RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 PRO1854Q9UHT4 67 aa4.51□□□□□ -1.69
CLDND1-227ENST00000513452 RBM3P98179 157 aaKnown RBP4.5□□□□□ -1.69
CLDND1-227ENST00000513452 Q6ZQT0 140 aa4.5□□□□□ -1.69
CLDND1-227ENST00000513452 NDUFS5O43920 106 aa4.49□□□□□ -1.69
CLDND1-227ENST00000513452 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
CLDND1-227ENST00000513452 MRPL34Q9BQ48 92 aaKnown RBP4.49□□□□□ -1.69
CLDND1-227ENST00000513452 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
CLDND1-227ENST00000513452 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
CLDND1-227ENST00000513452 S4R3F8 94 aa4.48□□□□□ -1.69
CLDND1-227ENST00000513452 FXYD2P54710 66 aa4.47□□□□□ -1.69
CLDND1-227ENST00000513452 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
CLDND1-227ENST00000513452 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
CLDND1-227ENST00000513452 COX6CP09669 75 aa4.45□□□□□ -1.7
CLDND1-227ENST00000513452 SCGB1C2P0DMR2 95 aa4.45□□□□□ -1.7
CLDND1-227ENST00000513452 Q5W150 140 aa4.45□□□□□ -1.7
CLDND1-227ENST00000513452 LCA10Q71F78 164 aa4.45□□□□□ -1.7
CLDND1-227ENST00000513452 C9JAW5 83 aa4.44□□□□□ -1.7
CLDND1-227ENST00000513452 PSMB2P49721 201 aa4.44□□□□□ -1.7
CLDND1-227ENST00000513452 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
CLDND1-227ENST00000513452 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
CLDND1-227ENST00000513452 ATXN8Q156A1 80 aa4.42□□□□□ -1.7
CLDND1-227ENST00000513452 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
CLDND1-227ENST00000513452 K7ERJ3 54 aa4.41□□□□□ -1.7
CLDND1-227ENST00000513452 NAA38Q9BRA0 125 aaKnown RBP4.41□□□□□ -1.7
CLDND1-227ENST00000513452 MT1XP80297 61 aa4.4□□□□□ -1.71
CLDND1-227ENST00000513452 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
CLDND1-227ENST00000513452 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
CLDND1-227ENST00000513452 K7EQZ3 153 aa4.39□□□□□ -1.71
CLDND1-227ENST00000513452 ACYP1P07311 99 aa4.39□□□□□ -1.71
CLDND1-227ENST00000513452 H3BT86 120 aa4.37□□□□□ -1.71
CLDND1-227ENST00000513452 FAM240AA0A1B0GVK7 77 aa4.36□□□□□ -1.71
CLDND1-227ENST00000513452 C1orf64Q8NEQ6 169 aa4.36□□□□□ -1.71
CLDND1-227ENST00000513452 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
CLDND1-227ENST00000513452 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
CLDND1-227ENST00000513452 A0A1B0GW54 56 aa4.34□□□□□ -1.71
CLDND1-227ENST00000513452 BAALC-AS2P0C853 105 aa4.34□□□□□ -1.71
CLDND1-227ENST00000513452 NREPQ16612 68 aa4.33□□□□□ -1.72
CLDND1-227ENST00000513452 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
CLDND1-227ENST00000513452 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
CLDND1-227ENST00000513452 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
CLDND1-227ENST00000513452 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
CLDND1-227ENST00000513452 JMJD7-PLA2G4BH0Y9G9 81 aa4.28□□□□□ -1.72
CLDND1-227ENST00000513452 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
CLDND1-227ENST00000513452 PDE6GP18545 87 aa4.27□□□□□ -1.73
CLDND1-227ENST00000513452 CXCL6P80162 114 aa4.27□□□□□ -1.73
CLDND1-227ENST00000513452 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
CLDND1-227ENST00000513452 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
CLDND1-227ENST00000513452 A8MUN3 132 aa4.26□□□□□ -1.73
CLDND1-227ENST00000513452 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
CLDND1-227ENST00000513452 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
CLDND1-227ENST00000513452 Q8N9L7 120 aa4.23□□□□□ -1.73
CLDND1-227ENST00000513452 A0A087WVE0 104 aa4.22□□□□□ -1.73
CLDND1-227ENST00000513452 ATOX1O00244 68 aa4.22□□□□□ -1.73
CLDND1-227ENST00000513452 BPY2O14599 106 aa4.22□□□□□ -1.73
CLDND1-227ENST00000513452 UQCRQO14949 82 aa4.22□□□□□ -1.73
CLDND1-227ENST00000513452 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
CLDND1-227ENST00000513452 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
CLDND1-227ENST00000513452 H0YAA0 97 aa4.18□□□□□ -1.74
CLDND1-227ENST00000513452 V9GYY9 64 aa4.18□□□□□ -1.74
CLDND1-227ENST00000513452 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
CLDND1-227ENST00000513452 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CLDND1-227ENST00000513452 COX7CP15954 63 aa4.16□□□□□ -1.74
CLDND1-227ENST00000513452 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
CLDND1-227ENST00000513452 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
CLDND1-227ENST00000513452 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
CLDND1-227ENST00000513452 TMEM258P61165 79 aa4.14□□□□□ -1.75
CLDND1-227ENST00000513452 SERP2Q8N6R1 65 aa4.13□□□□□ -1.75
CLDND1-227ENST00000513452 UBL5Q9BZL1 73 aa4.13□□□□□ -1.75
CLDND1-227ENST00000513452 NDUFC1O43677 76 aa4.12□□□□□ -1.75
CLDND1-227ENST00000513452 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
CLDND1-227ENST00000513452 R4GN34 69 aa4.09□□□□□ -1.75
CLDND1-227ENST00000513452 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
CLDND1-227ENST00000513452 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
CLDND1-227ENST00000513452 MT4P47944 62 aa4.06□□□□□ -1.76
CLDND1-227ENST00000513452 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
CLDND1-227ENST00000513452 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
CLDND1-227ENST00000513452 M0QZ58 72 aa4.05□□□□□ -1.76
CLDND1-227ENST00000513452 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
CLDND1-227ENST00000513452 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
CLDND1-227ENST00000513452 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
CLDND1-227ENST00000513452 TP53AIP1Q9HCN2 124 aa4.04□□□□□ -1.76
CLDND1-227ENST00000513452 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
CLDND1-227ENST00000513452 P0C880 135 aa4.01□□□□□ -1.77
CLDND1-227ENST00000513452 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
CLDND1-227ENST00000513452 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
CLDND1-227ENST00000513452 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
CLDND1-227ENST00000513452 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
CLDND1-227ENST00000513452 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
CLDND1-227ENST00000513452 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
CLDND1-227ENST00000513452 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
CLDND1-227ENST00000513452 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
CLDND1-227ENST00000513452 MT1EP04732 61 aa3.93□□□□□ -1.78
CLDND1-227ENST00000513452 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CLDND1-227ENST00000513452 H7BZZ5 65 aa3.91□□□□□ -1.78
CLDND1-227ENST00000513452 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CLDND1-227ENST00000513452 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
CLDND1-227ENST00000513452 H3BPC8 53 aa3.85□□□□□ -1.79
CLDND1-227ENST00000513452 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
CLDND1-227ENST00000513452 MP68P56378 58 aa3.84□□□□□ -1.79
CLDND1-227ENST00000513452 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms