RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 A6NN06 94 aa7.28□□□□□ -1.24
COL9A3-208ENST00000469802 CYP4F30PQ9H0H9 118 aa7.28□□□□□ -1.24
COL9A3-208ENST00000469802 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
COL9A3-208ENST00000469802 A0A087WVE0 104 aa7.26□□□□□ -1.25
COL9A3-208ENST00000469802 LOC101927531A0A1B0GV80 90 aa7.26□□□□□ -1.25
COL9A3-208ENST00000469802 UQCRQO14949 82 aa7.26□□□□□ -1.25
COL9A3-208ENST00000469802 ATOX1O00244 68 aa7.23□□□□□ -1.25
COL9A3-208ENST00000469802 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
COL9A3-208ENST00000469802 NEBP20929 6669 aa7.2□□□□□ -1.26
COL9A3-208ENST00000469802 H0Y9P7 68 aa7.2□□□□□ -1.26
COL9A3-208ENST00000469802 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
COL9A3-208ENST00000469802 K7ERU9 68 aa7.13□□□□□ -1.27
COL9A3-208ENST00000469802 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
COL9A3-208ENST00000469802 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
COL9A3-208ENST00000469802 MP68P56378 58 aa7.12□□□□□ -1.27
COL9A3-208ENST00000469802 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
COL9A3-208ENST00000469802 H0YAA0 97 aa7.09□□□□□ -1.27
COL9A3-208ENST00000469802 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
COL9A3-208ENST00000469802 IMUPQ9GZP8 106 aa7.09□□□□□ -1.27
COL9A3-208ENST00000469802 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
COL9A3-208ENST00000469802 NDUFC1O43677 76 aa7.05□□□□□ -1.28
COL9A3-208ENST00000469802 H3BPC8 53 aa7.04□□□□□ -1.28
COL9A3-208ENST00000469802 A8MUN3 132 aa7.02□□□□□ -1.29
COL9A3-208ENST00000469802 MT-ATP8P03928 68 aa7□□□□□ -1.29
COL9A3-208ENST00000469802 KMT2DO14686 5537 aa6.97□□□□□ -1.29
COL9A3-208ENST00000469802 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
COL9A3-208ENST00000469802 SMIM20Q8N5G0 67 aa6.95□□□□□ -1.3
COL9A3-208ENST00000469802 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
COL9A3-208ENST00000469802 TRAV7A0A075B6U4 112 aa6.9□□□□□ -1.3
COL9A3-208ENST00000469802 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
COL9A3-208ENST00000469802 MT1XP80297 61 aa6.88□□□□□ -1.31
COL9A3-208ENST00000469802 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
COL9A3-208ENST00000469802 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
COL9A3-208ENST00000469802 P0C880 135 aa6.81□□□□□ -1.32
COL9A3-208ENST00000469802 R4GN34 69 aa6.79□□□□□ -1.32
COL9A3-208ENST00000469802 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
COL9A3-208ENST00000469802 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
COL9A3-208ENST00000469802 SPRR2FQ96RM1 72 aa6.76□□□□□ -1.33
COL9A3-208ENST00000469802 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
COL9A3-208ENST00000469802 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
COL9A3-208ENST00000469802 M0QZ58 72 aa6.73□□□□□ -1.33
COL9A3-208ENST00000469802 ACYP2P14621 99 aa6.73□□□□□ -1.33
COL9A3-208ENST00000469802 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
COL9A3-208ENST00000469802 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
COL9A3-208ENST00000469802 SPRR2EP22531 72 aa6.69□□□□□ -1.34
COL9A3-208ENST00000469802 SPRR2BP35325 72 aa6.69□□□□□ -1.34
COL9A3-208ENST00000469802 SPRR2AP35326 72 aa6.69□□□□□ -1.34
COL9A3-208ENST00000469802 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
COL9A3-208ENST00000469802 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
COL9A3-208ENST00000469802 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
COL9A3-208ENST00000469802 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
COL9A3-208ENST00000469802 SPANXA2-OT1Q8N9U9 137 aa6.64□□□□□ -1.35
COL9A3-208ENST00000469802 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
COL9A3-208ENST00000469802 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
COL9A3-208ENST00000469802 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
COL9A3-208ENST00000469802 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
COL9A3-208ENST00000469802 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
COL9A3-208ENST00000469802 COX7CP15954 63 aa6.56□□□□□ -1.36
COL9A3-208ENST00000469802 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
COL9A3-208ENST00000469802 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
COL9A3-208ENST00000469802 SPRR2DP22532 72 aa6.47□□□□□ -1.37
COL9A3-208ENST00000469802 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
COL9A3-208ENST00000469802 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
COL9A3-208ENST00000469802 COA5Q86WW8 74 aa6.44□□□□□ -1.38
COL9A3-208ENST00000469802 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
COL9A3-208ENST00000469802 H7BZZ5 65 aa6.41□□□□□ -1.38
COL9A3-208ENST00000469802 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
COL9A3-208ENST00000469802 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
COL9A3-208ENST00000469802 SEC61GP60059 68 aa6.31□□□□□ -1.4
COL9A3-208ENST00000469802 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
COL9A3-208ENST00000469802 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
COL9A3-208ENST00000469802 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
COL9A3-208ENST00000469802 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
COL9A3-208ENST00000469802 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
COL9A3-208ENST00000469802 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
COL9A3-208ENST00000469802 A0A1B0GU33 70 aa6.14□□□□□ -1.43
COL9A3-208ENST00000469802 A0A1B0GU69 56 aa6.13□□□□□ -1.43
COL9A3-208ENST00000469802 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
COL9A3-208ENST00000469802 MT1EP04732 61 aa6.1□□□□□ -1.43
COL9A3-208ENST00000469802 A0A0D9SG42 100 aa6.08□□□□□ -1.44
COL9A3-208ENST00000469802 TMEM258P61165 79 aa6.08□□□□□ -1.44
COL9A3-208ENST00000469802 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
COL9A3-208ENST00000469802 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
COL9A3-208ENST00000469802 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
COL9A3-208ENST00000469802 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
COL9A3-208ENST00000469802 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
COL9A3-208ENST00000469802 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
COL9A3-208ENST00000469802 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
COL9A3-208ENST00000469802 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
COL9A3-208ENST00000469802 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
COL9A3-208ENST00000469802 MT1GP13640 62 aa5.9□□□□□ -1.46
COL9A3-208ENST00000469802 GPR98Q8WXG9 6306 aa5.9□□□□□ -1.47
COL9A3-208ENST00000469802 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
COL9A3-208ENST00000469802 A8MU10 97 aa5.88□□□□□ -1.47
COL9A3-208ENST00000469802 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
COL9A3-208ENST00000469802 MT1MQ8N339 61 aa5.81□□□□□ -1.48
COL9A3-208ENST00000469802 MT1LQ93083 61 aa5.81□□□□□ -1.48
COL9A3-208ENST00000469802 UQCR11O14957 56 aa5.8□□□□□ -1.48
COL9A3-208ENST00000469802 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
COL9A3-208ENST00000469802 V9GYY9 64 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms