RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 NOP10Q9NPE3 64 aaKnown RBP0.71□□□□□ -2.3
AP001960.1-201ENST00000506494 ANK2Q01484 3957 aa0.71□□□□□ -2.3
AP001960.1-201ENST00000506494 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 H0YAA0 97 aa0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 APLNQ9ULZ1 77 aa0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 SPENQ96T58 3664 aaKnown RBP0.7□□□□□ -2.3
AP001960.1-201ENST00000506494 CNOT1A5YKK6 2376 aaKnown RBP0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 FAM186AA6NE01 2351 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 MTORP42345 2549 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 KRTAP20-1Q3LI63 56 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 CSMD2Q7Z408 3487 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 PKDREJQ9NTG1 2253 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
AP001960.1-201ENST00000506494 SPTA1P02549 2419 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 AKAP9Q99996 3911 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 IGLV5-48A0A075B6I7 105 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 SPRR1BP22528 89 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 WT1-ASQ06250 92 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 WFDC10BQ8IUB3 73 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
AP001960.1-201ENST00000506494 EP300Q09472 2414 aaPredicted RBP0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 H0YGG7 62 aa0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 RPS27P42677 84 aaKnown RBP0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 RPS27LQ71UM5 84 aaKnown RBP0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 CUBNO60494 3623 aa0.67□□□□□ -2.3
AP001960.1-201ENST00000506494 DEFB130BP0DP73 79 aa0.66□□□□□ -2.3
AP001960.1-201ENST00000506494 DEFB130AP0DP74 79 aa0.66□□□□□ -2.3
AP001960.1-201ENST00000506494 TFF3Q07654 80 aa0.66□□□□□ -2.3
AP001960.1-201ENST00000506494 VPS13CQ709C8 3753 aa0.66□□□□□ -2.3
AP001960.1-201ENST00000506494 USH2AO75445 5202 aa0.65□□□□□ -2.31
AP001960.1-201ENST00000506494 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
AP001960.1-201ENST00000506494 DEFB106AQ8N104 65 aa0.65□□□□□ -2.31
AP001960.1-201ENST00000506494 KAAG1Q9UBP8 84 aa0.65□□□□□ -2.31
AP001960.1-201ENST00000506494 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.31
AP001960.1-201ENST00000506494 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 COL7A1Q02388 2944 aa0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 A8MTW9 85 aa0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 LOC730098B7Z3J9 87 aa0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
AP001960.1-201ENST00000506494 PRKDCP78527 4128 aaKnown RBP0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 MMP24-AS1A0A0U1RRL7 71 aa0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 M0QY20 66 aa0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 PRLHP81277 87 aa0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 SACSQ9NZJ4 4579 aa0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
AP001960.1-201ENST00000506494 FAT3Q8TDW7 4589 aa0.62□□□□□ -2.31
AP001960.1-201ENST00000506494 CSMD3Q7Z407 3707 aa0.62□□□□□ -2.31
AP001960.1-201ENST00000506494 POLR2KP53803 58 aaKnown RBP0.62□□□□□ -2.31
AP001960.1-201ENST00000506494 S4R3F8 94 aa0.62□□□□□ -2.31
AP001960.1-201ENST00000506494 KLK9Q2XQG4 91 aa0.61□□□□□ -2.31
AP001960.1-201ENST00000506494 LELP1Q5T871 98 aa0.61□□□□□ -2.31
AP001960.1-201ENST00000506494 ARHGAP5-AS1Q96IT6 56 aa0.61□□□□□ -2.31
AP001960.1-201ENST00000506494 ACANP16112 2415 aa0.61□□□□□ -2.31
AP001960.1-201ENST00000506494 DYNC2H1Q8NCM8 4307 aaKnown RBP0.61□□□□□ -2.31
AP001960.1-201ENST00000506494 HRNRQ86YZ3 2850 aaPredicted RBP0.6□□□□□ -2.31
AP001960.1-201ENST00000506494 NBASA2RRP1 2371 aa0.6□□□□□ -2.31
AP001960.1-201ENST00000506494 DEFB135Q30KP9 77 aa0.6□□□□□ -2.31
AP001960.1-201ENST00000506494 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
AP001960.1-201ENST00000506494 SRRM2Q9UQ35 2752 aaKnown RBP0.6□□□□□ -2.31
AP001960.1-201ENST00000506494 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
AP001960.1-201ENST00000506494 ACACAQ13085 2346 aa0.59□□□□□ -2.31
AP001960.1-201ENST00000506494 KNL1Q8NG31 2342 aa0.59□□□□□ -2.31
AP001960.1-201ENST00000506494 ANK3Q12955 4377 aaKnown RBP0.59□□□□□ -2.31
AP001960.1-201ENST00000506494 APC2O95996 2303 aa0.59□□□□□ -2.32
AP001960.1-201ENST00000506494 CSPG4Q6UVK1 2322 aa0.59□□□□□ -2.32
AP001960.1-201ENST00000506494 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 C9orf92A6NGG3 77 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 M0QZ58 72 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 M0R2T5 61 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 RPL39P62891 51 aaKnown RBP0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 PRCDQ00LT1 54 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
AP001960.1-201ENST00000506494 RPL39LQ96EH5 51 aaKnown RBP0.57□□□□□ -2.32
AP001960.1-201ENST00000506494 TOMM7Q9P0U1 55 aa0.57□□□□□ -2.32
AP001960.1-201ENST00000506494 WNK1Q9H4A3 2382 aa0.57□□□□□ -2.32
AP001960.1-201ENST00000506494 TRRAPQ9Y4A5 3859 aa0.56□□□□□ -2.32
AP001960.1-201ENST00000506494 HSPG2P98160 4391 aa0.56□□□□□ -2.32
AP001960.1-201ENST00000506494 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
AP001960.1-201ENST00000506494 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 HUWE1Q7Z6Z7 4374 aaKnown RBP0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 DNAH9Q9NYC9 4486 aa0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 LINC01590Q5TEZ4 76 aa0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 DYNC1H1Q14204 4646 aaKnown RBP0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 PLECQ15149 4684 aaKnown RBP0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 VPS13DQ5THJ4 4388 aa0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 PKHD1P08F94 4074 aa0.55□□□□□ -2.32
AP001960.1-201ENST00000506494 TNP1P09430 55 aa0.54□□□□□ -2.32
AP001960.1-201ENST00000506494 CLPSL2Q6UWE3 100 aa0.54□□□□□ -2.32
AP001960.1-201ENST00000506494 LYSTQ99698 3801 aa0.54□□□□□ -2.32
AP001960.1-201ENST00000506494 TTTY10Q9BZA0 68 aa0.54□□□□□ -2.32
AP001960.1-201ENST00000506494 HECTD4Q9Y4D8 3996 aa0.54□□□□□ -2.32
AP001960.1-201ENST00000506494 FAT2Q9NYQ8 4349 aa0.52□□□□□ -2.33
AP001960.1-201ENST00000506494 DNAH7Q8WXX0 4024 aa0.52□□□□□ -2.33
AP001960.1-201ENST00000506494 DNAH3Q8TD57 4116 aa0.52□□□□□ -2.33
AP001960.1-201ENST00000506494 DNAH2Q9P225 4427 aa0.52□□□□□ -2.33
AP001960.1-201ENST00000506494 PKD1P98161 4303 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms