RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
SMARCC1-205ENST00000483847 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
SMARCC1-205ENST00000483847 Q5W150 140 aa4.7□□□□□ -1.66
SMARCC1-205ENST00000483847 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
SMARCC1-205ENST00000483847 PRR15Q8IV56 129 aa4.7□□□□□ -1.66
SMARCC1-205ENST00000483847 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
SMARCC1-205ENST00000483847 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
SMARCC1-205ENST00000483847 FAM240AA0A1B0GVK7 77 aa4.69□□□□□ -1.66
SMARCC1-205ENST00000483847 NDUFS5O43920 106 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 ACYP1P07311 99 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 SPRR2DP22532 72 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
SMARCC1-205ENST00000483847 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
SMARCC1-205ENST00000483847 CSAG1Q6PB30 78 aa4.66□□□□□ -1.66
SMARCC1-205ENST00000483847 S4R3F8 94 aa4.66□□□□□ -1.66
SMARCC1-205ENST00000483847 BAALC-AS2P0C853 105 aa4.65□□□□□ -1.67
SMARCC1-205ENST00000483847 LCA10Q71F78 164 aa4.65□□□□□ -1.67
SMARCC1-205ENST00000483847 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
SMARCC1-205ENST00000483847 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
SMARCC1-205ENST00000483847 K7EQZ3 153 aa4.61□□□□□ -1.67
SMARCC1-205ENST00000483847 ANAPC13Q9BS18 74 aa4.61□□□□□ -1.67
SMARCC1-205ENST00000483847 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SMARCC1-205ENST00000483847 LINC00643Q86TS7 51 aa4.59□□□□□ -1.67
SMARCC1-205ENST00000483847 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
SMARCC1-205ENST00000483847 A0A1B0GW54 56 aa4.58□□□□□ -1.68
SMARCC1-205ENST00000483847 MT1XP80297 61 aa4.58□□□□□ -1.68
SMARCC1-205ENST00000483847 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
SMARCC1-205ENST00000483847 NREPQ16612 68 aa4.57□□□□□ -1.68
SMARCC1-205ENST00000483847 C1orf64Q8NEQ6 169 aa4.56□□□□□ -1.68
SMARCC1-205ENST00000483847 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
SMARCC1-205ENST00000483847 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
SMARCC1-205ENST00000483847 C14orf132Q9NPU4 83 aa4.54□□□□□ -1.68
SMARCC1-205ENST00000483847 HCG22E2RYF7 251 aa4.53□□□□□ -1.68
SMARCC1-205ENST00000483847 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
SMARCC1-205ENST00000483847 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-205ENST00000483847 PDE6GP18545 87 aa4.51□□□□□ -1.69
SMARCC1-205ENST00000483847 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
SMARCC1-205ENST00000483847 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
SMARCC1-205ENST00000483847 CASC2Q6XLA1 102 aa4.5□□□□□ -1.69
SMARCC1-205ENST00000483847 ATOX1O00244 68 aa4.49□□□□□ -1.69
SMARCC1-205ENST00000483847 Q8N9L7 120 aa4.49□□□□□ -1.69
SMARCC1-205ENST00000483847 CXCL6P80162 114 aa4.48□□□□□ -1.69
SMARCC1-205ENST00000483847 UBL5Q9BZL1 73 aa4.48□□□□□ -1.69
SMARCC1-205ENST00000483847 A0A087WVE0 104 aa4.47□□□□□ -1.69
SMARCC1-205ENST00000483847 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SMARCC1-205ENST00000483847 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
SMARCC1-205ENST00000483847 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
SMARCC1-205ENST00000483847 BPY2O14599 106 aa4.45□□□□□ -1.7
SMARCC1-205ENST00000483847 UQCRQO14949 82 aa4.45□□□□□ -1.7
SMARCC1-205ENST00000483847 COX7CP15954 63 aa4.43□□□□□ -1.7
SMARCC1-205ENST00000483847 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
SMARCC1-205ENST00000483847 A8MUN3 132 aa4.41□□□□□ -1.7
SMARCC1-205ENST00000483847 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
SMARCC1-205ENST00000483847 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
SMARCC1-205ENST00000483847 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
SMARCC1-205ENST00000483847 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
SMARCC1-205ENST00000483847 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
SMARCC1-205ENST00000483847 H0YAA0 97 aa4.36□□□□□ -1.71
SMARCC1-205ENST00000483847 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
SMARCC1-205ENST00000483847 TMEM258P61165 79 aa4.34□□□□□ -1.71
SMARCC1-205ENST00000483847 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.71
SMARCC1-205ENST00000483847 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
SMARCC1-205ENST00000483847 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
SMARCC1-205ENST00000483847 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-205ENST00000483847 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
SMARCC1-205ENST00000483847 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
SMARCC1-205ENST00000483847 NDUFC1O43677 76 aa4.29□□□□□ -1.72
SMARCC1-205ENST00000483847 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
SMARCC1-205ENST00000483847 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
SMARCC1-205ENST00000483847 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
SMARCC1-205ENST00000483847 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-205ENST00000483847 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
SMARCC1-205ENST00000483847 R4GN34 69 aa4.24□□□□□ -1.73
SMARCC1-205ENST00000483847 H7BZZ5 65 aa4.22□□□□□ -1.73
SMARCC1-205ENST00000483847 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
SMARCC1-205ENST00000483847 M0QZ58 72 aa4.21□□□□□ -1.74
SMARCC1-205ENST00000483847 P0C880 135 aa4.21□□□□□ -1.74
SMARCC1-205ENST00000483847 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
SMARCC1-205ENST00000483847 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
SMARCC1-205ENST00000483847 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
SMARCC1-205ENST00000483847 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
SMARCC1-205ENST00000483847 LOC101927531A0A1B0GV80 90 aa4.16□□□□□ -1.74
SMARCC1-205ENST00000483847 MT4P47944 62 aa4.15□□□□□ -1.75
SMARCC1-205ENST00000483847 MP68P56378 58 aa4.15□□□□□ -1.75
SMARCC1-205ENST00000483847 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
SMARCC1-205ENST00000483847 TRAV22A0A0B4J277 110 aa4.14□□□□□ -1.75
SMARCC1-205ENST00000483847 SEC61GP60059 68 aa4.14□□□□□ -1.75
SMARCC1-205ENST00000483847 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
SMARCC1-205ENST00000483847 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SMARCC1-205ENST00000483847 H3BPC8 53 aa4.13□□□□□ -1.75
SMARCC1-205ENST00000483847 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
SMARCC1-205ENST00000483847 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
SMARCC1-205ENST00000483847 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
SMARCC1-205ENST00000483847 H0Y9P7 68 aa4.07□□□□□ -1.76
SMARCC1-205ENST00000483847 MT1EP04732 61 aa4.07□□□□□ -1.76
SMARCC1-205ENST00000483847 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
SMARCC1-205ENST00000483847 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
SMARCC1-205ENST00000483847 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms