RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 A0A087WVE0 104 aa9.27□□□□□ -0.93
LMBR1-217ENST00000485985 TRAV22A0A0B4J277 110 aa9.24□□□□□ -0.93
LMBR1-217ENST00000485985 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
LMBR1-217ENST00000485985 KRTAP5-9P26371 169 aa9.22□□□□□ -0.93
LMBR1-217ENST00000485985 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
LMBR1-217ENST00000485985 KMT2DO14686 5537 aa9.12□□□□□ -0.95
LMBR1-217ENST00000485985 ACYP1P07311 99 aa9.1□□□□□ -0.95
LMBR1-217ENST00000485985 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
LMBR1-217ENST00000485985 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
LMBR1-217ENST00000485985 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
LMBR1-217ENST00000485985 H0Y9P7 68 aa9.07□□□□□ -0.96
LMBR1-217ENST00000485985 HIST1H4AP62805 103 aaKnown RBP9.07□□□□□ -0.96
LMBR1-217ENST00000485985 UQCRQO14949 82 aa9.06□□□□□ -0.96
LMBR1-217ENST00000485985 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
LMBR1-217ENST00000485985 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
LMBR1-217ENST00000485985 J3QR89 54 aa9.03□□□□□ -0.96
LMBR1-217ENST00000485985 ATOX1O00244 68 aa9.02□□□□□ -0.97
LMBR1-217ENST00000485985 H0YAA0 97 aa9.01□□□□□ -0.97
LMBR1-217ENST00000485985 NDUFC1O43677 76 aa9.01□□□□□ -0.97
LMBR1-217ENST00000485985 KRTAP2-3P0C7H8 128 aa8.99□□□□□ -0.97
LMBR1-217ENST00000485985 KRTAP2-4Q9BYR9 128 aa8.99□□□□□ -0.97
LMBR1-217ENST00000485985 A8MUN3 132 aa8.92□□□□□ -0.98
LMBR1-217ENST00000485985 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
LMBR1-217ENST00000485985 LINC00208Q96KT6 92 aa8.9□□□□□ -0.98
LMBR1-217ENST00000485985 LINC00643Q86TS7 51 aa8.88□□□□□ -0.99
LMBR1-217ENST00000485985 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
LMBR1-217ENST00000485985 K7ERU9 68 aa8.84□□□□□ -0.99
LMBR1-217ENST00000485985 SPRR2FQ96RM1 72 aa8.83□□□□□ -1
LMBR1-217ENST00000485985 SPRR2EP22531 72 aa8.81□□□□□ -1
LMBR1-217ENST00000485985 SPRR2BP35325 72 aa8.81□□□□□ -1
LMBR1-217ENST00000485985 SPRR2AP35326 72 aa8.81□□□□□ -1
LMBR1-217ENST00000485985 MT1XP80297 61 aa8.8□□□□□ -1
LMBR1-217ENST00000485985 MP68P56378 58 aa8.79□□□□□ -1
LMBR1-217ENST00000485985 P0C880 135 aa8.73□□□□□ -1.01
LMBR1-217ENST00000485985 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
LMBR1-217ENST00000485985 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
LMBR1-217ENST00000485985 R4GN34 69 aa8.68□□□□□ -1.02
LMBR1-217ENST00000485985 KRTAP2-2Q9BYT5 123 aa8.67□□□□□ -1.02
LMBR1-217ENST00000485985 KRTAP2-1Q9BYU5 128 aa8.67□□□□□ -1.02
LMBR1-217ENST00000485985 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
LMBR1-217ENST00000485985 LCE1AQ5T7P2 110 aa8.65□□□□□ -1.02
LMBR1-217ENST00000485985 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
LMBR1-217ENST00000485985 H3BPC8 53 aa8.63□□□□□ -1.03
LMBR1-217ENST00000485985 M0QZ58 72 aa8.62□□□□□ -1.03
LMBR1-217ENST00000485985 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
LMBR1-217ENST00000485985 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
LMBR1-217ENST00000485985 MT-ATP8P03928 68 aa8.57□□□□□ -1.04
LMBR1-217ENST00000485985 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
LMBR1-217ENST00000485985 SPRR2DP22532 72 aa8.52□□□□□ -1.05
LMBR1-217ENST00000485985 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
LMBR1-217ENST00000485985 KRTAP4-8A0A0G2JLE6 195 aa8.47□□□□□ -1.05
LMBR1-217ENST00000485985 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
LMBR1-217ENST00000485985 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
LMBR1-217ENST00000485985 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
LMBR1-217ENST00000485985 KRTAP10-7P60409 375 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-217ENST00000485985 ACYP2P14621 99 aa8.35□□□□□ -1.07
LMBR1-217ENST00000485985 KRTAP10-12P60413 245 aa8.33□□□□□ -1.08
LMBR1-217ENST00000485985 LCE3BQ5TA77 95 aa8.33□□□□□ -1.08
LMBR1-217ENST00000485985 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
LMBR1-217ENST00000485985 SERP2Q8N6R1 65 aa8.21□□□□□ -1.1
LMBR1-217ENST00000485985 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
LMBR1-217ENST00000485985 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
LMBR1-217ENST00000485985 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
LMBR1-217ENST00000485985 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
LMBR1-217ENST00000485985 COX7CP15954 63 aa8.06□□□□□ -1.12
LMBR1-217ENST00000485985 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
LMBR1-217ENST00000485985 ANAPC13Q9BS18 74 aa8.05□□□□□ -1.12
LMBR1-217ENST00000485985 DSTQ03001 7570 aaKnown RBP8.02□□□□□ -1.13
LMBR1-217ENST00000485985 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
LMBR1-217ENST00000485985 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LMBR1-217ENST00000485985 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LMBR1-217ENST00000485985 KRTAP4-9Q9BYQ8 210 aa7.88□□□□□ -1.15
LMBR1-217ENST00000485985 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
LMBR1-217ENST00000485985 COA5Q86WW8 74 aa7.87□□□□□ -1.15
LMBR1-217ENST00000485985 LCE5AQ5TCM9 118 aa7.83□□□□□ -1.16
LMBR1-217ENST00000485985 H7BZZ5 65 aa7.81□□□□□ -1.16
LMBR1-217ENST00000485985 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
LMBR1-217ENST00000485985 MT1EP04732 61 aa7.8□□□□□ -1.16
LMBR1-217ENST00000485985 A0A0D9SG42 100 aa7.79□□□□□ -1.16
LMBR1-217ENST00000485985 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
LMBR1-217ENST00000485985 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
LMBR1-217ENST00000485985 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
LMBR1-217ENST00000485985 SEC61GP60059 68 aa7.71□□□□□ -1.18
LMBR1-217ENST00000485985 SERP1Q9Y6X1 66 aa7.71□□□□□ -1.18
LMBR1-217ENST00000485985 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
LMBR1-217ENST00000485985 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
LMBR1-217ENST00000485985 A0A1B0GU33 70 aa7.65□□□□□ -1.18
LMBR1-217ENST00000485985 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
LMBR1-217ENST00000485985 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
LMBR1-217ENST00000485985 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
LMBR1-217ENST00000485985 TMEM258P61165 79 aa7.59□□□□□ -1.19
LMBR1-217ENST00000485985 MT1GP13640 62 aa7.51□□□□□ -1.21
LMBR1-217ENST00000485985 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
LMBR1-217ENST00000485985 MT4P47944 62 aa7.5□□□□□ -1.21
LMBR1-217ENST00000485985 HMCN1Q96RW7 5635 aa7.45□□□□□ -1.22
LMBR1-217ENST00000485985 A8MU10 97 aa7.44□□□□□ -1.22
LMBR1-217ENST00000485985 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
LMBR1-217ENST00000485985 MT1MQ8N339 61 aa7.44□□□□□ -1.22
LMBR1-217ENST00000485985 A0A1B0GU69 56 aa7.43□□□□□ -1.22
LMBR1-217ENST00000485985 MT1LQ93083 61 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms