RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ATOX1O00244 68 aa10.27□□□□□ -0.77
CUL4A-209ENST00000488558 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
CUL4A-209ENST00000488558 A0A087WVE0 104 aa10.26□□□□□ -0.77
CUL4A-209ENST00000488558 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
CUL4A-209ENST00000488558 H0Y9P7 68 aa10.23□□□□□ -0.77
CUL4A-209ENST00000488558 KRTAP10-5P60370 271 aa10.19□□□□□ -0.78
CUL4A-209ENST00000488558 IMUPQ9GZP8 106 aa10.19□□□□□ -0.78
CUL4A-209ENST00000488558 H0YAA0 97 aa10.15□□□□□ -0.78
CUL4A-209ENST00000488558 NDUFC1O43677 76 aa10.15□□□□□ -0.78
CUL4A-209ENST00000488558 LINC00643Q86TS7 51 aa10.15□□□□□ -0.78
CUL4A-209ENST00000488558 A8MUN3 132 aa10.14□□□□□ -0.79
CUL4A-209ENST00000488558 LINC00208Q96KT6 92 aa10.04□□□□□ -0.8
CUL4A-209ENST00000488558 NEBP20929 6669 aa10.04□□□□□ -0.8
CUL4A-209ENST00000488558 OCR1Q9BZK8 76 aa10.02□□□□□ -0.81
CUL4A-209ENST00000488558 MP68P56378 58 aa10□□□□□ -0.81
CUL4A-209ENST00000488558 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
CUL4A-209ENST00000488558 MUC12Q9UKN1 5478 aa9.92□□□□□ -0.82
CUL4A-209ENST00000488558 KRTAP5-9P26371 169 aa9.91□□□□□ -0.82
CUL4A-209ENST00000488558 A0A1B0GV90 55 aa9.88□□□□□ -0.83
CUL4A-209ENST00000488558 H3BPC8 53 aa9.88□□□□□ -0.83
CUL4A-209ENST00000488558 J3QR89 54 aa9.81□□□□□ -0.84
CUL4A-209ENST00000488558 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
CUL4A-209ENST00000488558 PRO2289Q9P1D8 64 aa9.79□□□□□ -0.84
CUL4A-209ENST00000488558 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
CUL4A-209ENST00000488558 KMT2DO14686 5537 aa9.74□□□□□ -0.85
CUL4A-209ENST00000488558 R4GN34 69 aa9.74□□□□□ -0.85
CUL4A-209ENST00000488558 SCGB1A1P11684 91 aa9.72□□□□□ -0.85
CUL4A-209ENST00000488558 MT1XP80297 61 aa9.72□□□□□ -0.85
CUL4A-209ENST00000488558 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
CUL4A-209ENST00000488558 P0C880 135 aa9.71□□□□□ -0.86
CUL4A-209ENST00000488558 MDN1Q9NU22 5596 aa9.66□□□□□ -0.86
CUL4A-209ENST00000488558 KRTAP20-1Q3LI63 56 aa9.65□□□□□ -0.86
CUL4A-209ENST00000488558 M0QZ58 72 aa9.64□□□□□ -0.87
CUL4A-209ENST00000488558 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
CUL4A-209ENST00000488558 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
CUL4A-209ENST00000488558 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
CUL4A-209ENST00000488558 SPRR2FQ96RM1 72 aa9.53□□□□□ -0.88
CUL4A-209ENST00000488558 ACYP2P14621 99 aa9.5□□□□□ -0.89
CUL4A-209ENST00000488558 SMIM20Q8N5G0 67 aa9.49□□□□□ -0.89
CUL4A-209ENST00000488558 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
CUL4A-209ENST00000488558 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
CUL4A-209ENST00000488558 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
CUL4A-209ENST00000488558 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
CUL4A-209ENST00000488558 SPRR2EP22531 72 aa9.41□□□□□ -0.9
CUL4A-209ENST00000488558 SPRR2BP35325 72 aa9.41□□□□□ -0.9
CUL4A-209ENST00000488558 SPRR2AP35326 72 aa9.41□□□□□ -0.9
CUL4A-209ENST00000488558 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
CUL4A-209ENST00000488558 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
CUL4A-209ENST00000488558 K7ERU9 68 aa9.37□□□□□ -0.91
CUL4A-209ENST00000488558 CHKB-CPT1BH3BT56 60 aa9.31□□□□□ -0.92
CUL4A-209ENST00000488558 LCE1AQ5T7P2 110 aa9.3□□□□□ -0.92
CUL4A-209ENST00000488558 KRTAP4-8A0A0G2JLE6 195 aa9.28□□□□□ -0.92
CUL4A-209ENST00000488558 KRTAP4-8Q9BYQ9 185 aa9.28□□□□□ -0.92
CUL4A-209ENST00000488558 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
CUL4A-209ENST00000488558 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
CUL4A-209ENST00000488558 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
CUL4A-209ENST00000488558 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
CUL4A-209ENST00000488558 SPRR2DP22532 72 aa9.11□□□□□ -0.95
CUL4A-209ENST00000488558 SERP2Q8N6R1 65 aa9.09□□□□□ -0.95
CUL4A-209ENST00000488558 KRTAP2-2Q9BYT5 123 aa9.08□□□□□ -0.96
CUL4A-209ENST00000488558 KRTAP2-1Q9BYU5 128 aa9.08□□□□□ -0.96
CUL4A-209ENST00000488558 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
CUL4A-209ENST00000488558 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
CUL4A-209ENST00000488558 COA5Q86WW8 74 aa8.92□□□□□ -0.98
CUL4A-209ENST00000488558 LCE3BQ5TA77 95 aa8.87□□□□□ -0.99
CUL4A-209ENST00000488558 SEC61GP60059 68 aa8.82□□□□□ -1
CUL4A-209ENST00000488558 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
CUL4A-209ENST00000488558 COX7CP15954 63 aa8.77□□□□□ -1.01
CUL4A-209ENST00000488558 A0A0D9SG42 100 aa8.7□□□□□ -1.02
CUL4A-209ENST00000488558 KRTAP19-7Q3SYF9 63 aa8.7□□□□□ -1.02
CUL4A-209ENST00000488558 A0A1B0GU33 70 aa8.67□□□□□ -1.02
CUL4A-209ENST00000488558 H7BZZ5 65 aa8.67□□□□□ -1.02
CUL4A-209ENST00000488558 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
CUL4A-209ENST00000488558 MT1EP04732 61 aa8.63□□□□□ -1.03
CUL4A-209ENST00000488558 LCE5AQ5TCM9 118 aa8.63□□□□□ -1.03
CUL4A-209ENST00000488558 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
CUL4A-209ENST00000488558 SPINT4Q6UDR6 99 aa8.6□□□□□ -1.03
CUL4A-209ENST00000488558 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
CUL4A-209ENST00000488558 KRTAP19-3Q7Z4W3 81 aa8.58□□□□□ -1.04
CUL4A-209ENST00000488558 A0A1B0GU69 56 aa8.47□□□□□ -1.05
CUL4A-209ENST00000488558 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
CUL4A-209ENST00000488558 DSTQ03001 7570 aaKnown RBP8.43□□□□□ -1.06
CUL4A-209ENST00000488558 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
CUL4A-209ENST00000488558 MT1GP13640 62 aa8.37□□□□□ -1.07
CUL4A-209ENST00000488558 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
CUL4A-209ENST00000488558 A8MU10 97 aa8.33□□□□□ -1.08
CUL4A-209ENST00000488558 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CUL4A-209ENST00000488558 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
CUL4A-209ENST00000488558 KRTAP4-9Q9BYQ8 210 aa8.23□□□□□ -1.09
CUL4A-209ENST00000488558 TNP1P09430 55 aa8.22□□□□□ -1.09
CUL4A-209ENST00000488558 MT1MQ8N339 61 aa8.22□□□□□ -1.09
CUL4A-209ENST00000488558 MT1LQ93083 61 aa8.22□□□□□ -1.09
CUL4A-209ENST00000488558 PRR15LQ9BU68 103 aa8.21□□□□□ -1.1
CUL4A-209ENST00000488558 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
CUL4A-209ENST00000488558 CCDC179H3BU77 68 aa8.18□□□□□ -1.1
CUL4A-209ENST00000488558 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
CUL4A-209ENST00000488558 GPR98Q8WXG9 6306 aa8.16□□□□□ -1.1
CUL4A-209ENST00000488558 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
CUL4A-209ENST00000488558 LCE4AQ5TA78 99 aa8.08□□□□□ -1.12
CUL4A-209ENST00000488558 LCE1DQ5T752 114 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1037 ms