RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 A8MUU9 505 aa6.27□□□□□ -1.4
APTX-213ENST00000465003 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
APTX-213ENST00000465003 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
APTX-213ENST00000465003 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
APTX-213ENST00000465003 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
APTX-213ENST00000465003 A8MU10 97 aa6.24□□□□□ -1.41
APTX-213ENST00000465003 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
APTX-213ENST00000465003 A6NED7 52 aa6.21□□□□□ -1.42
APTX-213ENST00000465003 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
APTX-213ENST00000465003 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
APTX-213ENST00000465003 WFDC13Q8IUB5 93 aa6.2□□□□□ -1.42
APTX-213ENST00000465003 LINC00208Q96KT6 92 aa6.2□□□□□ -1.42
APTX-213ENST00000465003 H3BPC8 53 aa6.18□□□□□ -1.42
APTX-213ENST00000465003 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
APTX-213ENST00000465003 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
APTX-213ENST00000465003 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
APTX-213ENST00000465003 MP68P56378 58 aa6.13□□□□□ -1.43
APTX-213ENST00000465003 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
APTX-213ENST00000465003 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
APTX-213ENST00000465003 Q5W150 140 aa6.08□□□□□ -1.44
APTX-213ENST00000465003 SPINK7P58062 85 aa6.06□□□□□ -1.44
APTX-213ENST00000465003 HRES1P13985 223 aa6.05□□□□□ -1.44
APTX-213ENST00000465003 MT1HP80294 61 aa6.05□□□□□ -1.44
APTX-213ENST00000465003 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
APTX-213ENST00000465003 COA5Q86WW8 74 aa6.03□□□□□ -1.44
APTX-213ENST00000465003 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
APTX-213ENST00000465003 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
APTX-213ENST00000465003 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
APTX-213ENST00000465003 M0R2T5 61 aa5.97□□□□□ -1.45
APTX-213ENST00000465003 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
APTX-213ENST00000465003 H0Y9P7 68 aa5.95□□□□□ -1.46
APTX-213ENST00000465003 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
APTX-213ENST00000465003 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
APTX-213ENST00000465003 TP53AIP1Q9HCN2 124 aa5.91□□□□□ -1.46
APTX-213ENST00000465003 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
APTX-213ENST00000465003 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
APTX-213ENST00000465003 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
APTX-213ENST00000465003 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
APTX-213ENST00000465003 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.47
APTX-213ENST00000465003 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
APTX-213ENST00000465003 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
APTX-213ENST00000465003 ROMO1P60602 79 aa5.78□□□□□ -1.48
APTX-213ENST00000465003 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
APTX-213ENST00000465003 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
APTX-213ENST00000465003 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
APTX-213ENST00000465003 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
APTX-213ENST00000465003 UQCR11O14957 56 aa5.72□□□□□ -1.49
APTX-213ENST00000465003 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
APTX-213ENST00000465003 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
APTX-213ENST00000465003 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
APTX-213ENST00000465003 MT2AP02795 61 aa5.7□□□□□ -1.5
APTX-213ENST00000465003 MT1FP04733 61 aa5.69□□□□□ -1.5
APTX-213ENST00000465003 A0A1B0GU69 56 aa5.68□□□□□ -1.5
APTX-213ENST00000465003 ACYP2P14621 99 aa5.67□□□□□ -1.5
APTX-213ENST00000465003 S4R3F8 94 aa5.67□□□□□ -1.5
APTX-213ENST00000465003 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
APTX-213ENST00000465003 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
APTX-213ENST00000465003 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
APTX-213ENST00000465003 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
APTX-213ENST00000465003 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
APTX-213ENST00000465003 USH2AO75445 5202 aa5.56□□□□□ -1.52
APTX-213ENST00000465003 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
APTX-213ENST00000465003 P0C880 135 aa5.53□□□□□ -1.52
APTX-213ENST00000465003 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
APTX-213ENST00000465003 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
APTX-213ENST00000465003 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
APTX-213ENST00000465003 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
APTX-213ENST00000465003 H0YAA0 97 aa5.33□□□□□ -1.56
APTX-213ENST00000465003 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
APTX-213ENST00000465003 K7ERS5 55 aa5.31□□□□□ -1.56
APTX-213ENST00000465003 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
APTX-213ENST00000465003 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
APTX-213ENST00000465003 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
APTX-213ENST00000465003 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
APTX-213ENST00000465003 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
APTX-213ENST00000465003 MT1BP07438 61 aa5.26□□□□□ -1.57
APTX-213ENST00000465003 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
APTX-213ENST00000465003 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
APTX-213ENST00000465003 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
APTX-213ENST00000465003 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
APTX-213ENST00000465003 R4GN34 69 aa5.21□□□□□ -1.58
APTX-213ENST00000465003 M0QZ58 72 aa5.2□□□□□ -1.58
APTX-213ENST00000465003 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
APTX-213ENST00000465003 A0A1B0GU33 70 aa5.2□□□□□ -1.58
APTX-213ENST00000465003 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
APTX-213ENST00000465003 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
APTX-213ENST00000465003 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
APTX-213ENST00000465003 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
APTX-213ENST00000465003 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
APTX-213ENST00000465003 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
APTX-213ENST00000465003 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
APTX-213ENST00000465003 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
APTX-213ENST00000465003 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
APTX-213ENST00000465003 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
APTX-213ENST00000465003 MT1XP80297 61 aa5□□□□□ -1.61
APTX-213ENST00000465003 A0A0D9SG42 100 aa4.97□□□□□ -1.61
APTX-213ENST00000465003 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
APTX-213ENST00000465003 KMT2DO14686 5537 aa4.94□□□□□ -1.62
APTX-213ENST00000465003 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
APTX-213ENST00000465003 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms