RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MT1BP07438 61 aa6.45□□□□□ -1.38
VTI1A-209ENST00000496445 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
VTI1A-209ENST00000496445 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
VTI1A-209ENST00000496445 GTF2H5Q6ZYL4 71 aa6.44□□□□□ -1.38
VTI1A-209ENST00000496445 ETDBQ3ZM63 59 aa6.43□□□□□ -1.38
VTI1A-209ENST00000496445 F8W1H4 67 aa6.42□□□□□ -1.38
VTI1A-209ENST00000496445 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
VTI1A-209ENST00000496445 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
VTI1A-209ENST00000496445 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
VTI1A-209ENST00000496445 Q5VV11 94 aa6.39□□□□□ -1.39
VTI1A-209ENST00000496445 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
VTI1A-209ENST00000496445 NEBP20929 6669 aa6.37□□□□□ -1.39
VTI1A-209ENST00000496445 A0A087WVE0 104 aa6.36□□□□□ -1.39
VTI1A-209ENST00000496445 A6NN06 94 aa6.36□□□□□ -1.39
VTI1A-209ENST00000496445 KLKP1Q107X0 134 aa6.35□□□□□ -1.39
VTI1A-209ENST00000496445 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
VTI1A-209ENST00000496445 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
VTI1A-209ENST00000496445 LOC101927531A0A1B0GV80 90 aa6.32□□□□□ -1.4
VTI1A-209ENST00000496445 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
VTI1A-209ENST00000496445 ACYP1P07311 99 aa6.27□□□□□ -1.41
VTI1A-209ENST00000496445 FAM240AA0A1B0GVK7 77 aa6.26□□□□□ -1.41
VTI1A-209ENST00000496445 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
VTI1A-209ENST00000496445 HIST1H4AP62805 103 aaKnown RBP6.24□□□□□ -1.41
VTI1A-209ENST00000496445 H0Y9P7 68 aa6.23□□□□□ -1.41
VTI1A-209ENST00000496445 UQCRQO14949 82 aa6.23□□□□□ -1.41
VTI1A-209ENST00000496445 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
VTI1A-209ENST00000496445 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
VTI1A-209ENST00000496445 ATOX1O00244 68 aa6.2□□□□□ -1.42
VTI1A-209ENST00000496445 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
VTI1A-209ENST00000496445 H0YAA0 97 aa6.19□□□□□ -1.42
VTI1A-209ENST00000496445 KMT2DO14686 5537 aa6.19□□□□□ -1.42
VTI1A-209ENST00000496445 NDUFC1O43677 76 aa6.17□□□□□ -1.42
VTI1A-209ENST00000496445 KRTAP5-9P26371 169 aa6.14□□□□□ -1.43
VTI1A-209ENST00000496445 A8MUN3 132 aa6.13□□□□□ -1.43
VTI1A-209ENST00000496445 LINC00643Q86TS7 51 aa6.12□□□□□ -1.43
VTI1A-209ENST00000496445 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
VTI1A-209ENST00000496445 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
VTI1A-209ENST00000496445 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
VTI1A-209ENST00000496445 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
VTI1A-209ENST00000496445 MP68P56378 58 aa6.04□□□□□ -1.44
VTI1A-209ENST00000496445 MT1XP80297 61 aa6.02□□□□□ -1.45
VTI1A-209ENST00000496445 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
VTI1A-209ENST00000496445 A0A1B0GV90 55 aa6□□□□□ -1.45
VTI1A-209ENST00000496445 P0C880 135 aa5.99□□□□□ -1.45
VTI1A-209ENST00000496445 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
VTI1A-209ENST00000496445 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
VTI1A-209ENST00000496445 H3BPC8 53 aa5.95□□□□□ -1.46
VTI1A-209ENST00000496445 R4GN34 69 aa5.94□□□□□ -1.46
VTI1A-209ENST00000496445 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
VTI1A-209ENST00000496445 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
VTI1A-209ENST00000496445 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
VTI1A-209ENST00000496445 M0QZ58 72 aa5.91□□□□□ -1.46
VTI1A-209ENST00000496445 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
VTI1A-209ENST00000496445 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
VTI1A-209ENST00000496445 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
VTI1A-209ENST00000496445 J3QR89 54 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 SPRR2EP22531 72 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 SPRR2BP35325 72 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 SPRR2AP35326 72 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
VTI1A-209ENST00000496445 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
VTI1A-209ENST00000496445 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
VTI1A-209ENST00000496445 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
VTI1A-209ENST00000496445 TRAV7A0A075B6U4 112 aa5.8□□□□□ -1.48
VTI1A-209ENST00000496445 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
VTI1A-209ENST00000496445 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
VTI1A-209ENST00000496445 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
VTI1A-209ENST00000496445 ACYP2P14621 99 aa5.74□□□□□ -1.49
VTI1A-209ENST00000496445 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
VTI1A-209ENST00000496445 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
VTI1A-209ENST00000496445 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
VTI1A-209ENST00000496445 SPRR2DP22532 72 aa5.66□□□□□ -1.5
VTI1A-209ENST00000496445 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
VTI1A-209ENST00000496445 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
VTI1A-209ENST00000496445 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
VTI1A-209ENST00000496445 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
VTI1A-209ENST00000496445 K7ERU9 68 aa5.6□□□□□ -1.51
VTI1A-209ENST00000496445 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
VTI1A-209ENST00000496445 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
VTI1A-209ENST00000496445 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
VTI1A-209ENST00000496445 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
VTI1A-209ENST00000496445 COA5Q86WW8 74 aa5.42□□□□□ -1.54
VTI1A-209ENST00000496445 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
VTI1A-209ENST00000496445 A0A0D9SG42 100 aa5.35□□□□□ -1.55
VTI1A-209ENST00000496445 MT1EP04732 61 aa5.35□□□□□ -1.55
VTI1A-209ENST00000496445 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
VTI1A-209ENST00000496445 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
VTI1A-209ENST00000496445 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
VTI1A-209ENST00000496445 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
VTI1A-209ENST00000496445 SEC61GP60059 68 aa5.29□□□□□ -1.56
VTI1A-209ENST00000496445 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
VTI1A-209ENST00000496445 COX7CP15954 63 aa5.27□□□□□ -1.57
VTI1A-209ENST00000496445 A0A1B0GU33 70 aa5.26□□□□□ -1.57
VTI1A-209ENST00000496445 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
VTI1A-209ENST00000496445 H7BZZ5 65 aa5.25□□□□□ -1.57
VTI1A-209ENST00000496445 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
VTI1A-209ENST00000496445 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
VTI1A-209ENST00000496445 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
VTI1A-209ENST00000496445 MT1GP13640 62 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms