RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 KLK9Q2XQG4 91 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 DEFB104AQ8WTQ1 72 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 KANTRA0A1W2PQU2 76 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 MT2AP02795 61 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 MT1FP04733 61 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 IFI6P09912 130 aa0.55□□□□□ -2.32
SMC4-203ENST00000462668 RPL38P63173 70 aaKnown RBP0.55□□□□□ -2.32
SMC4-203ENST00000462668 LEPROTL1O95214 131 aa0.55□□□□□ -2.32
SMC4-203ENST00000462668 PLGLAQ15195 96 aa0.55□□□□□ -2.32
SMC4-203ENST00000462668 PIGYQ3MUY2 71 aa0.55□□□□□ -2.32
SMC4-203ENST00000462668 COX8AP10176 69 aa0.54□□□□□ -2.32
SMC4-203ENST00000462668 HAMPP81172 84 aa0.54□□□□□ -2.32
SMC4-203ENST00000462668 DEFB107AQ8IZN7 70 aa0.54□□□□□ -2.32
SMC4-203ENST00000462668 D6R8Y8 96 aa0.53□□□□□ -2.32
SMC4-203ENST00000462668 MUSTN1Q8IVN3 82 aa0.53□□□□□ -2.32
SMC4-203ENST00000462668 K7EQZ3 153 aa0.53□□□□□ -2.32
SMC4-203ENST00000462668 USMG5Q96IX5 58 aa0.52□□□□□ -2.33
SMC4-203ENST00000462668 ADIRFQ15847 76 aa0.51□□□□□ -2.33
SMC4-203ENST00000462668 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
SMC4-203ENST00000462668 A0A1B0GU69 56 aa0.51□□□□□ -2.33
SMC4-203ENST00000462668 CEBPZOSA8MTT3 80 aa0.51□□□□□ -2.33
SMC4-203ENST00000462668 Q5BKY6 102 aa0.51□□□□□ -2.33
SMC4-203ENST00000462668 A0A1B0GUT8 65 aa0.5□□□□□ -2.33
SMC4-203ENST00000462668 KAAG1Q9UBP8 84 aa0.5□□□□□ -2.33
SMC4-203ENST00000462668 H3BUT2 72 aa0.49□□□□□ -2.33
SMC4-203ENST00000462668 DEFB110Q30KQ9 67 aa0.49□□□□□ -2.33
SMC4-203ENST00000462668 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
SMC4-203ENST00000462668 Q8IZM0 81 aa0.49□□□□□ -2.33
SMC4-203ENST00000462668 MT1BP07438 61 aa0.49□□□□□ -2.33
SMC4-203ENST00000462668 SPRR2EP22531 72 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 SPRR2BP35325 72 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 SPRR2AP35326 72 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 DEFB106AQ8N104 65 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 SPRR2DP22532 72 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 ATP5EP2Q5VTU8 51 aa0.48□□□□□ -2.33
SMC4-203ENST00000462668 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
SMC4-203ENST00000462668 KRTAP19-8Q3LI54 63 aa0.47□□□□□ -2.33
SMC4-203ENST00000462668 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
SMC4-203ENST00000462668 TRAV21A0A0B4J279 112 aa0.46□□□□□ -2.34
SMC4-203ENST00000462668 NCBP2-AS2Q69YL0 99 aa0.46□□□□□ -2.34
SMC4-203ENST00000462668 PRO0255Q9UI72 69 aa0.45□□□□□ -2.34
SMC4-203ENST00000462668 CCL22O00626 93 aa0.45□□□□□ -2.34
SMC4-203ENST00000462668 SPRR1AP35321 89 aa0.45□□□□□ -2.34
SMC4-203ENST00000462668 GNGT1P63211 74 aa0.45□□□□□ -2.34
SMC4-203ENST00000462668 A8MTW9 85 aa0.44□□□□□ -2.34
SMC4-203ENST00000462668 M0R1W7 72 aa0.44□□□□□ -2.34
SMC4-203ENST00000462668 HEPN1Q6WQI6 88 aa0.43□□□□□ -2.34
SMC4-203ENST00000462668 COX7BP24311 80 aa0.43□□□□□ -2.34
SMC4-203ENST00000462668 ABRACLQ9P1F3 81 aa0.43□□□□□ -2.34
SMC4-203ENST00000462668 I3L3M4 83 aa0.43□□□□□ -2.34
SMC4-203ENST00000462668 SMR3BP02814 79 aaPredicted RBP0.43□□□□□ -2.34
SMC4-203ENST00000462668 SMCO4Q9NRQ5 59 aa0.43□□□□□ -2.34
SMC4-203ENST00000462668 CPSF4LA6NMK7 179 aaKnown RBP0.42□□□□□ -2.34
SMC4-203ENST00000462668 PDCD5O14737 125 aa0.42□□□□□ -2.34
SMC4-203ENST00000462668 SMIM13P0DJ93 91 aa0.42□□□□□ -2.34
SMC4-203ENST00000462668 TIMM8BQ9Y5J9 83 aaPredicted RBP0.42□□□□□ -2.34
SMC4-203ENST00000462668 SMIM31A0A1B0GVY4 71 aa0.41□□□□□ -2.34
SMC4-203ENST00000462668 H3BUX3 64 aa0.41□□□□□ -2.34
SMC4-203ENST00000462668 S100ZQ8WXG8 99 aa0.41□□□□□ -2.34
SMC4-203ENST00000462668 NDUFB1O75438 58 aa0.41□□□□□ -2.34
SMC4-203ENST00000462668 TNCP24821 2201 aa0.4□□□□□ -2.34
SMC4-203ENST00000462668 H3BNG1 76 aa0.4□□□□□ -2.34
SMC4-203ENST00000462668 IFI27P40305 119 aaPredicted RBP0.4□□□□□ -2.34
SMC4-203ENST00000462668 LINC01549A6NIU2 74 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 CRIPTQ9P021 101 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 A0A087WXM4 84 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 UMAD1C9J7I0 102 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 SPRR1BP22528 89 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 GAFA1Q96PS6 74 aa0.4□□□□□ -2.35
SMC4-203ENST00000462668 MRPL34Q9BQ48 92 aaKnown RBP0.39□□□□□ -2.35
SMC4-203ENST00000462668 MRPL33O75394 65 aaKnown RBP0.39□□□□□ -2.35
SMC4-203ENST00000462668 SERF2P84101 59 aa0.39□□□□□ -2.35
SMC4-203ENST00000462668 NDUFA3O95167 84 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 MINOS1Q5TGZ0 78 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 SNRPGP62308 76 aaKnown RBP0.38□□□□□ -2.35
SMC4-203ENST00000462668 DEFA5Q01523 94 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 DEFB114Q30KQ6 69 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 H3BUA1 57 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 DEFB136Q30KP8 78 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 COX6B2Q6YFQ2 88 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
SMC4-203ENST00000462668 SNRPGP15A8MWD9 76 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 KRTAP19-7Q3SYF9 63 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 TOMM5Q8N4H5 51 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 TMEM167BQ9NRX6 74 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 MT4P47944 62 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 MT1XP80297 61 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 DEFB135Q30KP9 77 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 K7EMI3 77 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 CMC2Q9NRP2 79 aa0.37□□□□□ -2.35
SMC4-203ENST00000462668 A0A087WWC5 75 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 M0R2T5 61 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 H1FX-AS1Q4G0G2 97 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 NMES1Q9C002 83 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 NDUFA4O00483 81 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 PRCDQ00LT1 54 aa0.36□□□□□ -2.35
SMC4-203ENST00000462668 FCER1GP30273 86 aa0.35□□□□□ -2.35
SMC4-203ENST00000462668 NREPQ16612 68 aa0.35□□□□□ -2.35
SMC4-203ENST00000462668 CDKN2A-AS1Q9UH64 79 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms