2D3-232ENST00000514755 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
UBE2D3-232ENST00000514755 J3QR89 54 aa5.06□□□□□ -1.6
UBE2D3-232ENST00000514755 CSAG1Q6PB30 78 aa5.06□□□□□ -1.6
UBE2D3-232ENST00000514755 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-232ENST00000514755 ATOX1O00244 68 aa5.05□□□□□ -1.6
UBE2D3-232ENST00000514755 KLKP1Q107X0 134 aa5.04□□□□□ -1.6
UBE2D3-232ENST00000514755 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
UBE2D3-232ENST00000514755 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
UBE2D3-232ENST00000514755 FAM236AA0A1B0GUQ0 79 aa5.02□□□□□ -1.61
UBE2D3-232ENST00000514755 FAM236BA0A1B0GV22 79 aa5.02□□□□□ -1.61
UBE2D3-232ENST00000514755 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
UBE2D3-232ENST00000514755 MP68P56378 58 aa4.98□□□□□ -1.61
UBE2D3-232ENST00000514755 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
UBE2D3-232ENST00000514755 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
UBE2D3-232ENST00000514755 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
UBE2D3-232ENST00000514755 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
UBE2D3-232ENST00000514755 A8MUN3 132 aa4.93□□□□□ -1.62
UBE2D3-232ENST00000514755 K7ERU9 68 aa4.93□□□□□ -1.62
UBE2D3-232ENST00000514755 MT1BP07438 61 aa4.93□□□□□ -1.62
UBE2D3-232ENST00000514755 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-232ENST00000514755 NDUFC1O43677 76 aa4.92□□□□□ -1.62
UBE2D3-232ENST00000514755 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
UBE2D3-232ENST00000514755 H3BPC8 53 aa4.91□□□□□ -1.62
UBE2D3-232ENST00000514755 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
UBE2D3-232ENST00000514755 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
UBE2D3-232ENST00000514755 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-232ENST00000514755 Q5VV11 94 aa4.87□□□□□ -1.63
UBE2D3-232ENST00000514755 H0YAA0 97 aa4.86□□□□□ -1.63
UBE2D3-232ENST00000514755 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
UBE2D3-232ENST00000514755 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-232ENST00000514755 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
UBE2D3-232ENST00000514755 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
UBE2D3-232ENST00000514755 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
UBE2D3-232ENST00000514755 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
UBE2D3-232ENST00000514755 A6NN06 94 aa4.8□□□□□ -1.64
UBE2D3-232ENST00000514755 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
UBE2D3-232ENST00000514755 P0C880 135 aa4.78□□□□□ -1.64
UBE2D3-232ENST00000514755 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
UBE2D3-232ENST00000514755 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
UBE2D3-232ENST00000514755 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
UBE2D3-232ENST00000514755 ACYP2P14621 99 aa4.73□□□□□ -1.65
UBE2D3-232ENST00000514755 C20orf197Q8N268 126 aa4.71□□□□□ -1.66
UBE2D3-232ENST00000514755 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
UBE2D3-232ENST00000514755 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
UBE2D3-232ENST00000514755 R4GN34 69 aa4.69□□□□□ -1.66
UBE2D3-232ENST00000514755 M0QZ58 72 aa4.67□□□□□ -1.66
UBE2D3-232ENST00000514755 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
UBE2D3-232ENST00000514755 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
UBE2D3-232ENST00000514755 MT1XP80297 61 aa4.64□□□□□ -1.67
UBE2D3-232ENST00000514755 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
UBE2D3-232ENST00000514755 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
UBE2D3-232ENST00000514755 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
UBE2D3-232ENST00000514755 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
UBE2D3-232ENST00000514755 COX7CP15954 63 aa4.59□□□□□ -1.67
UBE2D3-232ENST00000514755 CYSTM1Q9H1C7 97 aa4.59□□□□□ -1.67
UBE2D3-232ENST00000514755 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
UBE2D3-232ENST00000514755 KMT2DO14686 5537 aa4.57□□□□□ -1.68
UBE2D3-232ENST00000514755 COA5Q86WW8 74 aa4.55□□□□□ -1.68
UBE2D3-232ENST00000514755 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
UBE2D3-232ENST00000514755 H7BZZ5 65 aa4.53□□□□□ -1.68
UBE2D3-232ENST00000514755 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
UBE2D3-232ENST00000514755 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
UBE2D3-232ENST00000514755 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
UBE2D3-232ENST00000514755 NEBP20929 6669 aa4.52□□□□□ -1.69
UBE2D3-232ENST00000514755 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
UBE2D3-232ENST00000514755 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
UBE2D3-232ENST00000514755 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
UBE2D3-232ENST00000514755 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
UBE2D3-232ENST00000514755 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
UBE2D3-232ENST00000514755 MDN1Q9NU22 5596 aa4.4□□□□□ -1.7
UBE2D3-232ENST00000514755 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
UBE2D3-232ENST00000514755 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
UBE2D3-232ENST00000514755 SEC61GP60059 68 aa4.37□□□□□ -1.71
UBE2D3-232ENST00000514755 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
UBE2D3-232ENST00000514755 A0A0D9SG42 100 aa4.35□□□□□ -1.71
UBE2D3-232ENST00000514755 A0A1B0GU33 70 aa4.34□□□□□ -1.71
UBE2D3-232ENST00000514755 A8MU10 97 aa4.34□□□□□ -1.71
UBE2D3-232ENST00000514755 SPRR2EP22531 72 aa4.32□□□□□ -1.72
UBE2D3-232ENST00000514755 SPRR2BP35325 72 aa4.32□□□□□ -1.72
UBE2D3-232ENST00000514755 SPRR2AP35326 72 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms