RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 IGLC1P0CG04 106 aa-1.31□□□□□ -2.62
SCARNA18-201ENST00000459004 WHAMMP3Q1A5X7 153 aa-1.31□□□□□ -2.62
SCARNA18-201ENST00000459004 C20orf78Q9BR46 151 aa-1.31□□□□□ -2.62
SCARNA18-201ENST00000459004 Q9Y3F1 56 aa-1.31□□□□□ -2.62
SCARNA18-201ENST00000459004 PPLO60437 1756 aa-1.31□□□□□ -2.62
SCARNA18-201ENST00000459004 CEP162Q5TB80 1403 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 ABCA6Q8N139 1617 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 H3BUT2 72 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 ATOX1O00244 68 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 NDUFA1O15239 70 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 NXT2Q9NPJ8 142 aaKnown RBP-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 ABRACLQ9P1F3 81 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 PRXQ9BXM0 1461 aa-1.32□□□□□ -2.62
SCARNA18-201ENST00000459004 CLTCL1P53675 1640 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 MROH2BQ7Z745 1585 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 CPS1P31327 1500 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 TMEM218A2RU14 115 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 CRYM-AS1A6NIL9 109 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 MIF4GDA9UHW6 222 aaKnown RBP-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 MRPL33O75394 65 aaKnown RBP-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 GYPAP02724 150 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 IFI27P40305 119 aaPredicted RBP-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 ACBD7Q8N6N7 88 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 C1orf54Q8WWF1 131 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 AP4S1Q9Y587 144 aa-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 CLTCQ00610 1675 aaKnown RBP-1.33□□□□□ -2.62
SCARNA18-201ENST00000459004 TCHHQ07283 1943 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 H3BQF6 201 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 IGLC2P0DOY2 106 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 IGLC3P0DOY3 106 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 PKIAP61925 76 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 SARNPP82979 210 aaKnown RBP-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 Q56UQ5 140 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 MEIG1Q5JSS6 88 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 C8orf59Q8N0T1 100 aaPredicted RBP-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 TOMM7Q9P0U1 55 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 ARL2-SNX15V9GYD0 113 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 NAIPQ13075 1403 aa-1.34□□□□□ -2.62
SCARNA18-201ENST00000459004 UGGT2Q9NYU1 1516 aa-1.35□□□□□ -2.62
SCARNA18-201ENST00000459004 FAM25AB3EWG3 89 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 FAM25CB3EWG5 89 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 FAM25GB3EWG6 89 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 GNGT1P63211 74 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 HSD52Q0P140 79 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 RPL13AP3Q6NVV1 102 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 DEFB107AQ8IZN7 70 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 ARL11Q969Q4 196 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 GAFA1Q96PS6 74 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 LINC00470Q9BZP3 86 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 UQCR10Q9UDW1 63 aa-1.35□□□□□ -2.63
SCARNA18-201ENST00000459004 IQGAP3Q86VI3 1631 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 AKAP12Q02952 1782 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 A0A1B0GWA3 101 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 MPC2O95563 127 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 HMGN2P05204 90 aaKnown RBP-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 SELENOWP63302 87 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 CATR1Q13166 79 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 C2orf88Q9BSF0 95 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 NMES1Q9C002 83 aa-1.36□□□□□ -2.63
SCARNA18-201ENST00000459004 EFCAB5A4FU69 1503 aa-1.37□□□□□ -2.63
SCARNA18-201ENST00000459004 IQGAP2Q13576 1575 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 SAMD9LQ8IVG5 1584 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 TRBV25-1A0A075B6N4 114 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 LOC105371267A0A1B0GV96 52 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 NAP1L6A6NFF2 107 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 APOC2P02655 101 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 LINC00032P0C843 101 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 RBP2P50120 134 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 LINC00308Q8TCZ7 52 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 UBL5Q9BZL1 73 aa-1.38□□□□□ -2.63
SCARNA18-201ENST00000459004 IQCF6A8MYZ5 107 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 S100A12P80511 92 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 PRCDQ00LT1 54 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 NREPQ16612 68 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 SNHG12Q9BXW3 62 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 TMEM167BQ9NRX6 74 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 CACFD1Q9UGQ2 172 aa-1.39□□□□□ -2.63
SCARNA18-201ENST00000459004 A0A1B0GUT8 65 aa-1.4□□□□□ -2.63
SCARNA18-201ENST00000459004 M0R1W7 72 aa-1.4□□□□□ -2.63
SCARNA18-201ENST00000459004 GNG7O60262 68 aa-1.4□□□□□ -2.63
SCARNA18-201ENST00000459004 TMEM167AQ8TBQ9 72 aa-1.4□□□□□ -2.63
SCARNA18-201ENST00000459004 COX6CP09669 75 aa-1.41□□□□□ -2.64
SCARNA18-201ENST00000459004 HMGN3Q15651 99 aa-1.41□□□□□ -2.64
SCARNA18-201ENST00000459004 UMAD1C9J7I0 102 aa-1.42□□□□□ -2.64
SCARNA18-201ENST00000459004 K7EIM0 57 aa-1.42□□□□□ -2.64
SCARNA18-201ENST00000459004 CGREF1Q99674 301 aa-1.42□□□□□ -2.64
SCARNA18-201ENST00000459004 ATP6V1G2-DDX39BF2Z307 99 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 F6UZH7 168 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 SMIM13P0DJ93 91 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 TMEM203Q969S6 136 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 C12orf57Q99622 126 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 PRO1854Q9UHT4 67 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 HILPDAQ9Y5L2 63 aa-1.43□□□□□ -2.64
SCARNA18-201ENST00000459004 KTN1Q86UP2 1357 aaKnown RBP-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 K7EMI3 77 aa-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 PDCD5O14737 125 aa-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 TRAPPC2P0DI81 140 aa-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 TRAPPC2BP0DI82 140 aa-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 S100A10P60903 97 aa-1.44□□□□□ -2.64
SCARNA18-201ENST00000459004 PLGLAQ15195 96 aa-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms