RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SPTY2D1-AS1A0A0U1RR47 76 aa1.04□□□□□ -2.24
COPA-203ENST00000481040 PRH1P02810 166 aa1.04□□□□□ -2.24
COPA-203ENST00000481040 HRNRQ86YZ3 2850 aaPredicted RBP1.04□□□□□ -2.24
COPA-203ENST00000481040 USF3Q68DE3 2245 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 CPSF4LA6NMK7 179 aaKnown RBP1.03□□□□□ -2.24
COPA-203ENST00000481040 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 USMG5Q96IX5 58 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 KRTAP2-1Q9BYU5 128 aa1.03□□□□□ -2.24
COPA-203ENST00000481040 COX6B1P14854 86 aa1.02□□□□□ -2.25
COPA-203ENST00000481040 ATXN8Q156A1 80 aa1.02□□□□□ -2.25
COPA-203ENST00000481040 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
COPA-203ENST00000481040 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
COPA-203ENST00000481040 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
COPA-203ENST00000481040 GNG13Q9P2W3 67 aa1.01□□□□□ -2.25
COPA-203ENST00000481040 TNCP24821 2201 aa1.01□□□□□ -2.25
COPA-203ENST00000481040 I3L3M4 83 aa1□□□□□ -2.25
COPA-203ENST00000481040 RPL38P63173 70 aaKnown RBP1□□□□□ -2.25
COPA-203ENST00000481040 TNXBP22105 4242 aa1□□□□□ -2.25
COPA-203ENST00000481040 VPS13BQ7Z7G8 4022 aa0.99□□□□□ -2.25
COPA-203ENST00000481040 NDUFA4O00483 81 aa0.99□□□□□ -2.25
COPA-203ENST00000481040 SFTA3P0C7M3 94 aa0.98□□□□□ -2.25
COPA-203ENST00000481040 MRPL34Q9BQ48 92 aaKnown RBP0.98□□□□□ -2.25
COPA-203ENST00000481040 MDN1Q9NU22 5596 aa0.97□□□□□ -2.25
COPA-203ENST00000481040 ENHOQ6UWT2 76 aa0.97□□□□□ -2.25
COPA-203ENST00000481040 SPRR1AP35321 89 aa0.96□□□□□ -2.26
COPA-203ENST00000481040 Q5VSD8 79 aa0.96□□□□□ -2.26
COPA-203ENST00000481040 LPAP08519 4548 aa0.96□□□□□ -2.26
COPA-203ENST00000481040 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
COPA-203ENST00000481040 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
COPA-203ENST00000481040 SPRR1BP22528 89 aa0.94□□□□□ -2.26
COPA-203ENST00000481040 LINC01549A6NIU2 74 aa0.93□□□□□ -2.26
COPA-203ENST00000481040 CCL22O00626 93 aa0.92□□□□□ -2.26
COPA-203ENST00000481040 DNAH8Q96JB1 4490 aa0.91□□□□□ -2.26
COPA-203ENST00000481040 UBL5Q9BZL1 73 aa0.91□□□□□ -2.26
COPA-203ENST00000481040 KCNQ1DNQ9H478 68 aa0.9□□□□□ -2.27
COPA-203ENST00000481040 APLNQ9ULZ1 77 aa0.9□□□□□ -2.27
COPA-203ENST00000481040 COX6B2Q6YFQ2 88 aa0.89□□□□□ -2.27
COPA-203ENST00000481040 DEFB105AQ8NG35 78 aa0.89□□□□□ -2.27
COPA-203ENST00000481040 MUC17Q685J3 4493 aa0.89□□□□□ -2.27
COPA-203ENST00000481040 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
COPA-203ENST00000481040 NDUFA3O95167 84 aa0.88□□□□□ -2.27
COPA-203ENST00000481040 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
COPA-203ENST00000481040 Q9Y3F1 56 aa0.88□□□□□ -2.27
COPA-203ENST00000481040 SPINK1P00995 79 aa0.87□□□□□ -2.27
COPA-203ENST00000481040 DEFB131BA0A096LNP1 70 aa0.86□□□□□ -2.27
COPA-203ENST00000481040 KLK9Q2XQG4 91 aa0.86□□□□□ -2.27
COPA-203ENST00000481040 CDKN2A-AS1Q9UH64 79 aa0.86□□□□□ -2.27
COPA-203ENST00000481040 ETDCA0A1B0GVM5 59 aa0.84□□□□□ -2.27
COPA-203ENST00000481040 CRIP1P50238 77 aa0.84□□□□□ -2.27
COPA-203ENST00000481040 TFF3Q07654 80 aa0.84□□□□□ -2.27
COPA-203ENST00000481040 DEFB109BQ30KR1 87 aa0.84□□□□□ -2.27
COPA-203ENST00000481040 MRPL33O75394 65 aaKnown RBP0.83□□□□□ -2.28
COPA-203ENST00000481040 DEFB114Q30KQ6 69 aa0.83□□□□□ -2.28
COPA-203ENST00000481040 FXYD6Q9H0Q3 95 aa0.83□□□□□ -2.28
COPA-203ENST00000481040 WFDC13Q8IUB5 93 aa0.82□□□□□ -2.28
COPA-203ENST00000481040 SPINK4O60575 86 aa0.81□□□□□ -2.28
COPA-203ENST00000481040 U3KQA8 63 aa0.8□□□□□ -2.28
COPA-203ENST00000481040 H0YAA0 97 aa0.79□□□□□ -2.28
COPA-203ENST00000481040 FCER1GP30273 86 aa0.79□□□□□ -2.28
COPA-203ENST00000481040 LINC00158P58513 81 aa0.79□□□□□ -2.28
COPA-203ENST00000481040 K7EMI3 77 aa0.78□□□□□ -2.28
COPA-203ENST00000481040 CD52P31358 61 aa0.78□□□□□ -2.28
COPA-203ENST00000481040 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
COPA-203ENST00000481040 KRTAP19-6Q3LI70 58 aa0.76□□□□□ -2.29
COPA-203ENST00000481040 M0R1W7 72 aa0.75□□□□□ -2.29
COPA-203ENST00000481040 STATHP02808 62 aa0.75□□□□□ -2.29
COPA-203ENST00000481040 NMES1Q9C002 83 aa0.75□□□□□ -2.29
COPA-203ENST00000481040 LYNX1G3V0Z9 82 aa0.74□□□□□ -2.29
COPA-203ENST00000481040 MT1HL1P0DM35 61 aa0.73□□□□□ -2.29
COPA-203ENST00000481040 NCBP2-AS2Q69YL0 99 aa0.73□□□□□ -2.29
COPA-203ENST00000481040 IGIPA6NJ69 53 aa0.72□□□□□ -2.29
COPA-203ENST00000481040 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
COPA-203ENST00000481040 SERF2P84101 59 aa0.71□□□□□ -2.3
COPA-203ENST00000481040 SPRR2EP22531 72 aa0.7□□□□□ -2.3
COPA-203ENST00000481040 SPRR2BP35325 72 aa0.7□□□□□ -2.3
COPA-203ENST00000481040 SPRR2AP35326 72 aa0.7□□□□□ -2.3
COPA-203ENST00000481040 SMR3BP02814 79 aaPredicted RBP0.69□□□□□ -2.3
COPA-203ENST00000481040 DEFB130BP0DP73 79 aa0.69□□□□□ -2.3
COPA-203ENST00000481040 DEFB130AP0DP74 79 aa0.69□□□□□ -2.3
COPA-203ENST00000481040 SPRR2DP22532 72 aa0.69□□□□□ -2.3
COPA-203ENST00000481040 DEFB104AQ8WTQ1 72 aa0.69□□□□□ -2.3
COPA-203ENST00000481040 IAPPP10997 89 aa0.68□□□□□ -2.3
COPA-203ENST00000481040 MT1HP80294 61 aa0.67□□□□□ -2.3
COPA-203ENST00000481040 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.3
COPA-203ENST00000481040 SNRPGP15A8MWD9 76 aa0.65□□□□□ -2.31
COPA-203ENST00000481040 DEFB108AA8MXU0 73 aa0.65□□□□□ -2.31
COPA-203ENST00000481040 MINOS1Q5TGZ0 78 aa0.65□□□□□ -2.31
COPA-203ENST00000481040 MT4P47944 62 aa0.64□□□□□ -2.31
COPA-203ENST00000481040 DEFB133Q30KQ1 61 aa0.64□□□□□ -2.31
COPA-203ENST00000481040 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
COPA-203ENST00000481040 RPS27P42677 84 aaKnown RBP0.61□□□□□ -2.31
COPA-203ENST00000481040 RPS27LQ71UM5 84 aaKnown RBP0.61□□□□□ -2.31
COPA-203ENST00000481040 C6orf48Q9UBA6 75 aa0.61□□□□□ -2.31
COPA-203ENST00000481040 H0YGX0 51 aa0.6□□□□□ -2.31
COPA-203ENST00000481040 PLNP26678 52 aa0.6□□□□□ -2.31
COPA-203ENST00000481040 CMC2Q9NRP2 79 aa0.6□□□□□ -2.31
COPA-203ENST00000481040 PRM1P04553 51 aa0.59□□□□□ -2.31
COPA-203ENST00000481040 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms