RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
MCF2L-220ENST00000464800 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
MCF2L-220ENST00000464800 ATP5EP2Q5VTU8 51 aa6.44□□□□□ -1.38
MCF2L-220ENST00000464800 IMUPQ9GZP8 106 aa6.43□□□□□ -1.38
MCF2L-220ENST00000464800 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
MCF2L-220ENST00000464800 LINC00643Q86TS7 51 aa6.42□□□□□ -1.38
MCF2L-220ENST00000464800 LCA10Q71F78 164 aa6.4□□□□□ -1.38
MCF2L-220ENST00000464800 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
MCF2L-220ENST00000464800 MDN1Q9NU22 5596 aa6.4□□□□□ -1.39
MCF2L-220ENST00000464800 SPRR2EP22531 72 aa6.35□□□□□ -1.39
MCF2L-220ENST00000464800 SPRR2BP35325 72 aa6.35□□□□□ -1.39
MCF2L-220ENST00000464800 SPRR2AP35326 72 aa6.35□□□□□ -1.39
MCF2L-220ENST00000464800 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
MCF2L-220ENST00000464800 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
MCF2L-220ENST00000464800 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
MCF2L-220ENST00000464800 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
MCF2L-220ENST00000464800 A0A087WVE0 104 aa6.28□□□□□ -1.4
MCF2L-220ENST00000464800 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
MCF2L-220ENST00000464800 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
MCF2L-220ENST00000464800 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
MCF2L-220ENST00000464800 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
MCF2L-220ENST00000464800 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
MCF2L-220ENST00000464800 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
MCF2L-220ENST00000464800 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
MCF2L-220ENST00000464800 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
MCF2L-220ENST00000464800 SCGB1A1P11684 91 aa6.16□□□□□ -1.42
MCF2L-220ENST00000464800 SPRR2DP22532 72 aa6.15□□□□□ -1.42
MCF2L-220ENST00000464800 MT1XP80297 61 aa6.14□□□□□ -1.43
MCF2L-220ENST00000464800 UQCRQO14949 82 aa6.13□□□□□ -1.43
MCF2L-220ENST00000464800 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
MCF2L-220ENST00000464800 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
MCF2L-220ENST00000464800 NDUFC1O43677 76 aa6.1□□□□□ -1.43
MCF2L-220ENST00000464800 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
MCF2L-220ENST00000464800 A8MUN3 132 aa6.09□□□□□ -1.43
MCF2L-220ENST00000464800 H0YAA0 97 aa6.09□□□□□ -1.43
MCF2L-220ENST00000464800 H0Y9P7 68 aa6.08□□□□□ -1.44
MCF2L-220ENST00000464800 SMIM20Q8N5G0 67 aa6.08□□□□□ -1.44
MCF2L-220ENST00000464800 ATOX1O00244 68 aa6.07□□□□□ -1.44
MCF2L-220ENST00000464800 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
MCF2L-220ENST00000464800 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
MCF2L-220ENST00000464800 MP68P56378 58 aa6.05□□□□□ -1.44
MCF2L-220ENST00000464800 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
MCF2L-220ENST00000464800 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
MCF2L-220ENST00000464800 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
MCF2L-220ENST00000464800 H3BPC8 53 aa6□□□□□ -1.45
MCF2L-220ENST00000464800 LCE3BQ5TA77 95 aa6□□□□□ -1.45
MCF2L-220ENST00000464800 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
MCF2L-220ENST00000464800 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
MCF2L-220ENST00000464800 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
MCF2L-220ENST00000464800 ANAPC13Q9BS18 74 aa5.91□□□□□ -1.46
MCF2L-220ENST00000464800 R4GN34 69 aa5.91□□□□□ -1.46
MCF2L-220ENST00000464800 COX7CP15954 63 aa5.9□□□□□ -1.46
MCF2L-220ENST00000464800 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
MCF2L-220ENST00000464800 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
MCF2L-220ENST00000464800 P0C880 135 aa5.87□□□□□ -1.47
MCF2L-220ENST00000464800 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
MCF2L-220ENST00000464800 M0QZ58 72 aa5.84□□□□□ -1.47
MCF2L-220ENST00000464800 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
MCF2L-220ENST00000464800 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
MCF2L-220ENST00000464800 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
MCF2L-220ENST00000464800 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
MCF2L-220ENST00000464800 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
MCF2L-220ENST00000464800 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
MCF2L-220ENST00000464800 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
MCF2L-220ENST00000464800 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
MCF2L-220ENST00000464800 H7BZZ5 65 aa5.71□□□□□ -1.5
MCF2L-220ENST00000464800 ACYP2P14621 99 aa5.7□□□□□ -1.5
MCF2L-220ENST00000464800 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
MCF2L-220ENST00000464800 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.5
MCF2L-220ENST00000464800 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
MCF2L-220ENST00000464800 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
MCF2L-220ENST00000464800 TMEM258P61165 79 aa5.59□□□□□ -1.51
MCF2L-220ENST00000464800 PCP4P48539 62 aa5.58□□□□□ -1.52
MCF2L-220ENST00000464800 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
MCF2L-220ENST00000464800 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
MCF2L-220ENST00000464800 COA5Q86WW8 74 aa5.57□□□□□ -1.52
MCF2L-220ENST00000464800 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
MCF2L-220ENST00000464800 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
MCF2L-220ENST00000464800 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
MCF2L-220ENST00000464800 MT1EP04732 61 aa5.47□□□□□ -1.53
MCF2L-220ENST00000464800 MT4P47944 62 aa5.4□□□□□ -1.54
MCF2L-220ENST00000464800 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
MCF2L-220ENST00000464800 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
MCF2L-220ENST00000464800 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
MCF2L-220ENST00000464800 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
MCF2L-220ENST00000464800 SEC61GP60059 68 aa5.36□□□□□ -1.55
MCF2L-220ENST00000464800 MT1GP13640 62 aa5.32□□□□□ -1.56
MCF2L-220ENST00000464800 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
MCF2L-220ENST00000464800 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
MCF2L-220ENST00000464800 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
MCF2L-220ENST00000464800 A0A1B0GU69 56 aa5.29□□□□□ -1.56
MCF2L-220ENST00000464800 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
MCF2L-220ENST00000464800 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
MCF2L-220ENST00000464800 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
MCF2L-220ENST00000464800 A0A0D9SG42 100 aa5.23□□□□□ -1.57
MCF2L-220ENST00000464800 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
MCF2L-220ENST00000464800 MT1MQ8N339 61 aa5.23□□□□□ -1.57
MCF2L-220ENST00000464800 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
MCF2L-220ENST00000464800 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
MCF2L-220ENST00000464800 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms