RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
PDLIM1P4-201ENST00000504327 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
PDLIM1P4-201ENST00000504327 BCE1O60756 84 aa2.14□□□□□ -2.07
PDLIM1P4-201ENST00000504327 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
PDLIM1P4-201ENST00000504327 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
PDLIM1P4-201ENST00000504327 A0A1W2PPM0 123 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 H7BZZ5 65 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 INE1O15225 51 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 SMIM13P0DJ93 91 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 Q5VV11 94 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 UNQ6190/PRO20217Q6UXQ8 127 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 LINC00308Q8TCZ7 52 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 CRCT1Q9UGL9 99 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
PDLIM1P4-201ENST00000504327 KLKP1Q107X0 134 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 BVES-AS1Q5T3Y7 98 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 MUSTN1Q8IVN3 82 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 C6orf48Q9UBA6 75 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 SNURFQ9Y675 71 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
PDLIM1P4-201ENST00000504327 H0YGX0 51 aa2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 RPL37AP61513 92 aaKnown RBP2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 Q6ZSA8 131 aa2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
PDLIM1P4-201ENST00000504327 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
PDLIM1P4-201ENST00000504327 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
PDLIM1P4-201ENST00000504327 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
PDLIM1P4-201ENST00000504327 ACYP1P07311 99 aa2.1□□□□□ -2.07
PDLIM1P4-201ENST00000504327 HAMPP81172 84 aa2.1□□□□□ -2.07
PDLIM1P4-201ENST00000504327 SPAG11AQ6PDA7 123 aa2.09□□□□□ -2.07
PDLIM1P4-201ENST00000504327 KCNQ1DNQ9H478 68 aa2.09□□□□□ -2.07
PDLIM1P4-201ENST00000504327 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
PDLIM1P4-201ENST00000504327 LOC110117498A0A087WWA1 95 aa2.08□□□□□ -2.08
PDLIM1P4-201ENST00000504327 SMR3BP02814 79 aaPredicted RBP2.08□□□□□ -2.08
PDLIM1P4-201ENST00000504327 ATXN8Q156A1 80 aa2.08□□□□□ -2.08
PDLIM1P4-201ENST00000504327 LINC01600Q96MT4 127 aa2.08□□□□□ -2.08
PDLIM1P4-201ENST00000504327 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 IGKV3D-7A0A0C4DH55 119 aa2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 Q5VSD8 79 aa2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
PDLIM1P4-201ENST00000504327 A0A096LNI7 61 aa2.06□□□□□ -2.08
PDLIM1P4-201ENST00000504327 ETDCA0A1B0GVM5 59 aa2.06□□□□□ -2.08
PDLIM1P4-201ENST00000504327 H3BUT2 72 aa2.06□□□□□ -2.08
PDLIM1P4-201ENST00000504327 SMIM11BQ8TCY0 68 aa2.06□□□□□ -2.08
PDLIM1P4-201ENST00000504327 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
PDLIM1P4-201ENST00000504327 NCR3O14931 201 aa2.05□□□□□ -2.08
PDLIM1P4-201ENST00000504327 COX7BP24311 80 aa2.05□□□□□ -2.08
PDLIM1P4-201ENST00000504327 SPRR1AP35321 89 aa2.05□□□□□ -2.08
PDLIM1P4-201ENST00000504327 Q6ZRX8 168 aa2.05□□□□□ -2.08
PDLIM1P4-201ENST00000504327 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
PDLIM1P4-201ENST00000504327 LINC00575Q6W349 94 aa2.04□□□□□ -2.08
PDLIM1P4-201ENST00000504327 F8WEM9 126 aa2.02□□□□□ -2.09
PDLIM1P4-201ENST00000504327 IGLV5-48A0A075B6I7 105 aa2.01□□□□□ -2.09
PDLIM1P4-201ENST00000504327 IGKV4-1P06312 121 aa2.01□□□□□ -2.09
PDLIM1P4-201ENST00000504327 Q6JHZ5 121 aa2.01□□□□□ -2.09
PDLIM1P4-201ENST00000504327 SPINK6Q6UWN8 80 aa2.01□□□□□ -2.09
PDLIM1P4-201ENST00000504327 LINC00208Q96KT6 92 aa2.01□□□□□ -2.09
PDLIM1P4-201ENST00000504327 TNXBP22105 4242 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 UQCR11O14957 56 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 SPRR1BP22528 89 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 Q6ZQY7 126 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 KRTAP13-1Q8IUC0 172 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 SSPOA2VEC9 5147 aa2□□□□□ -2.09
PDLIM1P4-201ENST00000504327 LRP2P98164 4655 aa1.99□□□□□ -2.09
PDLIM1P4-201ENST00000504327 OBSCN-AS1Q96MR7 158 aa1.99□□□□□ -2.09
PDLIM1P4-201ENST00000504327 MT1HL1P0DM35 61 aa1.98□□□□□ -2.09
PDLIM1P4-201ENST00000504327 PRLHP81277 87 aa1.98□□□□□ -2.09
PDLIM1P4-201ENST00000504327 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
PDLIM1P4-201ENST00000504327 SPRR4Q96PI1 79 aa1.98□□□□□ -2.09
PDLIM1P4-201ENST00000504327 TRBV7-4A0A0J9YYF1 115 aa1.97□□□□□ -2.09
PDLIM1P4-201ENST00000504327 DEFB105AQ8NG35 78 aa1.97□□□□□ -2.09
PDLIM1P4-201ENST00000504327 PRR15LQ9BU68 103 aa1.97□□□□□ -2.09
PDLIM1P4-201ENST00000504327 UBL5Q9BZL1 73 aa1.96□□□□□ -2.1
PDLIM1P4-201ENST00000504327 SPINK1P00995 79 aa1.95□□□□□ -2.1
PDLIM1P4-201ENST00000504327 RPS29P62273 56 aaKnown RBP1.95□□□□□ -2.1
PDLIM1P4-201ENST00000504327 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
PDLIM1P4-201ENST00000504327 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
PDLIM1P4-201ENST00000504327 NREPQ16612 68 aa1.94□□□□□ -2.1
PDLIM1P4-201ENST00000504327 Q96NJ1 140 aa1.94□□□□□ -2.1
PDLIM1P4-201ENST00000504327 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
PDLIM1P4-201ENST00000504327 ACYP2P14621 99 aa1.93□□□□□ -2.1
PDLIM1P4-201ENST00000504327 NDUFB1O75438 58 aa1.92□□□□□ -2.1
PDLIM1P4-201ENST00000504327 LPAP08519 4548 aa1.92□□□□□ -2.1
PDLIM1P4-201ENST00000504327 A0A087WVE0 104 aa1.91□□□□□ -2.1
PDLIM1P4-201ENST00000504327 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
PDLIM1P4-201ENST00000504327 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PDLIM1P4-201ENST00000504327 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
PDLIM1P4-201ENST00000504327 NEBP20929 6669 aa1.88□□□□□ -2.11
PDLIM1P4-201ENST00000504327 LINC00472Q9H8W2 130 aa1.88□□□□□ -2.11
PDLIM1P4-201ENST00000504327 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
PDLIM1P4-201ENST00000504327 ZCCHC13Q8WW36 166 aaKnown RBP1.87□□□□□ -2.11
PDLIM1P4-201ENST00000504327 H0Y9P7 68 aa1.86□□□□□ -2.11
PDLIM1P4-201ENST00000504327 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
PDLIM1P4-201ENST00000504327 TP53AIP1Q9HCN2 124 aa1.86□□□□□ -2.11
PDLIM1P4-201ENST00000504327 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms