RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
SMARCE1-208ENST00000474246 DSCR10P59022 87 aa3.24□□□□□ -1.89
SMARCE1-208ENST00000474246 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
SMARCE1-208ENST00000474246 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
SMARCE1-208ENST00000474246 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
SMARCE1-208ENST00000474246 TNXBP22105 4242 aa3.22□□□□□ -1.89
SMARCE1-208ENST00000474246 GVQW2A0A096LPI5 108 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1-208ENST00000474246 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
SMARCE1-208ENST00000474246 K7EQZ3 153 aa3.21□□□□□ -1.9
SMARCE1-208ENST00000474246 I3L2K1 104 aa3.2□□□□□ -1.9
SMARCE1-208ENST00000474246 APLNQ9ULZ1 77 aa3.2□□□□□ -1.9
SMARCE1-208ENST00000474246 MINOS1Q5TGZ0 78 aa3.19□□□□□ -1.9
SMARCE1-208ENST00000474246 C10orf99Q6UWK7 81 aa3.19□□□□□ -1.9
SMARCE1-208ENST00000474246 LEAP2Q969E1 77 aa3.19□□□□□ -1.9
SMARCE1-208ENST00000474246 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
SMARCE1-208ENST00000474246 C6orf48Q9UBA6 75 aa3.17□□□□□ -1.9
SMARCE1-208ENST00000474246 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-208ENST00000474246 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
SMARCE1-208ENST00000474246 USH2AO75445 5202 aa3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 IGKV2-24A0A0C4DH68 120 aa3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 IGLV5-48A0A075B6I7 105 aa3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 PCOTHQ58A44 107 aa3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
SMARCE1-208ENST00000474246 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.9
SMARCE1-208ENST00000474246 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
SMARCE1-208ENST00000474246 WFDC13Q8IUB5 93 aa3.14□□□□□ -1.91
SMARCE1-208ENST00000474246 H3BUX3 64 aa3.13□□□□□ -1.91
SMARCE1-208ENST00000474246 M0QY20 66 aa3.13□□□□□ -1.91
SMARCE1-208ENST00000474246 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
SMARCE1-208ENST00000474246 WFDC10BQ8IUB3 73 aa3.12□□□□□ -1.91
SMARCE1-208ENST00000474246 IGFL1Q6UW32 110 aa3.11□□□□□ -1.91
SMARCE1-208ENST00000474246 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
SMARCE1-208ENST00000474246 H0YAA0 97 aa3.1□□□□□ -1.91
SMARCE1-208ENST00000474246 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
SMARCE1-208ENST00000474246 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
SMARCE1-208ENST00000474246 COX6A2Q02221 97 aa3.08□□□□□ -1.92
SMARCE1-208ENST00000474246 UBE2DNLQ8IWF7 75 aa3.08□□□□□ -1.92
SMARCE1-208ENST00000474246 TMEM167AQ8TBQ9 72 aa3.07□□□□□ -1.92
SMARCE1-208ENST00000474246 SPINK13Q1W4C9 94 aa3.06□□□□□ -1.92
SMARCE1-208ENST00000474246 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 WT1-ASQ06250 92 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 USMG5Q96IX5 58 aa3.05□□□□□ -1.92
SMARCE1-208ENST00000474246 KRTAP13-2Q52LG2 175 aa3.04□□□□□ -1.92
SMARCE1-208ENST00000474246 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
SMARCE1-208ENST00000474246 Q6ZSA8 131 aa3.02□□□□□ -1.93
SMARCE1-208ENST00000474246 KAAG1Q9UBP8 84 aa3.02□□□□□ -1.93
SMARCE1-208ENST00000474246 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
SMARCE1-208ENST00000474246 RPL39P5Q59GN2 51 aa3.01□□□□□ -1.93
SMARCE1-208ENST00000474246 PRR9Q5T870 116 aa3.01□□□□□ -1.93
SMARCE1-208ENST00000474246 DEFB131AP59861 70 aa3.01□□□□□ -1.93
SMARCE1-208ENST00000474246 KMT2DO14686 5537 aa3□□□□□ -1.93
SMARCE1-208ENST00000474246 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
SMARCE1-208ENST00000474246 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
SMARCE1-208ENST00000474246 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
SMARCE1-208ENST00000474246 K7EIM0 57 aa2.98□□□□□ -1.93
SMARCE1-208ENST00000474246 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-208ENST00000474246 LPAP08519 4548 aa2.97□□□□□ -1.93
SMARCE1-208ENST00000474246 H1FX-AS1Q4G0G2 97 aa2.96□□□□□ -1.93
SMARCE1-208ENST00000474246 DEFB136Q30KP8 78 aa2.96□□□□□ -1.94
SMARCE1-208ENST00000474246 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
SMARCE1-208ENST00000474246 A8MTW9 85 aa2.94□□□□□ -1.94
SMARCE1-208ENST00000474246 DEFB130BP0DP73 79 aa2.94□□□□□ -1.94
SMARCE1-208ENST00000474246 DEFB130AP0DP74 79 aa2.94□□□□□ -1.94
SMARCE1-208ENST00000474246 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
SMARCE1-208ENST00000474246 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
SMARCE1-208ENST00000474246 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SMARCE1-208ENST00000474246 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
SMARCE1-208ENST00000474246 UNQ6190/PRO20217Q6UXQ8 127 aa2.91□□□□□ -1.94
SMARCE1-208ENST00000474246 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.94
SMARCE1-208ENST00000474246 MT3P25713 68 aa2.9□□□□□ -1.94
SMARCE1-208ENST00000474246 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.94
SMARCE1-208ENST00000474246 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SMARCE1-208ENST00000474246 CLPSL2Q6UWE3 100 aa2.87□□□□□ -1.95
SMARCE1-208ENST00000474246 DEFB135Q30KP9 77 aa2.86□□□□□ -1.95
SMARCE1-208ENST00000474246 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
SMARCE1-208ENST00000474246 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
SMARCE1-208ENST00000474246 H3BUA1 57 aa2.84□□□□□ -1.95
SMARCE1-208ENST00000474246 DEFB105AQ8NG35 78 aa2.83□□□□□ -1.96
SMARCE1-208ENST00000474246 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
SMARCE1-208ENST00000474246 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SMARCE1-208ENST00000474246 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
SMARCE1-208ENST00000474246 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
SMARCE1-208ENST00000474246 MT1HP80294 61 aa2.78□□□□□ -1.96
SMARCE1-208ENST00000474246 KLK9Q2XQG4 91 aa2.78□□□□□ -1.96
SMARCE1-208ENST00000474246 PRLHP81277 87 aa2.77□□□□□ -1.97
SMARCE1-208ENST00000474246 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SMARCE1-208ENST00000474246 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
SMARCE1-208ENST00000474246 SPRR1AP35321 89 aa2.76□□□□□ -1.97
SMARCE1-208ENST00000474246 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
SMARCE1-208ENST00000474246 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
SMARCE1-208ENST00000474246 M0R2T5 61 aa2.75□□□□□ -1.97
SMARCE1-208ENST00000474246 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SMARCE1-208ENST00000474246 DEFB4AO15263 64 aa2.74□□□□□ -1.97
SMARCE1-208ENST00000474246 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SMARCE1-208ENST00000474246 PRO0255Q9UI72 69 aa2.74□□□□□ -1.97
SMARCE1-208ENST00000474246 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms