RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.96□□□□□ -2.1
USP54-217ENST00000498213 C14orf132Q9NPU4 83 aa1.96□□□□□ -2.1
USP54-217ENST00000498213 A0A0G2JQZ4 141 aa1.95□□□□□ -2.1
USP54-217ENST00000498213 H3BQ85 93 aa1.95□□□□□ -2.1
USP54-217ENST00000498213 DEFB105AQ8NG35 78 aa1.95□□□□□ -2.1
USP54-217ENST00000498213 RBM12B-AS1Q9P1G2 102 aa1.95□□□□□ -2.1
USP54-217ENST00000498213 A8MUU9 505 aa1.94□□□□□ -2.1
USP54-217ENST00000498213 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
USP54-217ENST00000498213 SMIM20Q8N5G0 67 aa1.94□□□□□ -2.1
USP54-217ENST00000498213 LOC110117498A0A087WWA1 95 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 TRBV7-4A0A0J9YYF1 115 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 A0A1W2PNM2 257 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 ACYP1P07311 99 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 HRCT1Q6UXD1 115 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 Q6ZQT0 140 aa1.93□□□□□ -2.1
USP54-217ENST00000498213 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 FAM240AA0A1B0GVK7 77 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 JMJD7-PLA2G4BH0Y9G9 81 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 CCKP06307 115 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 RPS28P62857 69 aaKnown RBP1.92□□□□□ -2.1
USP54-217ENST00000498213 RBM3P98179 157 aaKnown RBP1.92□□□□□ -2.1
USP54-217ENST00000498213 IGFL1Q6UW32 110 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 IMUPQ9GZP8 106 aa1.92□□□□□ -2.1
USP54-217ENST00000498213 A8MWP4 228 aa1.91□□□□□ -2.1
USP54-217ENST00000498213 UQCRQO14949 82 aa1.91□□□□□ -2.1
USP54-217ENST00000498213 MT-ATP8P03928 68 aa1.91□□□□□ -2.1
USP54-217ENST00000498213 TMEM258P61165 79 aa1.91□□□□□ -2.1
USP54-217ENST00000498213 Q96NJ1 140 aa1.91□□□□□ -2.1
USP54-217ENST00000498213 ATOX1O00244 68 aa1.9□□□□□ -2.11
USP54-217ENST00000498213 SPRR2DP22532 72 aa1.9□□□□□ -2.11
USP54-217ENST00000498213 V9GYY9 64 aa1.9□□□□□ -2.11
USP54-217ENST00000498213 FAM236DA0A1B0GTK5 79 aa1.89□□□□□ -2.11
USP54-217ENST00000498213 FAM236CP0DP71 79 aa1.89□□□□□ -2.11
USP54-217ENST00000498213 LINC00313P59037 77 aa1.89□□□□□ -2.11
USP54-217ENST00000498213 DSCR8Q96T75 97 aa1.89□□□□□ -2.11
USP54-217ENST00000498213 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
USP54-217ENST00000498213 IGKV3D-7A0A0C4DH55 119 aa1.88□□□□□ -2.11
USP54-217ENST00000498213 A0A1B0GW54 56 aa1.88□□□□□ -2.11
USP54-217ENST00000498213 C8orf87E5RJ46 101 aa1.88□□□□□ -2.11
USP54-217ENST00000498213 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
USP54-217ENST00000498213 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
USP54-217ENST00000498213 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
USP54-217ENST00000498213 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
USP54-217ENST00000498213 A0A087WSZ3 146 aa1.87□□□□□ -2.11
USP54-217ENST00000498213 A6NN06 94 aa1.87□□□□□ -2.11
USP54-217ENST00000498213 PDE6GP18545 87 aa1.87□□□□□ -2.11
USP54-217ENST00000498213 LINC00643Q86TS7 51 aa1.87□□□□□ -2.11
USP54-217ENST00000498213 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
USP54-217ENST00000498213 A0A087WVE0 104 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 BPY2O14599 106 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 HRES1P13985 223 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 DEFB116Q30KQ4 102 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 ATP5EP2Q5VTU8 51 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
USP54-217ENST00000498213 FAM236AA0A1B0GUQ0 79 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 FAM236BA0A1B0GV22 79 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 NDUFC1O43677 76 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 COX7CP15954 63 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 SEC61GP60059 68 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 NREPQ16612 68 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 LINC00472Q9H8W2 130 aa1.85□□□□□ -2.11
USP54-217ENST00000498213 CCDC179H3BU77 68 aa1.84□□□□□ -2.11
USP54-217ENST00000498213 K7EQZ3 153 aa1.84□□□□□ -2.11
USP54-217ENST00000498213 HIST1H4AP62805 103 aaKnown RBP1.84□□□□□ -2.11
USP54-217ENST00000498213 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
USP54-217ENST00000498213 SMIM26A0A096LP01 95 aa1.83□□□□□ -2.12
USP54-217ENST00000498213 NDUFB1O75438 58 aa1.83□□□□□ -2.12
USP54-217ENST00000498213 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
USP54-217ENST00000498213 SERP2Q8N6R1 65 aa1.83□□□□□ -2.12
USP54-217ENST00000498213 ZCCHC13Q8WW36 166 aaKnown RBP1.83□□□□□ -2.12
USP54-217ENST00000498213 SERP1Q9Y6X1 66 aa1.83□□□□□ -2.12
USP54-217ENST00000498213 MMP24-AS1A0A0U1RRL7 71 aa1.82□□□□□ -2.12
USP54-217ENST00000498213 SPINK7P58062 85 aa1.82□□□□□ -2.12
USP54-217ENST00000498213 A0A1B0GVX0 72 aa1.81□□□□□ -2.12
USP54-217ENST00000498213 PRR15Q8IV56 129 aa1.81□□□□□ -2.12
USP54-217ENST00000498213 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
USP54-217ENST00000498213 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
USP54-217ENST00000498213 IGHV6-1A0A0B4J1U7 121 aa1.79□□□□□ -2.12
USP54-217ENST00000498213 HCG22E2RYF7 251 aa1.79□□□□□ -2.12
USP54-217ENST00000498213 CYSTM1Q9H1C7 97 aa1.79□□□□□ -2.12
USP54-217ENST00000498213 C8orf17Q9NRJ1 99 aa1.79□□□□□ -2.12
USP54-217ENST00000498213 PMAIP1Q13794 54 aa1.78□□□□□ -2.12
USP54-217ENST00000498213 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
USP54-217ENST00000498213 CRIPTQ9P021 101 aa1.78□□□□□ -2.12
USP54-217ENST00000498213 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
USP54-217ENST00000498213 hDV103S1A0JD37 113 aa1.77□□□□□ -2.13
USP54-217ENST00000498213 NDUFS5O43920 106 aa1.76□□□□□ -2.13
USP54-217ENST00000498213 Q5W150 140 aa1.76□□□□□ -2.13
USP54-217ENST00000498213 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
USP54-217ENST00000498213 MRPL34Q9BQ48 92 aaKnown RBP1.76□□□□□ -2.13
USP54-217ENST00000498213 KLKP1Q107X0 134 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 C4orf26Q17RF5 130 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 Q5VV11 94 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 C20orf197Q8N268 126 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
USP54-217ENST00000498213 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 622.8 ms