RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TRAV7A0A075B6U4 112 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 IGKV3D-7A0A0C4DH55 119 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 H0YGX0 51 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 Q1T7F1 81 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 ATP5EP2Q5VTU8 51 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 LCA10Q71F78 164 aa3.09□□□□□ -1.91
HDAC1-204ENST00000471488 TRIAP1O43715 76 aa3.08□□□□□ -1.92
HDAC1-204ENST00000471488 COX6CP09669 75 aa3.08□□□□□ -1.92
HDAC1-204ENST00000471488 RBM3P98179 157 aaKnown RBP3.08□□□□□ -1.92
HDAC1-204ENST00000471488 C20orf197Q8N268 126 aa3.08□□□□□ -1.92
HDAC1-204ENST00000471488 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
HDAC1-204ENST00000471488 TMEM256-PLSCR3K7ERE1 68 aa3.07□□□□□ -1.92
HDAC1-204ENST00000471488 NDUFB1O75438 58 aa3.07□□□□□ -1.92
HDAC1-204ENST00000471488 DNAL4O96015 105 aa3.07□□□□□ -1.92
HDAC1-204ENST00000471488 IGKV2-30P06310 120 aa3.07□□□□□ -1.92
HDAC1-204ENST00000471488 A8MUN3 132 aa3.06□□□□□ -1.92
HDAC1-204ENST00000471488 SPRR2DP22532 72 aa3.05□□□□□ -1.92
HDAC1-204ENST00000471488 ORMDL1Q9P0S3 153 aa3.05□□□□□ -1.92
HDAC1-204ENST00000471488 C7orf65Q6ZTY9 151 aa3.04□□□□□ -1.92
HDAC1-204ENST00000471488 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
HDAC1-204ENST00000471488 A0A087WVE0 104 aa3.03□□□□□ -1.92
HDAC1-204ENST00000471488 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
HDAC1-204ENST00000471488 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
HDAC1-204ENST00000471488 CXCL6P80162 114 aa3.02□□□□□ -1.93
HDAC1-204ENST00000471488 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
HDAC1-204ENST00000471488 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
HDAC1-204ENST00000471488 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
HDAC1-204ENST00000471488 hDV103S1A0JD37 113 aa3□□□□□ -1.93
HDAC1-204ENST00000471488 S4R3F8 94 aa3□□□□□ -1.93
HDAC1-204ENST00000471488 BAALC-AS2P0C853 105 aa2.99□□□□□ -1.93
HDAC1-204ENST00000471488 MP68P56378 58 aa2.99□□□□□ -1.93
HDAC1-204ENST00000471488 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
HDAC1-204ENST00000471488 H3BQ85 93 aa2.98□□□□□ -1.93
HDAC1-204ENST00000471488 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
HDAC1-204ENST00000471488 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
HDAC1-204ENST00000471488 MRPL34Q9BQ48 92 aaKnown RBP2.98□□□□□ -1.93
HDAC1-204ENST00000471488 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
HDAC1-204ENST00000471488 CYP4F30PQ9H0H9 118 aa2.97□□□□□ -1.93
HDAC1-204ENST00000471488 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
HDAC1-204ENST00000471488 Q6ZQT0 140 aa2.96□□□□□ -1.94
HDAC1-204ENST00000471488 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
HDAC1-204ENST00000471488 TMEM254Q8TBM7 123 aa2.95□□□□□ -1.94
HDAC1-204ENST00000471488 K7EQZ3 153 aa2.94□□□□□ -1.94
HDAC1-204ENST00000471488 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
HDAC1-204ENST00000471488 MMP24-AS1A0A0U1RRL7 71 aa2.93□□□□□ -1.94
HDAC1-204ENST00000471488 HCG22E2RYF7 251 aa2.93□□□□□ -1.94
HDAC1-204ENST00000471488 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
HDAC1-204ENST00000471488 A8MU10 97 aa2.92□□□□□ -1.94
HDAC1-204ENST00000471488 PSPHP1O15172 72 aa2.92□□□□□ -1.94
HDAC1-204ENST00000471488 Q5W150 140 aa2.92□□□□□ -1.94
HDAC1-204ENST00000471488 UBL5Q9BZL1 73 aa2.92□□□□□ -1.94
HDAC1-204ENST00000471488 C14orf132Q9NPU4 83 aa2.92□□□□□ -1.94
HDAC1-204ENST00000471488 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
HDAC1-204ENST00000471488 JMJD7-PLA2G4BH0Y9G9 81 aa2.91□□□□□ -1.94
HDAC1-204ENST00000471488 NREPQ16612 68 aa2.91□□□□□ -1.94
HDAC1-204ENST00000471488 C1orf64Q8NEQ6 169 aa2.91□□□□□ -1.94
HDAC1-204ENST00000471488 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
HDAC1-204ENST00000471488 SPTSSBQ8NFR3 76 aa2.89□□□□□ -1.95
HDAC1-204ENST00000471488 OCR1Q9BZK8 76 aa2.88□□□□□ -1.95
HDAC1-204ENST00000471488 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
HDAC1-204ENST00000471488 LOC110117498A0A087WWA1 95 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 KRTAP3-1Q9BYR8 98 aa2.87□□□□□ -1.95
HDAC1-204ENST00000471488 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
HDAC1-204ENST00000471488 BPY2O14599 106 aa2.86□□□□□ -1.95
HDAC1-204ENST00000471488 MT1XP80297 61 aa2.86□□□□□ -1.95
HDAC1-204ENST00000471488 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
HDAC1-204ENST00000471488 A0A1B0GW54 56 aa2.85□□□□□ -1.95
HDAC1-204ENST00000471488 PDE6GP18545 87 aa2.84□□□□□ -1.95
HDAC1-204ENST00000471488 Q8N9L7 120 aa2.84□□□□□ -1.95
HDAC1-204ENST00000471488 A6NED7 52 aa2.83□□□□□ -1.96
HDAC1-204ENST00000471488 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
HDAC1-204ENST00000471488 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
HDAC1-204ENST00000471488 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
HDAC1-204ENST00000471488 KRTAP3-3Q9BYR6 98 aa2.81□□□□□ -1.96
HDAC1-204ENST00000471488 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
HDAC1-204ENST00000471488 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
HDAC1-204ENST00000471488 ADM2Q7Z4H4 148 aa2.79□□□□□ -1.96
HDAC1-204ENST00000471488 LINC00208Q96KT6 92 aa2.78□□□□□ -1.96
HDAC1-204ENST00000471488 ROMO1P60602 79 aa2.76□□□□□ -1.97
HDAC1-204ENST00000471488 H3BPC8 53 aa2.75□□□□□ -1.97
HDAC1-204ENST00000471488 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
HDAC1-204ENST00000471488 R4GN34 69 aa2.75□□□□□ -1.97
HDAC1-204ENST00000471488 M0QZ58 72 aa2.72□□□□□ -1.97
HDAC1-204ENST00000471488 MT4P47944 62 aa2.72□□□□□ -1.97
HDAC1-204ENST00000471488 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
HDAC1-204ENST00000471488 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
HDAC1-204ENST00000471488 H0YAA0 97 aa2.7□□□□□ -1.98
HDAC1-204ENST00000471488 COA5Q86WW8 74 aa2.7□□□□□ -1.98
HDAC1-204ENST00000471488 H0Y9P7 68 aa2.69□□□□□ -1.98
HDAC1-204ENST00000471488 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
HDAC1-204ENST00000471488 P0C880 135 aa2.68□□□□□ -1.98
HDAC1-204ENST00000471488 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
HDAC1-204ENST00000471488 MIR22HGQ0VDD5 57 aa2.68□□□□□ -1.98
HDAC1-204ENST00000471488 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
HDAC1-204ENST00000471488 TP53AIP1Q9HCN2 124 aa2.67□□□□□ -1.98
HDAC1-204ENST00000471488 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms