RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 H7BZZ5 65 aa5.41□□□□□ -1.54
TPM3-217ENST00000504663 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
TPM3-217ENST00000504663 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.54
TPM3-217ENST00000504663 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
TPM3-217ENST00000504663 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
TPM3-217ENST00000504663 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
TPM3-217ENST00000504663 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
TPM3-217ENST00000504663 V9GYY9 64 aa5.38□□□□□ -1.55
TPM3-217ENST00000504663 HRES1P13985 223 aa5.37□□□□□ -1.55
TPM3-217ENST00000504663 SPINK7P58062 85 aa5.37□□□□□ -1.55
TPM3-217ENST00000504663 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
TPM3-217ENST00000504663 NDUFC1O43677 76 aa5.33□□□□□ -1.56
TPM3-217ENST00000504663 MUC2Q02817 5179 aa5.32□□□□□ -1.56
TPM3-217ENST00000504663 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
TPM3-217ENST00000504663 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
TPM3-217ENST00000504663 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
TPM3-217ENST00000504663 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
TPM3-217ENST00000504663 TMEM258P61165 79 aa5.28□□□□□ -1.56
TPM3-217ENST00000504663 C4orf26Q17RF5 130 aa5.27□□□□□ -1.57
TPM3-217ENST00000504663 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
TPM3-217ENST00000504663 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
TPM3-217ENST00000504663 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
TPM3-217ENST00000504663 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
TPM3-217ENST00000504663 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
TPM3-217ENST00000504663 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
TPM3-217ENST00000504663 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
TPM3-217ENST00000504663 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
TPM3-217ENST00000504663 A8MUN3 132 aa5.17□□□□□ -1.58
TPM3-217ENST00000504663 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
TPM3-217ENST00000504663 COA5Q86WW8 74 aa5.14□□□□□ -1.59
TPM3-217ENST00000504663 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
TPM3-217ENST00000504663 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
TPM3-217ENST00000504663 ACYP2P14621 99 aa5.11□□□□□ -1.59
TPM3-217ENST00000504663 SERP1Q9Y6X1 66 aa5.11□□□□□ -1.59
TPM3-217ENST00000504663 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
TPM3-217ENST00000504663 LCA10Q71F78 164 aa5.08□□□□□ -1.6
TPM3-217ENST00000504663 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
TPM3-217ENST00000504663 S4R3F8 94 aa5.05□□□□□ -1.6
TPM3-217ENST00000504663 MT1HP80294 61 aa5.04□□□□□ -1.6
TPM3-217ENST00000504663 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
TPM3-217ENST00000504663 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
TPM3-217ENST00000504663 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
TPM3-217ENST00000504663 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
TPM3-217ENST00000504663 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
TPM3-217ENST00000504663 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
TPM3-217ENST00000504663 Q1T7F1 81 aa4.91□□□□□ -1.62
TPM3-217ENST00000504663 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
TPM3-217ENST00000504663 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
TPM3-217ENST00000504663 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
TPM3-217ENST00000504663 H0YAA0 97 aa4.88□□□□□ -1.63
TPM3-217ENST00000504663 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
TPM3-217ENST00000504663 PSPHP1O15172 72 aa4.84□□□□□ -1.63
TPM3-217ENST00000504663 P0C880 135 aa4.84□□□□□ -1.63
TPM3-217ENST00000504663 MT2AP02795 61 aa4.83□□□□□ -1.64
TPM3-217ENST00000504663 Q5VV11 94 aa4.82□□□□□ -1.64
TPM3-217ENST00000504663 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
TPM3-217ENST00000504663 MT1FP04733 61 aa4.81□□□□□ -1.64
TPM3-217ENST00000504663 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
TPM3-217ENST00000504663 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
TPM3-217ENST00000504663 M0R2T5 61 aa4.8□□□□□ -1.64
TPM3-217ENST00000504663 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
TPM3-217ENST00000504663 A0A1B0GU69 56 aa4.79□□□□□ -1.64
TPM3-217ENST00000504663 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
TPM3-217ENST00000504663 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
TPM3-217ENST00000504663 A0A1B0GU33 70 aa4.69□□□□□ -1.66
TPM3-217ENST00000504663 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
TPM3-217ENST00000504663 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
TPM3-217ENST00000504663 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
TPM3-217ENST00000504663 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
TPM3-217ENST00000504663 A8MU10 97 aa4.64□□□□□ -1.67
TPM3-217ENST00000504663 M0QZ58 72 aa4.63□□□□□ -1.67
TPM3-217ENST00000504663 UQCR11O14957 56 aa4.63□□□□□ -1.67
TPM3-217ENST00000504663 A6NED7 52 aa4.6□□□□□ -1.67
TPM3-217ENST00000504663 R4GN34 69 aa4.6□□□□□ -1.67
TPM3-217ENST00000504663 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
TPM3-217ENST00000504663 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
TPM3-217ENST00000504663 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
TPM3-217ENST00000504663 CDC42SE1Q9NRR8 79 aa4.57□□□□□ -1.68
TPM3-217ENST00000504663 USH2AO75445 5202 aa4.56□□□□□ -1.68
TPM3-217ENST00000504663 MT1BP07438 61 aa4.55□□□□□ -1.68
TPM3-217ENST00000504663 A0A0D9SG42 100 aa4.53□□□□□ -1.68
TPM3-217ENST00000504663 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
TPM3-217ENST00000504663 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
TPM3-217ENST00000504663 A6NN06 94 aa4.51□□□□□ -1.69
TPM3-217ENST00000504663 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
TPM3-217ENST00000504663 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
TPM3-217ENST00000504663 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
TPM3-217ENST00000504663 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
TPM3-217ENST00000504663 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
TPM3-217ENST00000504663 MT1XP80297 61 aa4.36□□□□□ -1.71
TPM3-217ENST00000504663 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
TPM3-217ENST00000504663 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
TPM3-217ENST00000504663 K7ERS5 55 aa4.33□□□□□ -1.72
TPM3-217ENST00000504663 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
TPM3-217ENST00000504663 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
TPM3-217ENST00000504663 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
TPM3-217ENST00000504663 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
TPM3-217ENST00000504663 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.73
TPM3-217ENST00000504663 ROMO1P60602 79 aa4.21□□□□□ -1.74
TPM3-217ENST00000504663 MT3P25713 68 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms