RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
HERC4-211ENST00000492996 Q5W150 140 aa4.01□□□□□ -1.77
HERC4-211ENST00000492996 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
HERC4-211ENST00000492996 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
HERC4-211ENST00000492996 ACYP2P14621 99 aa3.99□□□□□ -1.77
HERC4-211ENST00000492996 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
HERC4-211ENST00000492996 LCE2BO14633 110 aa3.96□□□□□ -1.78
HERC4-211ENST00000492996 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
HERC4-211ENST00000492996 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
HERC4-211ENST00000492996 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
HERC4-211ENST00000492996 KRTAP13-3Q3SY46 172 aa3.93□□□□□ -1.78
HERC4-211ENST00000492996 LINC00304Q8N9R0 145 aa3.93□□□□□ -1.78
HERC4-211ENST00000492996 SPINK1P00995 79 aa3.92□□□□□ -1.78
HERC4-211ENST00000492996 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
HERC4-211ENST00000492996 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
HERC4-211ENST00000492996 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
HERC4-211ENST00000492996 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.78
HERC4-211ENST00000492996 TPRXLQ17RH7 258 aa3.9□□□□□ -1.79
HERC4-211ENST00000492996 P0C880 135 aa3.89□□□□□ -1.79
HERC4-211ENST00000492996 DMBT1Q9UGM3 2413 aaPredicted RBP3.88□□□□□ -1.79
HERC4-211ENST00000492996 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
HERC4-211ENST00000492996 A8MUU9 505 aa3.88□□□□□ -1.79
HERC4-211ENST00000492996 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
HERC4-211ENST00000492996 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
HERC4-211ENST00000492996 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
HERC4-211ENST00000492996 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
HERC4-211ENST00000492996 C20orf166-AS1Q96NR2 134 aa3.8□□□□□ -1.8
HERC4-211ENST00000492996 K7ERS5 55 aa3.8□□□□□ -1.8
HERC4-211ENST00000492996 XP32Q5T750 250 aa3.79□□□□□ -1.8
HERC4-211ENST00000492996 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
HERC4-211ENST00000492996 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
HERC4-211ENST00000492996 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
HERC4-211ENST00000492996 LRP2P98164 4655 aa3.75□□□□□ -1.81
HERC4-211ENST00000492996 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
HERC4-211ENST00000492996 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
HERC4-211ENST00000492996 H0YAA0 97 aa3.71□□□□□ -1.81
HERC4-211ENST00000492996 A0A1B0GU33 70 aa3.71□□□□□ -1.82
HERC4-211ENST00000492996 KRTAP3-1Q9BYR8 98 aa3.69□□□□□ -1.82
HERC4-211ENST00000492996 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
HERC4-211ENST00000492996 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
HERC4-211ENST00000492996 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
HERC4-211ENST00000492996 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
HERC4-211ENST00000492996 H1FX-AS1Q4G0G2 97 aa3.63□□□□□ -1.83
HERC4-211ENST00000492996 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
HERC4-211ENST00000492996 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
HERC4-211ENST00000492996 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
HERC4-211ENST00000492996 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
HERC4-211ENST00000492996 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
HERC4-211ENST00000492996 A0A0D9SG42 100 aa3.6□□□□□ -1.83
HERC4-211ENST00000492996 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
HERC4-211ENST00000492996 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
HERC4-211ENST00000492996 LPAP08519 4548 aa3.53□□□□□ -1.85
HERC4-211ENST00000492996 S4R3F8 94 aa3.52□□□□□ -1.85
HERC4-211ENST00000492996 MT1HP80294 61 aa3.51□□□□□ -1.85
HERC4-211ENST00000492996 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
HERC4-211ENST00000492996 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
HERC4-211ENST00000492996 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
HERC4-211ENST00000492996 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
HERC4-211ENST00000492996 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
HERC4-211ENST00000492996 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
HERC4-211ENST00000492996 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
HERC4-211ENST00000492996 MUC2Q02817 5179 aa3.35□□□□□ -1.87
HERC4-211ENST00000492996 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
HERC4-211ENST00000492996 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
HERC4-211ENST00000492996 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
HERC4-211ENST00000492996 M0QZ58 72 aa3.31□□□□□ -1.88
HERC4-211ENST00000492996 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
HERC4-211ENST00000492996 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
HERC4-211ENST00000492996 R4GN34 69 aa3.29□□□□□ -1.88
HERC4-211ENST00000492996 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
HERC4-211ENST00000492996 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
HERC4-211ENST00000492996 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
HERC4-211ENST00000492996 MT2AP02795 61 aa3.23□□□□□ -1.89
HERC4-211ENST00000492996 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
HERC4-211ENST00000492996 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
HERC4-211ENST00000492996 USH2AO75445 5202 aa3.17□□□□□ -1.9
HERC4-211ENST00000492996 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
HERC4-211ENST00000492996 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
HERC4-211ENST00000492996 M0R2T5 61 aa3.13□□□□□ -1.91
HERC4-211ENST00000492996 MT1FP04733 61 aa3.13□□□□□ -1.91
HERC4-211ENST00000492996 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
HERC4-211ENST00000492996 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
HERC4-211ENST00000492996 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
HERC4-211ENST00000492996 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
HERC4-211ENST00000492996 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
HERC4-211ENST00000492996 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
HERC4-211ENST00000492996 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
HERC4-211ENST00000492996 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
HERC4-211ENST00000492996 MT1BP07438 61 aa2.98□□□□□ -1.93
HERC4-211ENST00000492996 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
HERC4-211ENST00000492996 INE1O15225 51 aa2.97□□□□□ -1.93
HERC4-211ENST00000492996 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
HERC4-211ENST00000492996 TNP1P09430 55 aa2.96□□□□□ -1.94
HERC4-211ENST00000492996 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
HERC4-211ENST00000492996 NEBP20929 6669 aa2.89□□□□□ -1.95
HERC4-211ENST00000492996 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
HERC4-211ENST00000492996 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
HERC4-211ENST00000492996 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
HERC4-211ENST00000492996 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
HERC4-211ENST00000492996 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms