RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NEBP20929 6669 aa4.79□□□□□ -1.64
SEC13-214ENST00000476597 FAM240AA0A1B0GVK7 77 aa4.78□□□□□ -1.64
SEC13-214ENST00000476597 UQCRQO14949 82 aa4.77□□□□□ -1.65
SEC13-214ENST00000476597 ATP5EP2Q5VTU8 51 aa4.77□□□□□ -1.65
SEC13-214ENST00000476597 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
SEC13-214ENST00000476597 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
SEC13-214ENST00000476597 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
SEC13-214ENST00000476597 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
SEC13-214ENST00000476597 ATOX1O00244 68 aa4.74□□□□□ -1.65
SEC13-214ENST00000476597 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
SEC13-214ENST00000476597 H0Y9P7 68 aa4.73□□□□□ -1.65
SEC13-214ENST00000476597 NDUFC1O43677 76 aa4.71□□□□□ -1.66
SEC13-214ENST00000476597 H0YAA0 97 aa4.7□□□□□ -1.66
SEC13-214ENST00000476597 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
SEC13-214ENST00000476597 A8MUN3 132 aa4.68□□□□□ -1.66
SEC13-214ENST00000476597 KMT2DO14686 5537 aa4.66□□□□□ -1.66
SEC13-214ENST00000476597 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
SEC13-214ENST00000476597 MDN1Q9NU22 5596 aa4.65□□□□□ -1.67
SEC13-214ENST00000476597 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
SEC13-214ENST00000476597 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
SEC13-214ENST00000476597 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
SEC13-214ENST00000476597 MP68P56378 58 aa4.62□□□□□ -1.67
SEC13-214ENST00000476597 A0A1B0GV90 55 aa4.57□□□□□ -1.68
SEC13-214ENST00000476597 H3BPC8 53 aa4.56□□□□□ -1.68
SEC13-214ENST00000476597 MT1XP80297 61 aa4.54□□□□□ -1.68
SEC13-214ENST00000476597 P0C880 135 aa4.53□□□□□ -1.68
SEC13-214ENST00000476597 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
SEC13-214ENST00000476597 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
SEC13-214ENST00000476597 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
SEC13-214ENST00000476597 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
SEC13-214ENST00000476597 R4GN34 69 aa4.52□□□□□ -1.69
SEC13-214ENST00000476597 J3QR89 54 aa4.51□□□□□ -1.69
SEC13-214ENST00000476597 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
SEC13-214ENST00000476597 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
SEC13-214ENST00000476597 M0QZ58 72 aa4.48□□□□□ -1.69
SEC13-214ENST00000476597 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
SEC13-214ENST00000476597 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
SEC13-214ENST00000476597 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
SEC13-214ENST00000476597 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
SEC13-214ENST00000476597 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
SEC13-214ENST00000476597 ACYP2P14621 99 aa4.41□□□□□ -1.7
SEC13-214ENST00000476597 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
SEC13-214ENST00000476597 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
SEC13-214ENST00000476597 SPRR2EP22531 72 aa4.39□□□□□ -1.71
SEC13-214ENST00000476597 SPRR2BP35325 72 aa4.39□□□□□ -1.71
SEC13-214ENST00000476597 SPRR2AP35326 72 aa4.39□□□□□ -1.71
SEC13-214ENST00000476597 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
SEC13-214ENST00000476597 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
SEC13-214ENST00000476597 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
SEC13-214ENST00000476597 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
SEC13-214ENST00000476597 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
SEC13-214ENST00000476597 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
SEC13-214ENST00000476597 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
SEC13-214ENST00000476597 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
SEC13-214ENST00000476597 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
SEC13-214ENST00000476597 K7ERU9 68 aa4.3□□□□□ -1.72
SEC13-214ENST00000476597 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
SEC13-214ENST00000476597 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SEC13-214ENST00000476597 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SEC13-214ENST00000476597 SPRR2DP22532 72 aa4.25□□□□□ -1.73
SEC13-214ENST00000476597 SPANXA2-OT1Q8N9U9 137 aa4.25□□□□□ -1.73
SEC13-214ENST00000476597 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
SEC13-214ENST00000476597 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SEC13-214ENST00000476597 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
SEC13-214ENST00000476597 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
SEC13-214ENST00000476597 COA5Q86WW8 74 aa4.12□□□□□ -1.75
SEC13-214ENST00000476597 SEC61GP60059 68 aa4.08□□□□□ -1.76
SEC13-214ENST00000476597 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
SEC13-214ENST00000476597 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
SEC13-214ENST00000476597 A0A0D9SG42 100 aa4.06□□□□□ -1.76
SEC13-214ENST00000476597 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
SEC13-214ENST00000476597 COX7CP15954 63 aa4.04□□□□□ -1.76
SEC13-214ENST00000476597 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
SEC13-214ENST00000476597 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
SEC13-214ENST00000476597 A0A1B0GU33 70 aa4.03□□□□□ -1.76
SEC13-214ENST00000476597 MT1EP04732 61 aa4.03□□□□□ -1.76
SEC13-214ENST00000476597 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
SEC13-214ENST00000476597 H7BZZ5 65 aa4□□□□□ -1.77
SEC13-214ENST00000476597 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
SEC13-214ENST00000476597 CYSTM1Q9H1C7 97 aa3.99□□□□□ -1.77
SEC13-214ENST00000476597 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
SEC13-214ENST00000476597 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
SEC13-214ENST00000476597 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
SEC13-214ENST00000476597 MT1GP13640 62 aa3.92□□□□□ -1.78
SEC13-214ENST00000476597 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
SEC13-214ENST00000476597 A0A1B0GU69 56 aa3.91□□□□□ -1.78
SEC13-214ENST00000476597 A8MU10 97 aa3.88□□□□□ -1.79
SEC13-214ENST00000476597 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SEC13-214ENST00000476597 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
SEC13-214ENST00000476597 H3BS24 57 aa3.84□□□□□ -1.79
SEC13-214ENST00000476597 MT1LQ93083 61 aa3.84□□□□□ -1.79
SEC13-214ENST00000476597 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.79
SEC13-214ENST00000476597 MT1MQ8N339 61 aa3.83□□□□□ -1.8
SEC13-214ENST00000476597 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
SEC13-214ENST00000476597 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
SEC13-214ENST00000476597 TNP1P09430 55 aa3.81□□□□□ -1.8
SEC13-214ENST00000476597 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
SEC13-214ENST00000476597 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
SEC13-214ENST00000476597 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
SEC13-214ENST00000476597 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms