RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 PRH1P02810 166 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 DEFB130BP0DP73 79 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 DEFB130AP0DP74 79 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 DEFB131AP59861 70 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 HMGN3Q15651 99 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 TNXBP22105 4242 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
TRAPPC13-208ENST00000505553 A0A087WXM4 84 aa0.9□□□□□ -2.26
TRAPPC13-208ENST00000505553 UMAD1C9J7I0 102 aa0.9□□□□□ -2.26
TRAPPC13-208ENST00000505553 PLAC8Q9NZF1 115 aa0.9□□□□□ -2.26
TRAPPC13-208ENST00000505553 NEBP20929 6669 aa0.9□□□□□ -2.27
TRAPPC13-208ENST00000505553 DNAH8Q96JB1 4490 aa0.9□□□□□ -2.27
TRAPPC13-208ENST00000505553 H3BVH4 76 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 NDUFA4O00483 81 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 COX6A2Q02221 97 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 RPL39P5Q59GN2 51 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 Q6JHZ5 121 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 LINC01600Q96MT4 127 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 RHPN1-AS1Q9BWJ2 59 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 LINC00472Q9H8W2 130 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 ABRACLQ9P1F3 81 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 C10orf113Q5VZT2 155 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 TMEM263Q8WUH6 116 aaKnown RBP0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 S100ZQ8WXG8 99 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 SPRR4Q96PI1 79 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 TTTY10Q9BZA0 68 aa0.89□□□□□ -2.27
TRAPPC13-208ENST00000505553 SSPOA2VEC9 5147 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 LPAP08519 4548 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 H0Y9P7 68 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 HTN1P15515 57 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 PIGYQ3MUY2 71 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 SSBP3-AS1Q7Z2R9 100 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 TMEM167AQ8TBQ9 72 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 UBE2D4Q9Y2X8 147 aa0.88□□□□□ -2.27
TRAPPC13-208ENST00000505553 USH2AO75445 5202 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 A0A096LPF7 62 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 A0A1B0GUT8 65 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 H3BNG1 76 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 LINC01590Q5TEZ4 76 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 CMC2Q9NRP2 79 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 LINC00846Q9NV44 126 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 GNG13Q9P2W3 67 aa0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 TIMM8BQ9Y5J9 83 aaPredicted RBP0.87□□□□□ -2.27
TRAPPC13-208ENST00000505553 TRBV6-1A0A0K0K1D8 114 aa0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 A0A1B0GU69 56 aa0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 IFI27P40305 119 aaPredicted RBP0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 SNRPGP62308 76 aaKnown RBP0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 WFDC10BQ8IUB3 73 aa0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 NOP10Q9NPE3 64 aaKnown RBP0.86□□□□□ -2.27
TRAPPC13-208ENST00000505553 M0R2T5 61 aa0.85□□□□□ -2.27
TRAPPC13-208ENST00000505553 PRCDQ00LT1 54 aa0.85□□□□□ -2.27
TRAPPC13-208ENST00000505553 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
TRAPPC13-208ENST00000505553 DEFB1P60022 68 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 LINC01556Q5JQF7 62 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 ATP5EP2Q5VTU8 51 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 CNFNQ9BYD5 112 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 PRO0255Q9UI72 69 aa0.84□□□□□ -2.27
TRAPPC13-208ENST00000505553 MUC17Q685J3 4493 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 TRAV21A0A0B4J279 112 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 TRBV7-4A0A0J9YYF1 115 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 K7EIM0 57 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 COX8AP10176 69 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 KLK9Q2XQG4 91 aa0.83□□□□□ -2.28
TRAPPC13-208ENST00000505553 A0A087WWC5 75 aa0.82□□□□□ -2.28
TRAPPC13-208ENST00000505553 I3L2K1 104 aa0.82□□□□□ -2.28
TRAPPC13-208ENST00000505553 SFTA3P0C7M3 94 aa0.82□□□□□ -2.28
TRAPPC13-208ENST00000505553 WT1-ASQ06250 92 aa0.82□□□□□ -2.28
TRAPPC13-208ENST00000505553 ATXN8Q156A1 80 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 COX6B2Q6YFQ2 88 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 NDUFB1O75438 58 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 C3orf79P0CE67 100 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 MT1HP80294 61 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 NREPQ16612 68 aa0.81□□□□□ -2.28
TRAPPC13-208ENST00000505553 FXYD6-FXYD2A0A087WZ82 144 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 LINC00959A0A1B0GUT2 108 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 A8MTW9 85 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 SPINK4O60575 86 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 ARHGAP5-AS1Q96IT6 56 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 CRIPTQ9P021 101 aa0.8□□□□□ -2.28
TRAPPC13-208ENST00000505553 COX7BP24311 80 aa0.79□□□□□ -2.28
TRAPPC13-208ENST00000505553 MUC12Q9UKN1 5478 aa0.79□□□□□ -2.28
TRAPPC13-208ENST00000505553 A0A096LNI7 61 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 SNRPGP15A8MWD9 76 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 KMT2DO14686 5537 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 CLPSL2Q6UWE3 100 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
TRAPPC13-208ENST00000505553 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
TRAPPC13-208ENST00000505553 LINC01549A6NIU2 74 aa0.77□□□□□ -2.29
TRAPPC13-208ENST00000505553 ENHOQ6UWT2 76 aa0.77□□□□□ -2.29
TRAPPC13-208ENST00000505553 TP53AIP1Q9HCN2 124 aa0.77□□□□□ -2.29
TRAPPC13-208ENST00000505553 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
TRAPPC13-208ENST00000505553 FCER1GP30273 86 aa0.75□□□□□ -2.29
TRAPPC13-208ENST00000505553 I3L3M4 83 aa0.74□□□□□ -2.29
TRAPPC13-208ENST00000505553 KRTAP19-2Q3LHN2 52 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms