RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 H3BQ85 93 aa4.44□□□□□ -1.7
ATPAF1-205ENST00000487193 R4GN34 69 aa4.43□□□□□ -1.7
ATPAF1-205ENST00000487193 SVBPQ8N300 66 aa4.42□□□□□ -1.7
ATPAF1-205ENST00000487193 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-205ENST00000487193 M0R143 59 aa4.41□□□□□ -1.7
ATPAF1-205ENST00000487193 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
ATPAF1-205ENST00000487193 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ATPAF1-205ENST00000487193 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
ATPAF1-205ENST00000487193 C9JAW5 83 aa4.39□□□□□ -1.71
ATPAF1-205ENST00000487193 HCG22E2RYF7 251 aa4.39□□□□□ -1.71
ATPAF1-205ENST00000487193 SCGB1A1P11684 91 aa4.38□□□□□ -1.71
ATPAF1-205ENST00000487193 MT1MQ8N339 61 aa4.38□□□□□ -1.71
ATPAF1-205ENST00000487193 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
ATPAF1-205ENST00000487193 M0QZ58 72 aa4.36□□□□□ -1.71
ATPAF1-205ENST00000487193 TRIAP1O43715 76 aa4.36□□□□□ -1.71
ATPAF1-205ENST00000487193 S100A2P29034 98 aa4.36□□□□□ -1.71
ATPAF1-205ENST00000487193 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
ATPAF1-205ENST00000487193 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
ATPAF1-205ENST00000487193 NDUFC1O43677 76 aa4.33□□□□□ -1.72
ATPAF1-205ENST00000487193 CXCL6P80162 114 aa4.32□□□□□ -1.72
ATPAF1-205ENST00000487193 NREPQ16612 68 aa4.31□□□□□ -1.72
ATPAF1-205ENST00000487193 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
ATPAF1-205ENST00000487193 COL5A1-AS1Q5SY13 56 aa4.3□□□□□ -1.72
ATPAF1-205ENST00000487193 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BLQ99880 126 aa4.29□□□□□ -1.72
ATPAF1-205ENST00000487193 PRO1854Q9UHT4 67 aa4.29□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BKO60814 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BJP06899 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BOP23527 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BBP33778 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BDP58876 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 CEND1Q8N111 149 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
ATPAF1-205ENST00000487193 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
ATPAF1-205ENST00000487193 K7ERU9 68 aa4.26□□□□□ -1.73
ATPAF1-205ENST00000487193 P0C880 135 aa4.26□□□□□ -1.73
ATPAF1-205ENST00000487193 PSMB2P49721 201 aa4.25□□□□□ -1.73
ATPAF1-205ENST00000487193 SEC61GP60059 68 aa4.24□□□□□ -1.73
ATPAF1-205ENST00000487193 A0A1B0GW54 56 aa4.23□□□□□ -1.73
ATPAF1-205ENST00000487193 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
ATPAF1-205ENST00000487193 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
ATPAF1-205ENST00000487193 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
ATPAF1-205ENST00000487193 BAALC-AS2P0C853 105 aa4.18□□□□□ -1.74
ATPAF1-205ENST00000487193 BATFQ16520 125 aa4.18□□□□□ -1.74
ATPAF1-205ENST00000487193 Q8N9L7 120 aa4.18□□□□□ -1.74
ATPAF1-205ENST00000487193 MT1LQ93083 61 aa4.18□□□□□ -1.74
ATPAF1-205ENST00000487193 COX6CP09669 75 aa4.17□□□□□ -1.74
ATPAF1-205ENST00000487193 LOC110117498A0A087WWA1 95 aa4.16□□□□□ -1.74
ATPAF1-205ENST00000487193 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
ATPAF1-205ENST00000487193 K7EP34 96 aa4.15□□□□□ -1.75
ATPAF1-205ENST00000487193 TAX1BP3O14907 124 aa4.15□□□□□ -1.75
ATPAF1-205ENST00000487193 C20orf197Q8N268 126 aa4.15□□□□□ -1.75
ATPAF1-205ENST00000487193 BPY2O14599 106 aa4.14□□□□□ -1.75
ATPAF1-205ENST00000487193 COX8AP10176 69 aa4.14□□□□□ -1.75
ATPAF1-205ENST00000487193 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
ATPAF1-205ENST00000487193 UQCR10Q9UDW1 63 aa4.14□□□□□ -1.75
ATPAF1-205ENST00000487193 HSD52Q0P140 79 aa4.13□□□□□ -1.75
ATPAF1-205ENST00000487193 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
ATPAF1-205ENST00000487193 JMJD7-PLA2G4BH0Y9G9 81 aa4.1□□□□□ -1.75
ATPAF1-205ENST00000487193 FXYD2P54710 66 aa4.1□□□□□ -1.75
ATPAF1-205ENST00000487193 VAMP8Q9BV40 100 aa4.1□□□□□ -1.75
ATPAF1-205ENST00000487193 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
ATPAF1-205ENST00000487193 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
ATPAF1-205ENST00000487193 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
ATPAF1-205ENST00000487193 K7ERJ3 54 aa4.07□□□□□ -1.76
ATPAF1-205ENST00000487193 SPATA45Q537H7 98 aa4.07□□□□□ -1.76
ATPAF1-205ENST00000487193 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
ATPAF1-205ENST00000487193 SCGB1C2P0DMR2 95 aa4.06□□□□□ -1.76
ATPAF1-205ENST00000487193 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
ATPAF1-205ENST00000487193 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
ATPAF1-205ENST00000487193 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-205ENST00000487193 NAA38Q9BRA0 125 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-205ENST00000487193 V9GYY9 64 aa4.03□□□□□ -1.76
ATPAF1-205ENST00000487193 A0A0D9SG42 100 aa4.02□□□□□ -1.77
ATPAF1-205ENST00000487193 ACYP1P07311 99 aa4.01□□□□□ -1.77
ATPAF1-205ENST00000487193 J3QR89 54 aa4□□□□□ -1.77
ATPAF1-205ENST00000487193 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
ATPAF1-205ENST00000487193 ANAPC13Q9BS18 74 aa4□□□□□ -1.77
ATPAF1-205ENST00000487193 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
ATPAF1-205ENST00000487193 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
ATPAF1-205ENST00000487193 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
ATPAF1-205ENST00000487193 F8W1H4 67 aa3.96□□□□□ -1.78
ATPAF1-205ENST00000487193 PRO0461Q9UI25 63 aa3.96□□□□□ -1.78
ATPAF1-205ENST00000487193 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
ATPAF1-205ENST00000487193 SPCS1Q9Y6A9 102 aa3.95□□□□□ -1.78
ATPAF1-205ENST00000487193 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
ATPAF1-205ENST00000487193 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
ATPAF1-205ENST00000487193 TRAV22A0A0B4J277 110 aa3.91□□□□□ -1.78
ATPAF1-205ENST00000487193 ATXN8Q156A1 80 aa3.91□□□□□ -1.78
ATPAF1-205ENST00000487193 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
ATPAF1-205ENST00000487193 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
ATPAF1-205ENST00000487193 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
ATPAF1-205ENST00000487193 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
ATPAF1-205ENST00000487193 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms