RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 H0YGX0 51 aa3.49□□□□□ -1.85
SORT1-206ENST00000485149 H7BZZ5 65 aa3.49□□□□□ -1.85
SORT1-206ENST00000485149 DEFB105AQ8NG35 78 aa3.49□□□□□ -1.85
SORT1-206ENST00000485149 SMIM11BQ8TCY0 68 aa3.49□□□□□ -1.85
SORT1-206ENST00000485149 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
SORT1-206ENST00000485149 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
SORT1-206ENST00000485149 LINC00304Q8N9R0 145 aa3.48□□□□□ -1.85
SORT1-206ENST00000485149 R4GN34 69 aa3.48□□□□□ -1.85
SORT1-206ENST00000485149 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
SORT1-206ENST00000485149 MOBPQ13875 183 aa3.47□□□□□ -1.85
SORT1-206ENST00000485149 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
SORT1-206ENST00000485149 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.85
SORT1-206ENST00000485149 F8WEM9 126 aa3.46□□□□□ -1.86
SORT1-206ENST00000485149 MT1HP80294 61 aa3.46□□□□□ -1.86
SORT1-206ENST00000485149 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
SORT1-206ENST00000485149 A0A0G2JQZ4 141 aa3.45□□□□□ -1.86
SORT1-206ENST00000485149 TEX49A0A1B0GTD5 131 aa3.45□□□□□ -1.86
SORT1-206ENST00000485149 KRTAP10-6P60371 365 aaPredicted RBP3.45□□□□□ -1.86
SORT1-206ENST00000485149 ATXN8Q156A1 80 aa3.45□□□□□ -1.86
SORT1-206ENST00000485149 A0A1W2PNM2 257 aa3.44□□□□□ -1.86
SORT1-206ENST00000485149 LINC00575Q6W349 94 aa3.44□□□□□ -1.86
SORT1-206ENST00000485149 TRAV22A0A0B4J277 110 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 ACYP1P07311 99 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 CSAG1Q6PB30 78 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 Q6ZQY7 126 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 SSBP3-AS1Q7Z2R9 100 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 ORMDL1Q9P0S3 153 aa3.43□□□□□ -1.86
SORT1-206ENST00000485149 USH2AO75445 5202 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 SPRR1BP22528 89 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 KLKP1Q107X0 134 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 Q5VV11 94 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SORT1-206ENST00000485149 A8MU10 97 aa3.41□□□□□ -1.86
SORT1-206ENST00000485149 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
SORT1-206ENST00000485149 MT3P25713 68 aa3.41□□□□□ -1.86
SORT1-206ENST00000485149 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
SORT1-206ENST00000485149 SPINK1P00995 79 aa3.4□□□□□ -1.87
SORT1-206ENST00000485149 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
SORT1-206ENST00000485149 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
SORT1-206ENST00000485149 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
SORT1-206ENST00000485149 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SORT1-206ENST00000485149 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
SORT1-206ENST00000485149 M0R2T5 61 aa3.38□□□□□ -1.87
SORT1-206ENST00000485149 Q6JHZ5 121 aa3.38□□□□□ -1.87
SORT1-206ENST00000485149 JMJD7-PLA2G4BH0Y9G9 81 aa3.37□□□□□ -1.87
SORT1-206ENST00000485149 HRES1P13985 223 aa3.37□□□□□ -1.87
SORT1-206ENST00000485149 DMAC1Q96GE9 116 aa3.36□□□□□ -1.87
SORT1-206ENST00000485149 C20orf197Q8N268 126 aa3.35□□□□□ -1.87
SORT1-206ENST00000485149 PDE6GP18545 87 aa3.34□□□□□ -1.87
SORT1-206ENST00000485149 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
SORT1-206ENST00000485149 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
SORT1-206ENST00000485149 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
SORT1-206ENST00000485149 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
SORT1-206ENST00000485149 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
SORT1-206ENST00000485149 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
SORT1-206ENST00000485149 DSCR10P59022 87 aa3.28□□□□□ -1.88
SORT1-206ENST00000485149 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
SORT1-206ENST00000485149 OBSCN-AS1Q96MR7 158 aa3.28□□□□□ -1.88
SORT1-206ENST00000485149 KMT2DO14686 5537 aa3.27□□□□□ -1.89
SORT1-206ENST00000485149 PCOTHQ58A44 107 aa3.27□□□□□ -1.89
SORT1-206ENST00000485149 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
SORT1-206ENST00000485149 ATP5EP2Q5VTU8 51 aa3.25□□□□□ -1.89
SORT1-206ENST00000485149 Q8N9L7 120 aa3.25□□□□□ -1.89
SORT1-206ENST00000485149 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
SORT1-206ENST00000485149 NDUFB1O75438 58 aa3.24□□□□□ -1.89
SORT1-206ENST00000485149 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
SORT1-206ENST00000485149 NREPQ16612 68 aa3.24□□□□□ -1.89
SORT1-206ENST00000485149 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
SORT1-206ENST00000485149 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
SORT1-206ENST00000485149 Q96NJ1 140 aa3.23□□□□□ -1.89
SORT1-206ENST00000485149 LINC00846Q9NV44 126 aa3.23□□□□□ -1.89
SORT1-206ENST00000485149 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SORT1-206ENST00000485149 IGKV4-1P06312 121 aa3.22□□□□□ -1.89
SORT1-206ENST00000485149 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
SORT1-206ENST00000485149 IGKV3D-7A0A0C4DH55 119 aa3.2□□□□□ -1.9
SORT1-206ENST00000485149 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
SORT1-206ENST00000485149 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SORT1-206ENST00000485149 LINC00472Q9H8W2 130 aa3.19□□□□□ -1.9
SORT1-206ENST00000485149 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
SORT1-206ENST00000485149 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
SORT1-206ENST00000485149 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
SORT1-206ENST00000485149 A0A087WVE0 104 aa3.13□□□□□ -1.91
SORT1-206ENST00000485149 MT2AP02795 61 aa3.13□□□□□ -1.91
SORT1-206ENST00000485149 K7EQZ3 153 aa3.12□□□□□ -1.91
SORT1-206ENST00000485149 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SORT1-206ENST00000485149 UQCR11O14957 56 aa3.1□□□□□ -1.91
SORT1-206ENST00000485149 MT1FP04733 61 aa3.1□□□□□ -1.91
SORT1-206ENST00000485149 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
SORT1-206ENST00000485149 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
SORT1-206ENST00000485149 MRPL34Q9BQ48 92 aaKnown RBP3.09□□□□□ -1.91
SORT1-206ENST00000485149 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
SORT1-206ENST00000485149 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
SORT1-206ENST00000485149 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
SORT1-206ENST00000485149 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
SORT1-206ENST00000485149 LINC00208Q96KT6 92 aa3.06□□□□□ -1.92
SORT1-206ENST00000485149 TP53AIP1Q9HCN2 124 aa3.06□□□□□ -1.92
SORT1-206ENST00000485149 INE1O15225 51 aa3.05□□□□□ -1.92
SORT1-206ENST00000485149 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms