RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
SSX2IP-208ENST00000490476 Q86TA4 180 aa1.47□□□□□ -2.17
SSX2IP-208ENST00000490476 SERP2Q8N6R1 65 aa1.47□□□□□ -2.17
SSX2IP-208ENST00000490476 SPTSSBQ8NFR3 76 aa1.47□□□□□ -2.17
SSX2IP-208ENST00000490476 NXT2Q9NPJ8 142 aaKnown RBP1.47□□□□□ -2.17
SSX2IP-208ENST00000490476 KANTRA0A1W2PQU2 76 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 NAP1L6A6NFF2 107 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 NDUFC1O43677 76 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 BVES-AS1Q5T3Y7 98 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 TMEM14CQ9P0S9 112 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 C6orf48Q9UBA6 75 aa1.46□□□□□ -2.18
SSX2IP-208ENST00000490476 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 HCG22E2RYF7 251 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 NDUFA1O15239 70 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 CYP2G1PQ6ZSU1 146 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 C18orf32Q8TCD1 76 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 CYP4F30PQ9H0H9 118 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 LENEPQ9Y5L5 61 aa1.45□□□□□ -2.18
SSX2IP-208ENST00000490476 GNGT1P63211 74 aa1.44□□□□□ -2.18
SSX2IP-208ENST00000490476 MT1XP80297 61 aa1.44□□□□□ -2.18
SSX2IP-208ENST00000490476 SPATA45Q537H7 98 aa1.44□□□□□ -2.18
SSX2IP-208ENST00000490476 FXYD6Q9H0Q3 95 aa1.44□□□□□ -2.18
SSX2IP-208ENST00000490476 TRBV10-3A0A0K0K1G6 114 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 LINC00959A0A1B0GUT2 108 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 SYS1-DBNDD2H3BUS1 97 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 H3BUT2 72 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 SIX6O95475 246 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 ZNF56Q15929 161 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 MANBALQ9NQG1 85 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 HIGD1BQ9P298 99 aa1.43□□□□□ -2.18
SSX2IP-208ENST00000490476 ACYP1P07311 99 aa1.42□□□□□ -2.18
SSX2IP-208ENST00000490476 SMIM13P0DJ93 91 aa1.42□□□□□ -2.18
SSX2IP-208ENST00000490476 PMCHL1Q16048 86 aa1.42□□□□□ -2.18
SSX2IP-208ENST00000490476 IFI27L1Q96BM0 104 aa1.42□□□□□ -2.18
SSX2IP-208ENST00000490476 C7orf77A4D0Y5 90 aa1.41□□□□□ -2.18
SSX2IP-208ENST00000490476 H7BZZ5 65 aa1.41□□□□□ -2.18
SSX2IP-208ENST00000490476 LINC00643Q86TS7 51 aa1.41□□□□□ -2.18
SSX2IP-208ENST00000490476 PRO1854Q9UHT4 67 aa1.41□□□□□ -2.18
SSX2IP-208ENST00000490476 A0A087WXM4 84 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 TEX49A0A1B0GTD5 131 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 F2Z2F3 143 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 CHKB-CPT1BH3BT56 60 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 H3BVH4 76 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 CSAG1Q6PB30 78 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
SSX2IP-208ENST00000490476 TRAV23DV6A0A075B6W5 121 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 TRAV22A0A0B4J277 110 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 UMAD1C9J7I0 102 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 C10orf113Q5VZT2 155 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 SFTA2Q6UW10 78 aa1.39□□□□□ -2.19
SSX2IP-208ENST00000490476 TRBV30A0A0K0K1B3 111 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 NCR3O14931 201 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 COX6CP09669 75 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 KLKP1Q107X0 134 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
SSX2IP-208ENST00000490476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.37□□□□□ -2.19
SSX2IP-208ENST00000490476 H0YAA0 97 aa1.37□□□□□ -2.19
SSX2IP-208ENST00000490476 ZNF815PA8K554 130 aa1.36□□□□□ -2.19
SSX2IP-208ENST00000490476 ELOF1P60002 83 aaKnown RBP1.36□□□□□ -2.19
SSX2IP-208ENST00000490476 C20orf197Q8N268 126 aa1.36□□□□□ -2.19
SSX2IP-208ENST00000490476 CDC42SE2Q9NRR3 84 aa1.36□□□□□ -2.19
SSX2IP-208ENST00000490476 HIGD1CA8MV81 97 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 F8WEM9 126 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 JMJD7-PLA2G4BH0Y9G9 81 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 ARMS2P0C7Q2 107 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 IAPPP10997 89 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 PSENENQ9NZ42 101 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 V9GYH0 126 aa1.35□□□□□ -2.19
SSX2IP-208ENST00000490476 MYMXA0A1B0GTQ4 84 aa1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 PPP1R17O96001 155 aa1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 MT1GP13640 62 aa1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 ARL2-SNX15V9GYD0 113 aa1.34□□□□□ -2.19
SSX2IP-208ENST00000490476 LEPROTL1O95214 131 aa1.33□□□□□ -2.2
SSX2IP-208ENST00000490476 MT1EP04732 61 aa1.33□□□□□ -2.2
SSX2IP-208ENST00000490476 COX8AP10176 69 aa1.33□□□□□ -2.2
SSX2IP-208ENST00000490476 PDE6GP18545 87 aa1.33□□□□□ -2.2
SSX2IP-208ENST00000490476 NMES1Q9C002 83 aa1.33□□□□□ -2.2
SSX2IP-208ENST00000490476 D6R8Y8 96 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 MUSTN1Q8IVN3 82 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 MT1MQ8N339 61 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 COX7B2Q8TF08 81 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 PPP1R1CQ8WVI7 109 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 Q96NJ1 140 aa1.32□□□□□ -2.2
SSX2IP-208ENST00000490476 F8VRH5 84 aa1.31□□□□□ -2.2
SSX2IP-208ENST00000490476 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
SSX2IP-208ENST00000490476 GCHFRP30047 84 aa1.31□□□□□ -2.2
SSX2IP-208ENST00000490476 DEFB107AQ8IZN7 70 aa1.31□□□□□ -2.2
SSX2IP-208ENST00000490476 AMELXQ99217 191 aa1.31□□□□□ -2.2
SSX2IP-208ENST00000490476 M0QY20 66 aa1.3□□□□□ -2.2
SSX2IP-208ENST00000490476 IFI27P40305 119 aaPredicted RBP1.3□□□□□ -2.2
SSX2IP-208ENST00000490476 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
SSX2IP-208ENST00000490476 LINC01558Q9Y6Z2 57 aa1.3□□□□□ -2.2
SSX2IP-208ENST00000490476 V9GYV3 84 aa1.3□□□□□ -2.2
SSX2IP-208ENST00000490476 Q6JHZ5 121 aa1.29□□□□□ -2.2
SSX2IP-208ENST00000490476 BAGE3Q86Y29 109 aa1.29□□□□□ -2.2
SSX2IP-208ENST00000490476 BAGE2Q86Y30 109 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms