RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FAM236B	A0A1B0GV22	79 aa		7.71	□□□□□ -1.18
HDLBP-238	ENST00000479894	MPLKIP	Q8TAP9	179 aa		7.71	□□□□□ -1.18
HDLBP-238	ENST00000479894	KRTAP20-1	Q3LI63	56 aa		7.68	□□□□□ -1.18
HDLBP-238	ENST00000479894	TRAV7	A0A075B6U4	112 aa		7.67	□□□□□ -1.18
HDLBP-238	ENST00000479894	C1orf64	Q8NEQ6	169 aa		7.67	□□□□□ -1.18
HDLBP-238	ENST00000479894	CYP4F30P	Q9H0H9	118 aa		7.67	□□□□□ -1.18
HDLBP-238	ENST00000479894	LINC00208	Q96KT6	92 aa		7.64	□□□□□ -1.19
HDLBP-238	ENST00000479894	MUC12	Q9UKN1	5478 aa		7.6	□□□□□ -1.19
HDLBP-238	ENST00000479894	C4orf26	Q17RF5	130 aa		7.59	□□□□□ -1.19
HDLBP-238	ENST00000479894	H1FX-AS1	Q4G0G2	97 aa		7.58	□□□□□ -1.2
HDLBP-238	ENST00000479894	SERP2	Q8N6R1	65 aa		7.57	□□□□□ -1.2
HDLBP-238	ENST00000479894		A8MUN3	132 aa		7.5	□□□□□ -1.21
HDLBP-238	ENST00000479894	KLKP1	Q107X0	134 aa		7.46	□□□□□ -1.22
HDLBP-238	ENST00000479894	COX7C	P15954	63 aa		7.43	□□□□□ -1.22
HDLBP-238	ENST00000479894	C20orf197	Q8N268	126 aa		7.43	□□□□□ -1.22
HDLBP-238	ENST00000479894	ANAPC13	Q9BS18	74 aa		7.41	□□□□□ -1.22
HDLBP-238	ENST00000479894	KRTAP3-1	Q9BYR8	98 aa		7.41	□□□□□ -1.22
HDLBP-238	ENST00000479894		S4R3F8	94 aa		7.41	□□□□□ -1.22
HDLBP-238	ENST00000479894	SNURF	Q9Y675	71 aa		7.38	□□□□□ -1.23
HDLBP-238	ENST00000479894	NDUFC1	O43677	76 aa		7.37	□□□□□ -1.23
HDLBP-238	ENST00000479894	CSAG1	Q6PB30	78 aa		7.36	□□□□□ -1.23
HDLBP-238	ENST00000479894	SPANXA2-OT1	Q8N9U9	137 aa		7.34	□□□□□ -1.23
HDLBP-238	ENST00000479894	DMAC1	Q96GE9	116 aa		7.34	□□□□□ -1.23
HDLBP-238	ENST00000479894	KRTAP5-9	P26371	169 aa		7.33	□□□□□ -1.24
HDLBP-238	ENST00000479894	KRTAP2-3	P0C7H8	128 aa		7.32	□□□□□ -1.24
HDLBP-238	ENST00000479894	ACYP2	P14621	99 aa		7.32	□□□□□ -1.24
HDLBP-238	ENST00000479894	KRTAP2-4	Q9BYR9	128 aa		7.32	□□□□□ -1.24
HDLBP-238	ENST00000479894	LCA10	Q71F78	164 aa		7.3	□□□□□ -1.24
HDLBP-238	ENST00000479894	MDN1	Q9NU22	5596 aa		7.29	□□□□□ -1.24
HDLBP-238	ENST00000479894		A6NN06	94 aa		7.26	□□□□□ -1.25
HDLBP-238	ENST00000479894	KMT2D	O14686	5537 aa		7.26	□□□□□ -1.25
HDLBP-238	ENST00000479894	SPTSSB	Q8NFR3	76 aa		7.24	□□□□□ -1.25
HDLBP-238	ENST00000479894	CHKB-CPT1B	H3BT56	60 aa		7.2	□□□□□ -1.26
HDLBP-238	ENST00000479894		H7BZZ5	65 aa		7.18	□□□□□ -1.26
HDLBP-238	ENST00000479894	KRTAP3-3	Q9BYR6	98 aa		7.18	□□□□□ -1.26
HDLBP-238	ENST00000479894	CCDC179	H3BU77	68 aa		7.14	□□□□□ -1.27
HDLBP-238	ENST00000479894		H0YAA0	97 aa		7.12	□□□□□ -1.27
HDLBP-238	ENST00000479894	ATP5E	P56381	51 aa	Predicted RBP	7.11	□□□□□ -1.27
HDLBP-238	ENST00000479894	CYSTM1	Q9H1C7	97 aa		7.07	□□□□□ -1.28
HDLBP-238	ENST00000479894	MT1B	P07438	61 aa		7.05	□□□□□ -1.28
HDLBP-238	ENST00000479894	KRTAP10-5	P60370	271 aa		7.05	□□□□□ -1.28
HDLBP-238	ENST00000479894	KRTAP2-2	Q9BYT5	123 aa		7.05	□□□□□ -1.28
HDLBP-238	ENST00000479894	KRTAP2-1	Q9BYU5	128 aa		7.05	□□□□□ -1.28
HDLBP-238	ENST00000479894	COA5	Q86WW8	74 aa		7.04	□□□□□ -1.28
HDLBP-238	ENST00000479894	CRIPT	Q9P021	101 aa		7.04	□□□□□ -1.28
HDLBP-238	ENST00000479894	TMEM258	P61165	79 aa		7.03	□□□□□ -1.28
HDLBP-238	ENST00000479894		Q5VV11	94 aa		7.01	□□□□□ -1.29
HDLBP-238	ENST00000479894	ADM2	Q7Z4H4	148 aa		6.99	□□□□□ -1.29
HDLBP-238	ENST00000479894	SPRR2E	P22531	72 aa		6.96	□□□□□ -1.3
HDLBP-238	ENST00000479894	SPRR2B	P35325	72 aa		6.96	□□□□□ -1.3
HDLBP-238	ENST00000479894	SPRR2A	P35326	72 aa		6.96	□□□□□ -1.3
HDLBP-238	ENST00000479894	KRTAP19-8	Q3LI54	63 aa		6.96	□□□□□ -1.3
HDLBP-238	ENST00000479894	SEC61G	P60059	68 aa		6.92	□□□□□ -1.3
HDLBP-238	ENST00000479894	SPRR2F	Q96RM1	72 aa		6.89	□□□□□ -1.31
HDLBP-238	ENST00000479894	SPRR2G	Q9BYE4	73 aa		6.89	□□□□□ -1.31
HDLBP-238	ENST00000479894	PCP4	P48539	62 aa		6.88	□□□□□ -1.31
HDLBP-238	ENST00000479894	SERP1	Q9Y6X1	66 aa		6.87	□□□□□ -1.31
HDLBP-238	ENST00000479894		R4GN34	69 aa		6.85	□□□□□ -1.31
HDLBP-238	ENST00000479894		P0C880	135 aa		6.82	□□□□□ -1.32
HDLBP-238	ENST00000479894	KRTAP3-2	Q9BYR7	98 aa		6.82	□□□□□ -1.32
HDLBP-238	ENST00000479894		M0QZ58	72 aa		6.78	□□□□□ -1.32
HDLBP-238	ENST00000479894	LCE1A	Q5T7P2	110 aa		6.78	□□□□□ -1.32
HDLBP-238	ENST00000479894	PRR15L	Q9BU68	103 aa		6.75	□□□□□ -1.33
HDLBP-238	ENST00000479894	GPR98	Q8WXG9	6306 aa		6.75	□□□□□ -1.33
HDLBP-238	ENST00000479894		A0A1B0GU69	56 aa		6.74	□□□□□ -1.33
HDLBP-238	ENST00000479894	SPRR2D	P22532	72 aa		6.73	□□□□□ -1.33
HDLBP-238	ENST00000479894		V9GYY9	64 aa		6.67	□□□□□ -1.34
HDLBP-238	ENST00000479894		A0A1B0GU33	70 aa		6.66	□□□□□ -1.34
HDLBP-238	ENST00000479894	LINC01558	Q9Y6Z2	57 aa		6.66	□□□□□ -1.34
HDLBP-238	ENST00000479894	KRTAP8-1	Q8IUC2	63 aa		6.65	□□□□□ -1.34
HDLBP-238	ENST00000479894	PLAC4	Q8WY50	150 aa		6.65	□□□□□ -1.34
HDLBP-238	ENST00000479894	LINC01554	Q52M75	96 aa		6.63	□□□□□ -1.35
HDLBP-238	ENST00000479894	RPS28	P62857	69 aa	Known RBP	6.62	□□□□□ -1.35
HDLBP-238	ENST00000479894	LCE3B	Q5TA77	95 aa		6.62	□□□□□ -1.35
HDLBP-238	ENST00000479894	SMIM26	A0A096LP01	95 aa		6.58	□□□□□ -1.36
HDLBP-238	ENST00000479894	PRO2289	Q9P1D8	64 aa		6.54	□□□□□ -1.36
HDLBP-238	ENST00000479894		Q1T7F1	81 aa		6.53	□□□□□ -1.36
HDLBP-238	ENST00000479894	KRTAP13-4	Q3LI77	160 aa		6.49	□□□□□ -1.37
HDLBP-238	ENST00000479894	UQCR11	O14957	56 aa		6.48	□□□□□ -1.37
HDLBP-238	ENST00000479894	KRTAP12-2	P59991	146 aa		6.48	□□□□□ -1.37
HDLBP-238	ENST00000479894	SPATA8	Q6RVD6	105 aa		6.47	□□□□□ -1.37
HDLBP-238	ENST00000479894		A0A0D9SG42	100 aa		6.43	□□□□□ -1.38
HDLBP-238	ENST00000479894	MT1X	P80297	61 aa		6.43	□□□□□ -1.38
HDLBP-238	ENST00000479894	PSPHP1	O15172	72 aa		6.39	□□□□□ -1.39
HDLBP-238	ENST00000479894	CAMK2N1	Q7Z7J9	78 aa		6.38	□□□□□ -1.39
HDLBP-238	ENST00000479894	DST	Q03001	7570 aa	Known RBP	6.37	□□□□□ -1.39
HDLBP-238	ENST00000479894	KRTAP4-8	A0A0G2JLE6	195 aa		6.36	□□□□□ -1.39
HDLBP-238	ENST00000479894	SPINT4	Q6UDR6	99 aa		6.36	□□□□□ -1.39
HDLBP-238	ENST00000479894	KRTAP4-8	Q9BYQ9	185 aa		6.36	□□□□□ -1.39
HDLBP-238	ENST00000479894	MIR22HG	Q0VDD5	57 aa		6.33	□□□□□ -1.4
HDLBP-238	ENST00000479894	KRTAP4-9	Q9BYQ8	210 aa		6.3	□□□□□ -1.4
HDLBP-238	ENST00000479894		A8MU10	97 aa		6.29	□□□□□ -1.4
HDLBP-238	ENST00000479894	KRTAP12-1	P59990	96 aa		6.29	□□□□□ -1.4
HDLBP-238	ENST00000479894		A6NED7	52 aa		6.27	□□□□□ -1.41
HDLBP-238	ENST00000479894		K7ERS5	55 aa		6.27	□□□□□ -1.41
HDLBP-238	ENST00000479894	KRTAP10-12	P60413	245 aa		6.14	□□□□□ -1.43
HDLBP-238	ENST00000479894	KRTAP10-7	P60409	375 aa	Predicted RBP	6.11	□□□□□ -1.43
HDLBP-238	ENST00000479894	LCE1D	Q5T752	114 aa		6.11	□□□□□ -1.43
HDLBP-238	ENST00000479894	CDC42SE1	Q9NRR8	79 aa		6.08	□□□□□ -1.44
HDLBP-238	ENST00000479894	HMCN1	Q96RW7	5635 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms