RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 K7EQZ3 153 aa3.76□□□□□ -1.81
APP-213ENST00000464867 K7ERU9 68 aa3.76□□□□□ -1.81
APP-213ENST00000464867 PDE6GP18545 87 aa3.76□□□□□ -1.81
APP-213ENST00000464867 DNAL4O96015 105 aa3.75□□□□□ -1.81
APP-213ENST00000464867 TMEM254Q8TBM7 123 aa3.75□□□□□ -1.81
APP-213ENST00000464867 ORMDL1Q9P0S3 153 aa3.75□□□□□ -1.81
APP-213ENST00000464867 A8MUN3 132 aa3.74□□□□□ -1.81
APP-213ENST00000464867 TMEM256-PLSCR3K7ERE1 68 aa3.74□□□□□ -1.81
APP-213ENST00000464867 S100A2P29034 98 aa3.74□□□□□ -1.81
APP-213ENST00000464867 KRTDAPP60985 99 aa3.74□□□□□ -1.81
APP-213ENST00000464867 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
APP-213ENST00000464867 ATOH7Q8N100 152 aa3.73□□□□□ -1.81
APP-213ENST00000464867 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
APP-213ENST00000464867 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
APP-213ENST00000464867 COL5A1-AS1Q5SY13 56 aa3.7□□□□□ -1.82
APP-213ENST00000464867 Q6ZQT0 140 aa3.7□□□□□ -1.82
APP-213ENST00000464867 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
APP-213ENST00000464867 Q5W150 140 aa3.69□□□□□ -1.82
APP-213ENST00000464867 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
APP-213ENST00000464867 SEC61GP60059 68 aa3.67□□□□□ -1.82
APP-213ENST00000464867 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
APP-213ENST00000464867 C9JAW5 83 aa3.65□□□□□ -1.83
APP-213ENST00000464867 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
APP-213ENST00000464867 CEND1Q8N111 149 aa3.62□□□□□ -1.83
APP-213ENST00000464867 A0A1B0GW54 56 aa3.6□□□□□ -1.83
APP-213ENST00000464867 J3QR89 54 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
APP-213ENST00000464867 PRO1854Q9UHT4 67 aa3.6□□□□□ -1.83
APP-213ENST00000464867 H0YAA0 97 aa3.59□□□□□ -1.83
APP-213ENST00000464867 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
APP-213ENST00000464867 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
APP-213ENST00000464867 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
APP-213ENST00000464867 HIST3H2BBQ8N257 126 aa3.58□□□□□ -1.84
APP-213ENST00000464867 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
APP-213ENST00000464867 NREPQ16612 68 aa3.57□□□□□ -1.84
APP-213ENST00000464867 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
APP-213ENST00000464867 COX6CP09669 75 aa3.56□□□□□ -1.84
APP-213ENST00000464867 PSMB2P49721 201 aa3.56□□□□□ -1.84
APP-213ENST00000464867 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
APP-213ENST00000464867 R4GN34 69 aa3.56□□□□□ -1.84
APP-213ENST00000464867 GTF2H5Q6ZYL4 71 aa3.55□□□□□ -1.84
APP-213ENST00000464867 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
APP-213ENST00000464867 V9GYY9 64 aa3.55□□□□□ -1.84
APP-213ENST00000464867 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
APP-213ENST00000464867 A8MU10 97 aa3.53□□□□□ -1.84
APP-213ENST00000464867 NDUFC1O43677 76 aa3.53□□□□□ -1.84
APP-213ENST00000464867 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
APP-213ENST00000464867 HSD52Q0P140 79 aa3.52□□□□□ -1.85
APP-213ENST00000464867 CASC2Q6XLA1 102 aa3.52□□□□□ -1.85
APP-213ENST00000464867 UQCR10Q9UDW1 63 aa3.52□□□□□ -1.85
APP-213ENST00000464867 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
APP-213ENST00000464867 A0A087WVE0 104 aa3.49□□□□□ -1.85
APP-213ENST00000464867 COX8AP10176 69 aa3.49□□□□□ -1.85
APP-213ENST00000464867 LINC01554Q52M75 96 aa3.49□□□□□ -1.85
APP-213ENST00000464867 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
APP-213ENST00000464867 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
APP-213ENST00000464867 M0QZ58 72 aa3.48□□□□□ -1.85
APP-213ENST00000464867 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
APP-213ENST00000464867 ANAPC13Q9BS18 74 aa3.48□□□□□ -1.85
APP-213ENST00000464867 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
APP-213ENST00000464867 LOC110117498A0A087WWA1 95 aa3.47□□□□□ -1.85
APP-213ENST00000464867 MT1EP04732 61 aa3.47□□□□□ -1.85
APP-213ENST00000464867 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
APP-213ENST00000464867 MT1GP13640 62 aa3.46□□□□□ -1.86
APP-213ENST00000464867 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
APP-213ENST00000464867 HIGD1BQ9P298 99 aa3.46□□□□□ -1.86
APP-213ENST00000464867 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
APP-213ENST00000464867 BPY2O14599 106 aa3.44□□□□□ -1.86
APP-213ENST00000464867 BATFQ16520 125 aa3.44□□□□□ -1.86
APP-213ENST00000464867 F8W1H4 67 aa3.43□□□□□ -1.86
APP-213ENST00000464867 SCGB1C2P0DMR2 95 aa3.43□□□□□ -1.86
APP-213ENST00000464867 NAA38Q9BRA0 125 aaKnown RBP3.43□□□□□ -1.86
APP-213ENST00000464867 K7EP34 96 aa3.42□□□□□ -1.86
APP-213ENST00000464867 TAX1BP3O14907 124 aa3.42□□□□□ -1.86
APP-213ENST00000464867 FXYD2P54710 66 aa3.4□□□□□ -1.87
APP-213ENST00000464867 C14orf132Q9NPU4 83 aa3.4□□□□□ -1.87
APP-213ENST00000464867 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
APP-213ENST00000464867 SPATA45Q537H7 98 aa3.38□□□□□ -1.87
APP-213ENST00000464867 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
APP-213ENST00000464867 Q8N9L7 120 aa3.38□□□□□ -1.87
APP-213ENST00000464867 K7ERJ3 54 aa3.37□□□□□ -1.87
APP-213ENST00000464867 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
APP-213ENST00000464867 P0C880 135 aa3.36□□□□□ -1.87
APP-213ENST00000464867 MT1MQ8N339 61 aa3.35□□□□□ -1.87
APP-213ENST00000464867 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
APP-213ENST00000464867 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
APP-213ENST00000464867 TMEM258P61165 79 aa3.34□□□□□ -1.87
APP-213ENST00000464867 A0A1W2PPM0 123 aa3.33□□□□□ -1.88
APP-213ENST00000464867 UQCRQO14949 82 aa3.33□□□□□ -1.88
APP-213ENST00000464867 MT-ATP8P03928 68 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms