RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 NDUFS5O43920 106 aa3.02□□□□□ -1.93
PTCD3-215ENST00000484203 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
PTCD3-215ENST00000484203 LINC00846Q9NV44 126 aa3.02□□□□□ -1.93
PTCD3-215ENST00000484203 K7EQZ3 153 aa3.01□□□□□ -1.93
PTCD3-215ENST00000484203 MT2AP02795 61 aa3.01□□□□□ -1.93
PTCD3-215ENST00000484203 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
PTCD3-215ENST00000484203 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
PTCD3-215ENST00000484203 UBL5Q9BZL1 73 aa3.01□□□□□ -1.93
PTCD3-215ENST00000484203 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
PTCD3-215ENST00000484203 CXCL6P80162 114 aa2.99□□□□□ -1.93
PTCD3-215ENST00000484203 H1FX-AS1Q4G0G2 97 aa2.99□□□□□ -1.93
PTCD3-215ENST00000484203 CASC2Q6XLA1 102 aa2.99□□□□□ -1.93
PTCD3-215ENST00000484203 ANAPC13Q9BS18 74 aa2.98□□□□□ -1.93
PTCD3-215ENST00000484203 MT1FP04733 61 aa2.97□□□□□ -1.93
PTCD3-215ENST00000484203 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
PTCD3-215ENST00000484203 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
PTCD3-215ENST00000484203 TP53AIP1Q9HCN2 124 aa2.96□□□□□ -1.94
PTCD3-215ENST00000484203 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-215ENST00000484203 HCG22E2RYF7 251 aa2.95□□□□□ -1.94
PTCD3-215ENST00000484203 CCDC179H3BU77 68 aa2.95□□□□□ -1.94
PTCD3-215ENST00000484203 FAM240AA0A1B0GVK7 77 aa2.94□□□□□ -1.94
PTCD3-215ENST00000484203 Q8N9L7 120 aa2.93□□□□□ -1.94
PTCD3-215ENST00000484203 Q5W150 140 aa2.92□□□□□ -1.94
PTCD3-215ENST00000484203 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PTCD3-215ENST00000484203 OCR1Q9BZK8 76 aa2.91□□□□□ -1.94
PTCD3-215ENST00000484203 C4orf26Q17RF5 130 aa2.9□□□□□ -1.95
PTCD3-215ENST00000484203 SMIM20Q8N5G0 67 aa2.9□□□□□ -1.95
PTCD3-215ENST00000484203 ACYP1P07311 99 aa2.89□□□□□ -1.95
PTCD3-215ENST00000484203 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
PTCD3-215ENST00000484203 IMUPQ9GZP8 106 aa2.89□□□□□ -1.95
PTCD3-215ENST00000484203 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
PTCD3-215ENST00000484203 ATP5EP2Q5VTU8 51 aa2.88□□□□□ -1.95
PTCD3-215ENST00000484203 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
PTCD3-215ENST00000484203 FAM236AA0A1B0GUQ0 79 aa2.87□□□□□ -1.95
PTCD3-215ENST00000484203 FAM236BA0A1B0GV22 79 aa2.87□□□□□ -1.95
PTCD3-215ENST00000484203 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
PTCD3-215ENST00000484203 LINC00643Q86TS7 51 aa2.87□□□□□ -1.95
PTCD3-215ENST00000484203 C1orf64Q8NEQ6 169 aa2.87□□□□□ -1.95
PTCD3-215ENST00000484203 S4R3F8 94 aa2.87□□□□□ -1.95
PTCD3-215ENST00000484203 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
PTCD3-215ENST00000484203 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
PTCD3-215ENST00000484203 UQCRQO14949 82 aa2.86□□□□□ -1.95
PTCD3-215ENST00000484203 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
PTCD3-215ENST00000484203 ATOX1O00244 68 aa2.85□□□□□ -1.95
PTCD3-215ENST00000484203 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
PTCD3-215ENST00000484203 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
PTCD3-215ENST00000484203 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
PTCD3-215ENST00000484203 COX7CP15954 63 aa2.84□□□□□ -1.95
PTCD3-215ENST00000484203 CYP4F30PQ9H0H9 118 aa2.84□□□□□ -1.95
PTCD3-215ENST00000484203 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
PTCD3-215ENST00000484203 LCA10Q71F78 164 aa2.82□□□□□ -1.96
PTCD3-215ENST00000484203 CRIPTQ9P021 101 aa2.82□□□□□ -1.96
PTCD3-215ENST00000484203 TMEM258P61165 79 aa2.81□□□□□ -1.96
PTCD3-215ENST00000484203 CYSTM1Q9H1C7 97 aa2.81□□□□□ -1.96
PTCD3-215ENST00000484203 A8MUN3 132 aa2.8□□□□□ -1.96
PTCD3-215ENST00000484203 Q5VV11 94 aa2.8□□□□□ -1.96
PTCD3-215ENST00000484203 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
PTCD3-215ENST00000484203 NDUFC1O43677 76 aa2.79□□□□□ -1.96
PTCD3-215ENST00000484203 KLKP1Q107X0 134 aa2.79□□□□□ -1.96
PTCD3-215ENST00000484203 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
PTCD3-215ENST00000484203 A0A087WVE0 104 aa2.78□□□□□ -1.96
PTCD3-215ENST00000484203 A8MU10 97 aa2.78□□□□□ -1.96
PTCD3-215ENST00000484203 A6NN06 94 aa2.77□□□□□ -1.97
PTCD3-215ENST00000484203 H0Y9P7 68 aa2.77□□□□□ -1.97
PTCD3-215ENST00000484203 H0YAA0 97 aa2.77□□□□□ -1.97
PTCD3-215ENST00000484203 MP68P56378 58 aa2.77□□□□□ -1.97
PTCD3-215ENST00000484203 KRTAP19-8Q3LI54 63 aa2.76□□□□□ -1.97
PTCD3-215ENST00000484203 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
PTCD3-215ENST00000484203 H3BPC8 53 aa2.74□□□□□ -1.97
PTCD3-215ENST00000484203 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
PTCD3-215ENST00000484203 C20orf197Q8N268 126 aa2.73□□□□□ -1.97
PTCD3-215ENST00000484203 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
PTCD3-215ENST00000484203 NEBP20929 6669 aa2.72□□□□□ -1.97
PTCD3-215ENST00000484203 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
PTCD3-215ENST00000484203 H7BZZ5 65 aa2.72□□□□□ -1.97
PTCD3-215ENST00000484203 MT1BP07438 61 aa2.72□□□□□ -1.97
PTCD3-215ENST00000484203 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
PTCD3-215ENST00000484203 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-215ENST00000484203 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
PTCD3-215ENST00000484203 PRO2289Q9P1D8 64 aa2.69□□□□□ -1.98
PTCD3-215ENST00000484203 SEC61GP60059 68 aa2.68□□□□□ -1.98
PTCD3-215ENST00000484203 ADM2Q7Z4H4 148 aa2.68□□□□□ -1.98
PTCD3-215ENST00000484203 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
PTCD3-215ENST00000484203 SMIM26A0A096LP01 95 aa2.67□□□□□ -1.98
PTCD3-215ENST00000484203 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 DMAC1Q96GE9 116 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 R4GN34 69 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
PTCD3-215ENST00000484203 SPTSSBQ8NFR3 76 aa2.65□□□□□ -1.99
PTCD3-215ENST00000484203 KMT2DO14686 5537 aa2.65□□□□□ -1.99
PTCD3-215ENST00000484203 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
PTCD3-215ENST00000484203 ACYP2P14621 99 aa2.63□□□□□ -1.99
PTCD3-215ENST00000484203 M0QZ58 72 aa2.61□□□□□ -1.99
PTCD3-215ENST00000484203 BRK1Q8WUW1 75 aa2.59□□□□□ -1.99
PTCD3-215ENST00000484203 CHKB-CPT1BH3BT56 60 aa2.58□□□□□ -2
PTCD3-215ENST00000484203 P0C880 135 aa2.58□□□□□ -2
PTCD3-215ENST00000484203 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
PTCD3-215ENST00000484203 V9GYY9 64 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms