RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MT2AP02795 61 aa4.33□□□□□ -1.72
DDX39B-216ENST00000462421 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
DDX39B-216ENST00000462421 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
DDX39B-216ENST00000462421 UQCRQO14949 82 aa4.31□□□□□ -1.72
DDX39B-216ENST00000462421 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
DDX39B-216ENST00000462421 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
DDX39B-216ENST00000462421 MT1FP04733 61 aa4.29□□□□□ -1.72
DDX39B-216ENST00000462421 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
DDX39B-216ENST00000462421 MP68P56378 58 aa4.28□□□□□ -1.72
DDX39B-216ENST00000462421 H0Y9P7 68 aa4.27□□□□□ -1.73
DDX39B-216ENST00000462421 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
DDX39B-216ENST00000462421 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
DDX39B-216ENST00000462421 A0A1B0GV90 55 aa4.24□□□□□ -1.73
DDX39B-216ENST00000462421 A0A087WVE0 104 aa4.21□□□□□ -1.74
DDX39B-216ENST00000462421 NDUFC1O43677 76 aa4.21□□□□□ -1.74
DDX39B-216ENST00000462421 LCA10Q71F78 164 aa4.21□□□□□ -1.74
DDX39B-216ENST00000462421 A8MUN3 132 aa4.2□□□□□ -1.74
DDX39B-216ENST00000462421 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
DDX39B-216ENST00000462421 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
DDX39B-216ENST00000462421 H3BPC8 53 aa4.17□□□□□ -1.74
DDX39B-216ENST00000462421 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
DDX39B-216ENST00000462421 K7ERU9 68 aa4.15□□□□□ -1.75
DDX39B-216ENST00000462421 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
DDX39B-216ENST00000462421 SMIM20Q8N5G0 67 aa4.13□□□□□ -1.75
DDX39B-216ENST00000462421 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
DDX39B-216ENST00000462421 USH2AO75445 5202 aa4.13□□□□□ -1.75
DDX39B-216ENST00000462421 KLKP1Q107X0 134 aa4.12□□□□□ -1.75
DDX39B-216ENST00000462421 Q5VV11 94 aa4.12□□□□□ -1.75
DDX39B-216ENST00000462421 C20orf197Q8N268 126 aa4.12□□□□□ -1.75
DDX39B-216ENST00000462421 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
DDX39B-216ENST00000462421 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
DDX39B-216ENST00000462421 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
DDX39B-216ENST00000462421 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
DDX39B-216ENST00000462421 A6NN06 94 aa4.05□□□□□ -1.76
DDX39B-216ENST00000462421 H0YAA0 97 aa4.05□□□□□ -1.76
DDX39B-216ENST00000462421 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
DDX39B-216ENST00000462421 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
DDX39B-216ENST00000462421 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
DDX39B-216ENST00000462421 ACYP2P14621 99 aa4.03□□□□□ -1.76
DDX39B-216ENST00000462421 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
DDX39B-216ENST00000462421 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
DDX39B-216ENST00000462421 R4GN34 69 aa4.02□□□□□ -1.77
DDX39B-216ENST00000462421 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
DDX39B-216ENST00000462421 MT-ATP8P03928 68 aa4□□□□□ -1.77
DDX39B-216ENST00000462421 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
DDX39B-216ENST00000462421 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
DDX39B-216ENST00000462421 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
DDX39B-216ENST00000462421 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
DDX39B-216ENST00000462421 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
DDX39B-216ENST00000462421 M0QZ58 72 aa3.95□□□□□ -1.78
DDX39B-216ENST00000462421 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
DDX39B-216ENST00000462421 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
DDX39B-216ENST00000462421 MT1BP07438 61 aa3.92□□□□□ -1.78
DDX39B-216ENST00000462421 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
DDX39B-216ENST00000462421 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
DDX39B-216ENST00000462421 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
DDX39B-216ENST00000462421 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
DDX39B-216ENST00000462421 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
DDX39B-216ENST00000462421 SEC61GP60059 68 aa3.88□□□□□ -1.79
DDX39B-216ENST00000462421 SPANXA2-OT1Q8N9U9 137 aa3.88□□□□□ -1.79
DDX39B-216ENST00000462421 NEBP20929 6669 aa3.87□□□□□ -1.79
DDX39B-216ENST00000462421 P0C880 135 aa3.85□□□□□ -1.79
DDX39B-216ENST00000462421 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
DDX39B-216ENST00000462421 COX7CP15954 63 aa3.79□□□□□ -1.8
DDX39B-216ENST00000462421 COA5Q86WW8 74 aa3.78□□□□□ -1.8
DDX39B-216ENST00000462421 ANAPC13Q9BS18 74 aa3.76□□□□□ -1.81
DDX39B-216ENST00000462421 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
DDX39B-216ENST00000462421 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
DDX39B-216ENST00000462421 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
DDX39B-216ENST00000462421 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
DDX39B-216ENST00000462421 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
DDX39B-216ENST00000462421 MT1XP80297 61 aa3.7□□□□□ -1.82
DDX39B-216ENST00000462421 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
DDX39B-216ENST00000462421 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
DDX39B-216ENST00000462421 A0A1B0GU69 56 aa3.67□□□□□ -1.82
DDX39B-216ENST00000462421 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
DDX39B-216ENST00000462421 A0A1B0GU33 70 aa3.66□□□□□ -1.82
DDX39B-216ENST00000462421 H7BZZ5 65 aa3.66□□□□□ -1.82
DDX39B-216ENST00000462421 ATP5EP56381 51 aaPredicted RBP3.66□□□□□ -1.82
DDX39B-216ENST00000462421 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
DDX39B-216ENST00000462421 A0A0D9SG42 100 aa3.65□□□□□ -1.83
DDX39B-216ENST00000462421 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
DDX39B-216ENST00000462421 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
DDX39B-216ENST00000462421 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
DDX39B-216ENST00000462421 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 SPRR2EP22531 72 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 SPRR2BP35325 72 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 SPRR2AP35326 72 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
DDX39B-216ENST00000462421 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 KMT2DO14686 5537 aa3.63□□□□□ -1.83
DDX39B-216ENST00000462421 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
DDX39B-216ENST00000462421 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
DDX39B-216ENST00000462421 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
DDX39B-216ENST00000462421 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
DDX39B-216ENST00000462421 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
DDX39B-216ENST00000462421 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
DDX39B-216ENST00000462421 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
DDX39B-216ENST00000462421 TMEM258P61165 79 aa3.53□□□□□ -1.84
DDX39B-216ENST00000462421 SPRR2DP22532 72 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms