RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
HDAC6-233ENST00000489352 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
HDAC6-233ENST00000489352 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
HDAC6-233ENST00000489352 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
HDAC6-233ENST00000489352 ACYP1P07311 99 aa4.77□□□□□ -1.65
HDAC6-233ENST00000489352 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
HDAC6-233ENST00000489352 CCKP06307 115 aa4.76□□□□□ -1.65
HDAC6-233ENST00000489352 MT1XP80297 61 aa4.75□□□□□ -1.65
HDAC6-233ENST00000489352 Q6ZQT0 140 aa4.75□□□□□ -1.65
HDAC6-233ENST00000489352 MT4P47944 62 aa4.74□□□□□ -1.65
HDAC6-233ENST00000489352 A0A1B0GW54 56 aa4.73□□□□□ -1.65
HDAC6-233ENST00000489352 NDUFB1O75438 58 aa4.73□□□□□ -1.65
HDAC6-233ENST00000489352 S4R3F8 94 aa4.73□□□□□ -1.65
HDAC6-233ENST00000489352 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
HDAC6-233ENST00000489352 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
HDAC6-233ENST00000489352 KRTAP3-3Q9BYR6 98 aa4.71□□□□□ -1.66
HDAC6-233ENST00000489352 KRTAP3-2Q9BYR7 98 aa4.71□□□□□ -1.66
HDAC6-233ENST00000489352 J3KT08 172 aa4.69□□□□□ -1.66
HDAC6-233ENST00000489352 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
HDAC6-233ENST00000489352 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
HDAC6-233ENST00000489352 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
HDAC6-233ENST00000489352 UBL5Q9BZL1 73 aa4.69□□□□□ -1.66
HDAC6-233ENST00000489352 C7orf65Q6ZTY9 151 aa4.67□□□□□ -1.66
HDAC6-233ENST00000489352 LINC00643Q86TS7 51 aa4.67□□□□□ -1.66
HDAC6-233ENST00000489352 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
HDAC6-233ENST00000489352 NREPQ16612 68 aa4.65□□□□□ -1.67
HDAC6-233ENST00000489352 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
HDAC6-233ENST00000489352 Q6ZVQ6 151 aa4.65□□□□□ -1.67
HDAC6-233ENST00000489352 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
HDAC6-233ENST00000489352 NDUFS5O43920 106 aa4.62□□□□□ -1.67
HDAC6-233ENST00000489352 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
HDAC6-233ENST00000489352 CXCL6P80162 114 aa4.61□□□□□ -1.67
HDAC6-233ENST00000489352 BPY2O14599 106 aa4.6□□□□□ -1.67
HDAC6-233ENST00000489352 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
HDAC6-233ENST00000489352 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
HDAC6-233ENST00000489352 A8MUN3 132 aa4.57□□□□□ -1.68
HDAC6-233ENST00000489352 K7EQZ3 153 aa4.56□□□□□ -1.68
HDAC6-233ENST00000489352 SEC61GP60059 68 aa4.56□□□□□ -1.68
HDAC6-233ENST00000489352 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
HDAC6-233ENST00000489352 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
HDAC6-233ENST00000489352 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
HDAC6-233ENST00000489352 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
HDAC6-233ENST00000489352 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
HDAC6-233ENST00000489352 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
HDAC6-233ENST00000489352 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
HDAC6-233ENST00000489352 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
HDAC6-233ENST00000489352 A0A087WVE0 104 aa4.5□□□□□ -1.69
HDAC6-233ENST00000489352 Q8N9L7 120 aa4.5□□□□□ -1.69
HDAC6-233ENST00000489352 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
HDAC6-233ENST00000489352 HCG22E2RYF7 251 aa4.47□□□□□ -1.69
HDAC6-233ENST00000489352 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
HDAC6-233ENST00000489352 Q5W150 140 aa4.47□□□□□ -1.69
HDAC6-233ENST00000489352 V9GYY9 64 aa4.47□□□□□ -1.69
HDAC6-233ENST00000489352 hDV103S1A0JD37 113 aa4.46□□□□□ -1.7
HDAC6-233ENST00000489352 ATOX1O00244 68 aa4.46□□□□□ -1.7
HDAC6-233ENST00000489352 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
HDAC6-233ENST00000489352 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
HDAC6-233ENST00000489352 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
HDAC6-233ENST00000489352 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
HDAC6-233ENST00000489352 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
HDAC6-233ENST00000489352 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
HDAC6-233ENST00000489352 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
HDAC6-233ENST00000489352 SERP2Q8N6R1 65 aa4.39□□□□□ -1.71
HDAC6-233ENST00000489352 H0YAA0 97 aa4.38□□□□□ -1.71
HDAC6-233ENST00000489352 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
HDAC6-233ENST00000489352 UQCRQO14949 82 aa4.37□□□□□ -1.71
HDAC6-233ENST00000489352 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
HDAC6-233ENST00000489352 COX7CP15954 63 aa4.36□□□□□ -1.71
HDAC6-233ENST00000489352 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
HDAC6-233ENST00000489352 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
HDAC6-233ENST00000489352 R4GN34 69 aa4.35□□□□□ -1.71
HDAC6-233ENST00000489352 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
HDAC6-233ENST00000489352 MP68P56378 58 aa4.33□□□□□ -1.72
HDAC6-233ENST00000489352 TMEM258P61165 79 aa4.33□□□□□ -1.72
HDAC6-233ENST00000489352 H3BPC8 53 aa4.31□□□□□ -1.72
HDAC6-233ENST00000489352 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
HDAC6-233ENST00000489352 H0Y9P7 68 aa4.3□□□□□ -1.72
HDAC6-233ENST00000489352 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
HDAC6-233ENST00000489352 C20orf197Q8N268 126 aa4.29□□□□□ -1.72
HDAC6-233ENST00000489352 NDUFC1O43677 76 aa4.28□□□□□ -1.72
HDAC6-233ENST00000489352 LINC01554Q52M75 96 aa4.28□□□□□ -1.72
HDAC6-233ENST00000489352 MT1EP04732 61 aa4.27□□□□□ -1.73
HDAC6-233ENST00000489352 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
HDAC6-233ENST00000489352 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
HDAC6-233ENST00000489352 M0QZ58 72 aa4.25□□□□□ -1.73
HDAC6-233ENST00000489352 MT1GP13640 62 aa4.25□□□□□ -1.73
HDAC6-233ENST00000489352 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
HDAC6-233ENST00000489352 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
HDAC6-233ENST00000489352 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
HDAC6-233ENST00000489352 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
HDAC6-233ENST00000489352 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
HDAC6-233ENST00000489352 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
HDAC6-233ENST00000489352 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
HDAC6-233ENST00000489352 H7BZZ5 65 aa4.18□□□□□ -1.74
HDAC6-233ENST00000489352 SMIM26A0A096LP01 95 aa4.17□□□□□ -1.74
HDAC6-233ENST00000489352 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
HDAC6-233ENST00000489352 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
HDAC6-233ENST00000489352 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
HDAC6-233ENST00000489352 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-233ENST00000489352 MT1MQ8N339 61 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms