RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
VAMP3-202ENST00000470357 H3BPC8 53 aa3.6□□□□□ -1.83
VAMP3-202ENST00000470357 COX7CP15954 63 aa3.6□□□□□ -1.83
VAMP3-202ENST00000470357 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
VAMP3-202ENST00000470357 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
VAMP3-202ENST00000470357 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
VAMP3-202ENST00000470357 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
VAMP3-202ENST00000470357 H0Y9P7 68 aa3.57□□□□□ -1.84
VAMP3-202ENST00000470357 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
VAMP3-202ENST00000470357 LOC101927531A0A1B0GV80 90 aa3.56□□□□□ -1.84
VAMP3-202ENST00000470357 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
VAMP3-202ENST00000470357 NDUFC1O43677 76 aa3.55□□□□□ -1.84
VAMP3-202ENST00000470357 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
VAMP3-202ENST00000470357 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
VAMP3-202ENST00000470357 C1orf64Q8NEQ6 169 aa3.54□□□□□ -1.84
VAMP3-202ENST00000470357 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
VAMP3-202ENST00000470357 Q5W150 140 aa3.53□□□□□ -1.84
VAMP3-202ENST00000470357 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
VAMP3-202ENST00000470357 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
VAMP3-202ENST00000470357 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
VAMP3-202ENST00000470357 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
VAMP3-202ENST00000470357 SNURFQ9Y675 71 aa3.5□□□□□ -1.85
VAMP3-202ENST00000470357 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
VAMP3-202ENST00000470357 SPINK7P58062 85 aa3.48□□□□□ -1.85
VAMP3-202ENST00000470357 H7BZZ5 65 aa3.46□□□□□ -1.86
VAMP3-202ENST00000470357 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
VAMP3-202ENST00000470357 TMEM258P61165 79 aa3.46□□□□□ -1.86
VAMP3-202ENST00000470357 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
VAMP3-202ENST00000470357 SPANXA2-OT1Q8N9U9 137 aa3.46□□□□□ -1.86
VAMP3-202ENST00000470357 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
VAMP3-202ENST00000470357 HRES1P13985 223 aa3.43□□□□□ -1.86
VAMP3-202ENST00000470357 A8MUN3 132 aa3.42□□□□□ -1.86
VAMP3-202ENST00000470357 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
VAMP3-202ENST00000470357 FAM236DA0A1B0GTK5 79 aa3.41□□□□□ -1.86
VAMP3-202ENST00000470357 FAM236CP0DP71 79 aa3.41□□□□□ -1.86
VAMP3-202ENST00000470357 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
VAMP3-202ENST00000470357 CYSTM1Q9H1C7 97 aa3.41□□□□□ -1.86
VAMP3-202ENST00000470357 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
VAMP3-202ENST00000470357 ACYP2P14621 99 aa3.39□□□□□ -1.87
VAMP3-202ENST00000470357 C4orf26Q17RF5 130 aa3.39□□□□□ -1.87
VAMP3-202ENST00000470357 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
VAMP3-202ENST00000470357 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
VAMP3-202ENST00000470357 V9GYY9 64 aa3.35□□□□□ -1.87
VAMP3-202ENST00000470357 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
VAMP3-202ENST00000470357 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
VAMP3-202ENST00000470357 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
VAMP3-202ENST00000470357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
VAMP3-202ENST00000470357 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
VAMP3-202ENST00000470357 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
VAMP3-202ENST00000470357 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
VAMP3-202ENST00000470357 RPS28P62857 69 aaKnown RBP3.32□□□□□ -1.88
VAMP3-202ENST00000470357 MT1HP80294 61 aa3.32□□□□□ -1.88
VAMP3-202ENST00000470357 COA5Q86WW8 74 aa3.32□□□□□ -1.88
VAMP3-202ENST00000470357 USH2AO75445 5202 aa3.32□□□□□ -1.88
VAMP3-202ENST00000470357 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
VAMP3-202ENST00000470357 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
VAMP3-202ENST00000470357 S4R3F8 94 aa3.29□□□□□ -1.88
VAMP3-202ENST00000470357 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
VAMP3-202ENST00000470357 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
VAMP3-202ENST00000470357 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
VAMP3-202ENST00000470357 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
VAMP3-202ENST00000470357 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
VAMP3-202ENST00000470357 LCA10Q71F78 164 aa3.25□□□□□ -1.89
VAMP3-202ENST00000470357 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
VAMP3-202ENST00000470357 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
VAMP3-202ENST00000470357 PRR15LQ9BU68 103 aa3.2□□□□□ -1.9
VAMP3-202ENST00000470357 Q1T7F1 81 aa3.19□□□□□ -1.9
VAMP3-202ENST00000470357 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
VAMP3-202ENST00000470357 H0YAA0 97 aa3.18□□□□□ -1.9
VAMP3-202ENST00000470357 M0R2T5 61 aa3.18□□□□□ -1.9
VAMP3-202ENST00000470357 A0A1B0GU69 56 aa3.17□□□□□ -1.9
VAMP3-202ENST00000470357 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
VAMP3-202ENST00000470357 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
VAMP3-202ENST00000470357 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
VAMP3-202ENST00000470357 PSPHP1O15172 72 aa3.1□□□□□ -1.91
VAMP3-202ENST00000470357 A0A1B0GU33 70 aa3.09□□□□□ -1.91
VAMP3-202ENST00000470357 CRIPTQ9P021 101 aa3.09□□□□□ -1.91
VAMP3-202ENST00000470357 UQCR11O14957 56 aa3.08□□□□□ -1.92
VAMP3-202ENST00000470357 M0QZ58 72 aa3.07□□□□□ -1.92
VAMP3-202ENST00000470357 Q5VV11 94 aa3.07□□□□□ -1.92
VAMP3-202ENST00000470357 NEBP20929 6669 aa3.07□□□□□ -1.92
VAMP3-202ENST00000470357 P0C880 135 aa3.06□□□□□ -1.92
VAMP3-202ENST00000470357 R4GN34 69 aa3.05□□□□□ -1.92
VAMP3-202ENST00000470357 A6NED7 52 aa3.04□□□□□ -1.92
VAMP3-202ENST00000470357 MT2AP02795 61 aa3.03□□□□□ -1.92
VAMP3-202ENST00000470357 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
VAMP3-202ENST00000470357 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
VAMP3-202ENST00000470357 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
VAMP3-202ENST00000470357 MT1FP04733 61 aa3.01□□□□□ -1.93
VAMP3-202ENST00000470357 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
VAMP3-202ENST00000470357 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
VAMP3-202ENST00000470357 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
VAMP3-202ENST00000470357 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
VAMP3-202ENST00000470357 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
VAMP3-202ENST00000470357 PRO0628Q9UI54 55 aa2.97□□□□□ -1.93
VAMP3-202ENST00000470357 A6NN06 94 aa2.96□□□□□ -1.94
VAMP3-202ENST00000470357 K7ERS5 55 aa2.96□□□□□ -1.94
VAMP3-202ENST00000470357 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
VAMP3-202ENST00000470357 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
VAMP3-202ENST00000470357 LINC01554Q52M75 96 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms