RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
BRCA1-207ENST00000461798 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
BRCA1-207ENST00000461798 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
BRCA1-207ENST00000461798 S4R3F8 94 aa4.16□□□□□ -1.74
BRCA1-207ENST00000461798 F8W1H4 67 aa4.15□□□□□ -1.75
BRCA1-207ENST00000461798 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
BRCA1-207ENST00000461798 GTF2H5Q6ZYL4 71 aa4.14□□□□□ -1.75
BRCA1-207ENST00000461798 LCA10Q71F78 164 aa4.14□□□□□ -1.75
BRCA1-207ENST00000461798 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
BRCA1-207ENST00000461798 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
BRCA1-207ENST00000461798 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
BRCA1-207ENST00000461798 MT1BP07438 61 aa4.13□□□□□ -1.75
BRCA1-207ENST00000461798 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
BRCA1-207ENST00000461798 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
BRCA1-207ENST00000461798 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
BRCA1-207ENST00000461798 Q5VV11 94 aa4.1□□□□□ -1.75
BRCA1-207ENST00000461798 KLKP1Q107X0 134 aa4.09□□□□□ -1.75
BRCA1-207ENST00000461798 A6NN06 94 aa4.08□□□□□ -1.76
BRCA1-207ENST00000461798 LOC101927531A0A1B0GV80 90 aa4.07□□□□□ -1.76
BRCA1-207ENST00000461798 ACYP1P07311 99 aa4.07□□□□□ -1.76
BRCA1-207ENST00000461798 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
BRCA1-207ENST00000461798 CRIPTQ9P021 101 aa4.06□□□□□ -1.76
BRCA1-207ENST00000461798 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
BRCA1-207ENST00000461798 A0A087WVE0 104 aa4.04□□□□□ -1.76
BRCA1-207ENST00000461798 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
BRCA1-207ENST00000461798 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
BRCA1-207ENST00000461798 UQCRQO14949 82 aa4.03□□□□□ -1.76
BRCA1-207ENST00000461798 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
BRCA1-207ENST00000461798 PCP4L1A6NKN8 68 aa4.02□□□□□ -1.77
BRCA1-207ENST00000461798 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
BRCA1-207ENST00000461798 NEBP20929 6669 aa4.02□□□□□ -1.77
BRCA1-207ENST00000461798 H0YAA0 97 aa4.01□□□□□ -1.77
BRCA1-207ENST00000461798 ATOX1O00244 68 aa4.01□□□□□ -1.77
BRCA1-207ENST00000461798 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
BRCA1-207ENST00000461798 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
BRCA1-207ENST00000461798 A8MUN3 132 aa3.98□□□□□ -1.77
BRCA1-207ENST00000461798 H0Y9P7 68 aa3.98□□□□□ -1.77
BRCA1-207ENST00000461798 NDUFC1O43677 76 aa3.98□□□□□ -1.77
BRCA1-207ENST00000461798 HIST1H4AP62805 103 aaKnown RBP3.98□□□□□ -1.77
BRCA1-207ENST00000461798 LINC00643Q86TS7 51 aa3.96□□□□□ -1.78
BRCA1-207ENST00000461798 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
BRCA1-207ENST00000461798 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
BRCA1-207ENST00000461798 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
BRCA1-207ENST00000461798 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
BRCA1-207ENST00000461798 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
BRCA1-207ENST00000461798 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
BRCA1-207ENST00000461798 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
BRCA1-207ENST00000461798 MP68P56378 58 aa3.9□□□□□ -1.79
BRCA1-207ENST00000461798 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
BRCA1-207ENST00000461798 KMT2DO14686 5537 aa3.87□□□□□ -1.79
BRCA1-207ENST00000461798 H3BPC8 53 aa3.86□□□□□ -1.79
BRCA1-207ENST00000461798 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
BRCA1-207ENST00000461798 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
BRCA1-207ENST00000461798 MT1XP80297 61 aa3.85□□□□□ -1.79
BRCA1-207ENST00000461798 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
BRCA1-207ENST00000461798 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
BRCA1-207ENST00000461798 P0C880 135 aa3.82□□□□□ -1.8
BRCA1-207ENST00000461798 C20orf197Q8N268 126 aa3.82□□□□□ -1.8
BRCA1-207ENST00000461798 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
BRCA1-207ENST00000461798 A0A1B0GV90 55 aa3.81□□□□□ -1.8
BRCA1-207ENST00000461798 R4GN34 69 aa3.81□□□□□ -1.8
BRCA1-207ENST00000461798 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
BRCA1-207ENST00000461798 J3QR89 54 aa3.79□□□□□ -1.8
BRCA1-207ENST00000461798 M0QZ58 72 aa3.77□□□□□ -1.81
BRCA1-207ENST00000461798 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
BRCA1-207ENST00000461798 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
BRCA1-207ENST00000461798 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
BRCA1-207ENST00000461798 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
BRCA1-207ENST00000461798 TRAV7A0A075B6U4 112 aa3.76□□□□□ -1.81
BRCA1-207ENST00000461798 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
BRCA1-207ENST00000461798 SPRR2EP22531 72 aa3.73□□□□□ -1.81
BRCA1-207ENST00000461798 SPRR2BP35325 72 aa3.73□□□□□ -1.81
BRCA1-207ENST00000461798 SPRR2AP35326 72 aa3.73□□□□□ -1.81
BRCA1-207ENST00000461798 ACYP2P14621 99 aa3.72□□□□□ -1.81
BRCA1-207ENST00000461798 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
BRCA1-207ENST00000461798 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
BRCA1-207ENST00000461798 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
BRCA1-207ENST00000461798 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
BRCA1-207ENST00000461798 MT-ATP8P03928 68 aa3.65□□□□□ -1.83
BRCA1-207ENST00000461798 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
BRCA1-207ENST00000461798 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
BRCA1-207ENST00000461798 K7ERU9 68 aa3.61□□□□□ -1.83
BRCA1-207ENST00000461798 SPRR2DP22532 72 aa3.61□□□□□ -1.83
BRCA1-207ENST00000461798 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
BRCA1-207ENST00000461798 SNURFQ9Y675 71 aa3.58□□□□□ -1.84
BRCA1-207ENST00000461798 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
BRCA1-207ENST00000461798 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
BRCA1-207ENST00000461798 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
BRCA1-207ENST00000461798 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
BRCA1-207ENST00000461798 COA5Q86WW8 74 aa3.46□□□□□ -1.86
BRCA1-207ENST00000461798 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
BRCA1-207ENST00000461798 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
BRCA1-207ENST00000461798 SEC61GP60059 68 aa3.43□□□□□ -1.86
BRCA1-207ENST00000461798 SERP1Q9Y6X1 66 aa3.43□□□□□ -1.86
BRCA1-207ENST00000461798 MT1EP04732 61 aa3.42□□□□□ -1.86
BRCA1-207ENST00000461798 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
BRCA1-207ENST00000461798 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
BRCA1-207ENST00000461798 A0A0D9SG42 100 aa3.39□□□□□ -1.87
BRCA1-207ENST00000461798 A0A1B0GU33 70 aa3.39□□□□□ -1.87
BRCA1-207ENST00000461798 COX7CP15954 63 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms