RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 MRPL34Q9BQ48 92 aaKnown RBP2.59□□□□□ -1.99
CLDND1-229ENST00000513988 TTTY13Q9BZ97 58 aa2.59□□□□□ -1.99
CLDND1-229ENST00000513988 A0A1B0GV72 72 aa2.58□□□□□ -2
CLDND1-229ENST00000513988 hDV103S1A0JD37 113 aa2.58□□□□□ -2
CLDND1-229ENST00000513988 LEPROTL1O95214 131 aa2.58□□□□□ -2
CLDND1-229ENST00000513988 NDUFAF8A1L188 74 aa2.57□□□□□ -2
CLDND1-229ENST00000513988 LINC01554Q52M75 96 aa2.57□□□□□ -2
CLDND1-229ENST00000513988 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
CLDND1-229ENST00000513988 MT1LQ93083 61 aa2.56□□□□□ -2
CLDND1-229ENST00000513988 M0QZ58 72 aa2.55□□□□□ -2
CLDND1-229ENST00000513988 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
CLDND1-229ENST00000513988 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
CLDND1-229ENST00000513988 VPS25Q9BRG1 176 aa2.54□□□□□ -2
CLDND1-229ENST00000513988 SNAPINO95295 136 aa2.52□□□□□ -2.01
CLDND1-229ENST00000513988 FABP4P15090 132 aa2.52□□□□□ -2.01
CLDND1-229ENST00000513988 MMP24-AS1A0A0U1RRL7 71 aa2.51□□□□□ -2.01
CLDND1-229ENST00000513988 A0A087WVE0 104 aa2.5□□□□□ -2.01
CLDND1-229ENST00000513988 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
CLDND1-229ENST00000513988 HCG22E2RYF7 251 aa2.49□□□□□ -2.01
CLDND1-229ENST00000513988 COA6Q5JTJ3 125 aaKnown RBP2.48□□□□□ -2.01
CLDND1-229ENST00000513988 PSPHP1O15172 72 aa2.47□□□□□ -2.01
CLDND1-229ENST00000513988 NDUFC1O43677 76 aa2.47□□□□□ -2.01
CLDND1-229ENST00000513988 PSMB2P49721 201 aa2.47□□□□□ -2.01
CLDND1-229ENST00000513988 Q6ZQT0 140 aa2.47□□□□□ -2.01
CLDND1-229ENST00000513988 H0YGX0 51 aa2.46□□□□□ -2.02
CLDND1-229ENST00000513988 CXCL6P80162 114 aa2.46□□□□□ -2.02
CLDND1-229ENST00000513988 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
CLDND1-229ENST00000513988 TSTD3H0UI37 97 aa2.43□□□□□ -2.02
CLDND1-229ENST00000513988 SCGB1A1P11684 91 aa2.43□□□□□ -2.02
CLDND1-229ENST00000513988 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
CLDND1-229ENST00000513988 A0A1B0GX51 115 aa2.42□□□□□ -2.02
CLDND1-229ENST00000513988 P0C880 135 aa2.42□□□□□ -2.02
CLDND1-229ENST00000513988 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
CLDND1-229ENST00000513988 BATFQ16520 125 aa2.42□□□□□ -2.02
CLDND1-229ENST00000513988 SMIM20Q8N5G0 67 aa2.42□□□□□ -2.02
CLDND1-229ENST00000513988 SYS1-DBNDD2H3BUS1 97 aa2.4□□□□□ -2.03
CLDND1-229ENST00000513988 A0A1W2PPM0 123 aa2.39□□□□□ -2.03
CLDND1-229ENST00000513988 H3BQ85 93 aa2.39□□□□□ -2.03
CLDND1-229ENST00000513988 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
CLDND1-229ENST00000513988 A8MU10 97 aa2.38□□□□□ -2.03
CLDND1-229ENST00000513988 MP68P56378 58 aa2.38□□□□□ -2.03
CLDND1-229ENST00000513988 CAMK2N1Q7Z7J9 78 aa2.38□□□□□ -2.03
CLDND1-229ENST00000513988 TMEM256-PLSCR3K7ERE1 68 aa2.37□□□□□ -2.03
CLDND1-229ENST00000513988 S100A1P23297 94 aa2.37□□□□□ -2.03
CLDND1-229ENST00000513988 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
CLDND1-229ENST00000513988 YPEL4Q96NS1 127 aa2.37□□□□□ -2.03
CLDND1-229ENST00000513988 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
CLDND1-229ENST00000513988 A0A0D9SG42 100 aa2.36□□□□□ -2.03
CLDND1-229ENST00000513988 DNAL4O96015 105 aa2.36□□□□□ -2.03
CLDND1-229ENST00000513988 MT-ATP8P03928 68 aa2.36□□□□□ -2.03
CLDND1-229ENST00000513988 SCGB1C2P0DMR2 95 aa2.36□□□□□ -2.03
CLDND1-229ENST00000513988 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
CLDND1-229ENST00000513988 TMEM218A2RU14 115 aa2.34□□□□□ -2.03
CLDND1-229ENST00000513988 C9JAW5 83 aa2.32□□□□□ -2.04
CLDND1-229ENST00000513988 RPS28P62857 69 aaKnown RBP2.31□□□□□ -2.04
CLDND1-229ENST00000513988 CASC2Q6XLA1 102 aa2.31□□□□□ -2.04
CLDND1-229ENST00000513988 NAA38Q9BRA0 125 aaKnown RBP2.31□□□□□ -2.04
CLDND1-229ENST00000513988 BPY2O14599 106 aa2.29□□□□□ -2.04
CLDND1-229ENST00000513988 CEND1Q8N111 149 aa2.29□□□□□ -2.04
CLDND1-229ENST00000513988 NREPQ16612 68 aa2.28□□□□□ -2.04
CLDND1-229ENST00000513988 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
CLDND1-229ENST00000513988 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
CLDND1-229ENST00000513988 A0A1B0GW54 56 aa2.27□□□□□ -2.05
CLDND1-229ENST00000513988 A0A1B0GV90 55 aa2.26□□□□□ -2.05
CLDND1-229ENST00000513988 K7EP34 96 aa2.26□□□□□ -2.05
CLDND1-229ENST00000513988 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
CLDND1-229ENST00000513988 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CLDND1-229ENST00000513988 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
CLDND1-229ENST00000513988 S100A2P29034 98 aa2.25□□□□□ -2.05
CLDND1-229ENST00000513988 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
CLDND1-229ENST00000513988 ATOH7Q8N100 152 aa2.25□□□□□ -2.05
CLDND1-229ENST00000513988 KRTDAPP60985 99 aa2.23□□□□□ -2.05
CLDND1-229ENST00000513988 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
CLDND1-229ENST00000513988 DLEU1O43261 78 aa2.22□□□□□ -2.05
CLDND1-229ENST00000513988 CYP4F30PQ9H0H9 118 aa2.21□□□□□ -2.06
CLDND1-229ENST00000513988 K7ERS5 55 aa2.2□□□□□ -2.06
CLDND1-229ENST00000513988 ACYP1P07311 99 aa2.2□□□□□ -2.06
CLDND1-229ENST00000513988 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
CLDND1-229ENST00000513988 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BOP23527 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BBP33778 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BDP58876 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BCP62807 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST2H2BEQ16778 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.18□□□□□ -2.06
CLDND1-229ENST00000513988 Q8N9L7 120 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BHQ93079 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BNQ99877 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 HIST1H2BMQ99879 126 aa2.18□□□□□ -2.06
CLDND1-229ENST00000513988 MT1AP04731 61 aa2.17□□□□□ -2.06
CLDND1-229ENST00000513988 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
CLDND1-229ENST00000513988 PRO1854Q9UHT4 67 aa2.17□□□□□ -2.06
CLDND1-229ENST00000513988 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
CLDND1-229ENST00000513988 TAX1BP3O14907 124 aa2.16□□□□□ -2.06
CLDND1-229ENST00000513988 CLLU1Q5K131 121 aa2.16□□□□□ -2.06
CLDND1-229ENST00000513988 K7ERU9 68 aa2.15□□□□□ -2.07
CLDND1-229ENST00000513988 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
CLDND1-229ENST00000513988 A6NED7 52 aa2.14□□□□□ -2.07
CLDND1-229ENST00000513988 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
CLDND1-229ENST00000513988 HIST1H4AP62805 103 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms