RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 Q6ZQT0 140 aa2.9□□□□□ -1.95
SPTLC1-205ENST00000477888 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
SPTLC1-205ENST00000477888 VPS25Q9BRG1 176 aa2.9□□□□□ -1.95
SPTLC1-205ENST00000477888 A6NED7 52 aa2.89□□□□□ -1.95
SPTLC1-205ENST00000477888 TMEM256-PLSCR3K7ERE1 68 aa2.89□□□□□ -1.95
SPTLC1-205ENST00000477888 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
SPTLC1-205ENST00000477888 ORMDL1Q9P0S3 153 aa2.89□□□□□ -1.95
SPTLC1-205ENST00000477888 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
SPTLC1-205ENST00000477888 H3BQ85 93 aa2.88□□□□□ -1.95
SPTLC1-205ENST00000477888 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BKO60814 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BJP06899 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BOP23527 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BBP33778 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BDP58876 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BCP62807 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST2H2BEQ16778 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BHQ93079 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BNQ99877 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 HIST1H2BMQ99879 126 aa2.87□□□□□ -1.95
SPTLC1-205ENST00000477888 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
SPTLC1-205ENST00000477888 A0A0B4J2C4 111 aa2.85□□□□□ -1.95
SPTLC1-205ENST00000477888 K7EQZ3 153 aa2.85□□□□□ -1.95
SPTLC1-205ENST00000477888 SMIM20Q8N5G0 67 aa2.85□□□□□ -1.95
SPTLC1-205ENST00000477888 hDV103S1A0JD37 113 aa2.84□□□□□ -1.95
SPTLC1-205ENST00000477888 A8MUN3 132 aa2.84□□□□□ -1.95
SPTLC1-205ENST00000477888 DNAL4O96015 105 aa2.84□□□□□ -1.95
SPTLC1-205ENST00000477888 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
SPTLC1-205ENST00000477888 Q8N9L7 120 aa2.84□□□□□ -1.95
SPTLC1-205ENST00000477888 A0A1B0GW54 56 aa2.81□□□□□ -1.96
SPTLC1-205ENST00000477888 C9JAW5 83 aa2.81□□□□□ -1.96
SPTLC1-205ENST00000477888 H0YAA0 97 aa2.81□□□□□ -1.96
SPTLC1-205ENST00000477888 PDE6GP18545 87 aa2.81□□□□□ -1.96
SPTLC1-205ENST00000477888 TSTD3H0UI37 97 aa2.8□□□□□ -1.96
SPTLC1-205ENST00000477888 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
SPTLC1-205ENST00000477888 PRO1854Q9UHT4 67 aa2.8□□□□□ -1.96
SPTLC1-205ENST00000477888 A0A087WVE0 104 aa2.79□□□□□ -1.96
SPTLC1-205ENST00000477888 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
SPTLC1-205ENST00000477888 A0A1B0GV90 55 aa2.76□□□□□ -1.97
SPTLC1-205ENST00000477888 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SPTLC1-205ENST00000477888 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
SPTLC1-205ENST00000477888 HIST3H2BBQ8N257 126 aa2.76□□□□□ -1.97
SPTLC1-205ENST00000477888 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
SPTLC1-205ENST00000477888 A8MU10 97 aa2.75□□□□□ -1.97
SPTLC1-205ENST00000477888 HCG22E2RYF7 251 aa2.75□□□□□ -1.97
SPTLC1-205ENST00000477888 DLEU1O43261 78 aa2.75□□□□□ -1.97
SPTLC1-205ENST00000477888 COX8AP10176 69 aa2.75□□□□□ -1.97
SPTLC1-205ENST00000477888 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
SPTLC1-205ENST00000477888 MT1EP04732 61 aa2.74□□□□□ -1.97
SPTLC1-205ENST00000477888 SCGB1A1P11684 91 aa2.74□□□□□ -1.97
SPTLC1-205ENST00000477888 NREPQ16612 68 aa2.74□□□□□ -1.97
SPTLC1-205ENST00000477888 SMIM6P0DI80 62 aa2.73□□□□□ -1.97
SPTLC1-205ENST00000477888 HIGD1BQ9P298 99 aa2.73□□□□□ -1.97
SPTLC1-205ENST00000477888 LOC110117498A0A087WWA1 95 aa2.72□□□□□ -1.97
SPTLC1-205ENST00000477888 HIST1H4AP62805 103 aaKnown RBP2.72□□□□□ -1.97
SPTLC1-205ENST00000477888 COX6CP09669 75 aa2.71□□□□□ -1.98
SPTLC1-205ENST00000477888 BAALC-AS2P0C853 105 aa2.71□□□□□ -1.98
SPTLC1-205ENST00000477888 FXYD2P54710 66 aa2.7□□□□□ -1.98
SPTLC1-205ENST00000477888 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
SPTLC1-205ENST00000477888 R4GN34 69 aa2.7□□□□□ -1.98
SPTLC1-205ENST00000477888 A0A1B0GU33 70 aa2.69□□□□□ -1.98
SPTLC1-205ENST00000477888 MT1GP13640 62 aa2.69□□□□□ -1.98
SPTLC1-205ENST00000477888 C14orf144Q96I85 54 aa2.69□□□□□ -1.98
SPTLC1-205ENST00000477888 HIST1H2BLQ99880 126 aa2.69□□□□□ -1.98
SPTLC1-205ENST00000477888 H3BPC8 53 aa2.68□□□□□ -1.98
SPTLC1-205ENST00000477888 NDUFC1O43677 76 aa2.68□□□□□ -1.98
SPTLC1-205ENST00000477888 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
SPTLC1-205ENST00000477888 JMJD7-PLA2G4BH0Y9G9 81 aa2.67□□□□□ -1.98
SPTLC1-205ENST00000477888 K7ERJ3 54 aa2.66□□□□□ -1.98
SPTLC1-205ENST00000477888 M0QZ58 72 aa2.66□□□□□ -1.98
SPTLC1-205ENST00000477888 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
SPTLC1-205ENST00000477888 H3BT86 120 aa2.65□□□□□ -1.99
SPTLC1-205ENST00000477888 P0C880 135 aa2.65□□□□□ -1.99
SPTLC1-205ENST00000477888 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
SPTLC1-205ENST00000477888 C14orf132Q9NPU4 83 aa2.65□□□□□ -1.99
SPTLC1-205ENST00000477888 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
SPTLC1-205ENST00000477888 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
SPTLC1-205ENST00000477888 TAX1BP3O14907 124 aa2.63□□□□□ -1.99
SPTLC1-205ENST00000477888 MT1MQ8N339 61 aa2.63□□□□□ -1.99
SPTLC1-205ENST00000477888 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
SPTLC1-205ENST00000477888 TRAV7A0A075B6U4 112 aa2.6□□□□□ -1.99
SPTLC1-205ENST00000477888 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
SPTLC1-205ENST00000477888 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SPTLC1-205ENST00000477888 SPATA45Q537H7 98 aa2.58□□□□□ -2
SPTLC1-205ENST00000477888 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
SPTLC1-205ENST00000477888 K7EP34 96 aa2.57□□□□□ -2
SPTLC1-205ENST00000477888 K7ERU9 68 aa2.57□□□□□ -2
SPTLC1-205ENST00000477888 C20orf197Q8N268 126 aa2.57□□□□□ -2
SPTLC1-205ENST00000477888 MUC5ACP98088 5654 aa2.57□□□□□ -2
SPTLC1-205ENST00000477888 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
SPTLC1-205ENST00000477888 NAA38Q9BRA0 125 aaKnown RBP2.56□□□□□ -2
SPTLC1-205ENST00000477888 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
SPTLC1-205ENST00000477888 HSD52Q0P140 79 aa2.55□□□□□ -2
SPTLC1-205ENST00000477888 ATXN8Q156A1 80 aa2.55□□□□□ -2
SPTLC1-205ENST00000477888 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
SPTLC1-205ENST00000477888 VAMP8Q9BV40 100 aa2.55□□□□□ -2
SPTLC1-205ENST00000477888 MT1LQ93083 61 aa2.54□□□□□ -2
SPTLC1-205ENST00000477888 M0R143 59 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms