RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
CCM2-208ENST00000476594 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
CCM2-208ENST00000476594 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
CCM2-208ENST00000476594 ATOX1O00244 68 aa4.8□□□□□ -1.64
CCM2-208ENST00000476594 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
CCM2-208ENST00000476594 FAM236AA0A1B0GUQ0 79 aa4.79□□□□□ -1.64
CCM2-208ENST00000476594 FAM236BA0A1B0GV22 79 aa4.79□□□□□ -1.64
CCM2-208ENST00000476594 UQCRQO14949 82 aa4.79□□□□□ -1.64
CCM2-208ENST00000476594 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
CCM2-208ENST00000476594 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
CCM2-208ENST00000476594 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
CCM2-208ENST00000476594 J3QR89 54 aa4.76□□□□□ -1.65
CCM2-208ENST00000476594 LCA10Q71F78 164 aa4.75□□□□□ -1.65
CCM2-208ENST00000476594 NEBP20929 6669 aa4.74□□□□□ -1.65
CCM2-208ENST00000476594 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
CCM2-208ENST00000476594 H0Y9P7 68 aa4.74□□□□□ -1.65
CCM2-208ENST00000476594 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
CCM2-208ENST00000476594 MP68P56378 58 aa4.71□□□□□ -1.66
CCM2-208ENST00000476594 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
CCM2-208ENST00000476594 A0A087WVE0 104 aa4.7□□□□□ -1.66
CCM2-208ENST00000476594 A0A1B0GV90 55 aa4.7□□□□□ -1.66
CCM2-208ENST00000476594 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
CCM2-208ENST00000476594 A8MUN3 132 aa4.69□□□□□ -1.66
CCM2-208ENST00000476594 NDUFC1O43677 76 aa4.68□□□□□ -1.66
CCM2-208ENST00000476594 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
CCM2-208ENST00000476594 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
CCM2-208ENST00000476594 IMUPQ9GZP8 106 aa4.66□□□□□ -1.66
CCM2-208ENST00000476594 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
CCM2-208ENST00000476594 H3BPC8 53 aa4.64□□□□□ -1.67
CCM2-208ENST00000476594 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
CCM2-208ENST00000476594 Q5VV11 94 aa4.64□□□□□ -1.67
CCM2-208ENST00000476594 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
CCM2-208ENST00000476594 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
CCM2-208ENST00000476594 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
CCM2-208ENST00000476594 H0YAA0 97 aa4.59□□□□□ -1.67
CCM2-208ENST00000476594 A6NN06 94 aa4.57□□□□□ -1.68
CCM2-208ENST00000476594 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
CCM2-208ENST00000476594 K7ERU9 68 aa4.54□□□□□ -1.68
CCM2-208ENST00000476594 C20orf197Q8N268 126 aa4.54□□□□□ -1.68
CCM2-208ENST00000476594 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
CCM2-208ENST00000476594 MT1BP07438 61 aa4.53□□□□□ -1.68
CCM2-208ENST00000476594 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
CCM2-208ENST00000476594 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
CCM2-208ENST00000476594 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
CCM2-208ENST00000476594 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
CCM2-208ENST00000476594 TRAV7A0A075B6U4 112 aa4.47□□□□□ -1.69
CCM2-208ENST00000476594 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
CCM2-208ENST00000476594 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
CCM2-208ENST00000476594 ACYP2P14621 99 aa4.46□□□□□ -1.7
CCM2-208ENST00000476594 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
CCM2-208ENST00000476594 R4GN34 69 aa4.46□□□□□ -1.7
CCM2-208ENST00000476594 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
CCM2-208ENST00000476594 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
CCM2-208ENST00000476594 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
CCM2-208ENST00000476594 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
CCM2-208ENST00000476594 M0QZ58 72 aa4.39□□□□□ -1.71
CCM2-208ENST00000476594 P0C880 135 aa4.37□□□□□ -1.71
CCM2-208ENST00000476594 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
CCM2-208ENST00000476594 SPANXA2-OT1Q8N9U9 137 aa4.33□□□□□ -1.72
CCM2-208ENST00000476594 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
CCM2-208ENST00000476594 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
CCM2-208ENST00000476594 KMT2DO14686 5537 aa4.3□□□□□ -1.72
CCM2-208ENST00000476594 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
CCM2-208ENST00000476594 MT1XP80297 61 aa4.26□□□□□ -1.73
CCM2-208ENST00000476594 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
CCM2-208ENST00000476594 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
CCM2-208ENST00000476594 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
CCM2-208ENST00000476594 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
CCM2-208ENST00000476594 SEC61GP60059 68 aa4.21□□□□□ -1.74
CCM2-208ENST00000476594 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
CCM2-208ENST00000476594 COX7CP15954 63 aa4.19□□□□□ -1.74
CCM2-208ENST00000476594 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
CCM2-208ENST00000476594 COA5Q86WW8 74 aa4.18□□□□□ -1.74
CCM2-208ENST00000476594 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
CCM2-208ENST00000476594 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
CCM2-208ENST00000476594 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
CCM2-208ENST00000476594 SPRR2EP22531 72 aa4.11□□□□□ -1.75
CCM2-208ENST00000476594 SPRR2BP35325 72 aa4.11□□□□□ -1.75
CCM2-208ENST00000476594 SPRR2AP35326 72 aa4.11□□□□□ -1.75
CCM2-208ENST00000476594 H7BZZ5 65 aa4.08□□□□□ -1.76
CCM2-208ENST00000476594 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
CCM2-208ENST00000476594 A0A1B0GU33 70 aa4.04□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
CCM2-208ENST00000476594 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
CCM2-208ENST00000476594 A0A0D9SG42 100 aa4.02□□□□□ -1.77
CCM2-208ENST00000476594 A0A1B0GU69 56 aa4.02□□□□□ -1.77
CCM2-208ENST00000476594 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
CCM2-208ENST00000476594 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
CCM2-208ENST00000476594 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
CCM2-208ENST00000476594 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
CCM2-208ENST00000476594 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
CCM2-208ENST00000476594 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
CCM2-208ENST00000476594 SPRR2DP22532 72 aa3.98□□□□□ -1.77
CCM2-208ENST00000476594 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
CCM2-208ENST00000476594 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
CCM2-208ENST00000476594 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms