RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MDN1Q9NU22 5596 aa7.15□□□□□ -1.27
CHCHD3-204ENST00000457942 H0Y9P7 68 aa7.14□□□□□ -1.27
CHCHD3-204ENST00000457942 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
CHCHD3-204ENST00000457942 UQCRQO14949 82 aa7.13□□□□□ -1.27
CHCHD3-204ENST00000457942 Q5VV11 94 aa7.12□□□□□ -1.27
CHCHD3-204ENST00000457942 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
CHCHD3-204ENST00000457942 KMT2DO14686 5537 aa7.08□□□□□ -1.28
CHCHD3-204ENST00000457942 MT1BP07438 61 aa7.07□□□□□ -1.28
CHCHD3-204ENST00000457942 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
CHCHD3-204ENST00000457942 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
CHCHD3-204ENST00000457942 ATOX1O00244 68 aa7.04□□□□□ -1.28
CHCHD3-204ENST00000457942 LINC00208Q96KT6 92 aa7.04□□□□□ -1.28
CHCHD3-204ENST00000457942 OCR1Q9BZK8 76 aa7.04□□□□□ -1.28
CHCHD3-204ENST00000457942 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
CHCHD3-204ENST00000457942 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
CHCHD3-204ENST00000457942 MT-ATP8P03928 68 aa7.01□□□□□ -1.29
CHCHD3-204ENST00000457942 K7ERU9 68 aa6.99□□□□□ -1.29
CHCHD3-204ENST00000457942 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
CHCHD3-204ENST00000457942 MP68P56378 58 aa6.99□□□□□ -1.29
CHCHD3-204ENST00000457942 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
CHCHD3-204ENST00000457942 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
CHCHD3-204ENST00000457942 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
CHCHD3-204ENST00000457942 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
CHCHD3-204ENST00000457942 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
CHCHD3-204ENST00000457942 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
CHCHD3-204ENST00000457942 NDUFC1O43677 76 aa6.9□□□□□ -1.3
CHCHD3-204ENST00000457942 H3BPC8 53 aa6.85□□□□□ -1.31
CHCHD3-204ENST00000457942 SPRR2EP22531 72 aa6.83□□□□□ -1.32
CHCHD3-204ENST00000457942 SPRR2BP35325 72 aa6.83□□□□□ -1.32
CHCHD3-204ENST00000457942 SPRR2AP35326 72 aa6.83□□□□□ -1.32
CHCHD3-204ENST00000457942 A8MUN3 132 aa6.82□□□□□ -1.32
CHCHD3-204ENST00000457942 H0YAA0 97 aa6.81□□□□□ -1.32
CHCHD3-204ENST00000457942 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
CHCHD3-204ENST00000457942 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
CHCHD3-204ENST00000457942 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
CHCHD3-204ENST00000457942 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
CHCHD3-204ENST00000457942 DMAC1Q96GE9 116 aa6.75□□□□□ -1.33
CHCHD3-204ENST00000457942 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
CHCHD3-204ENST00000457942 KRTAP2-2Q9BYT5 123 aa6.7□□□□□ -1.34
CHCHD3-204ENST00000457942 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
CHCHD3-204ENST00000457942 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
CHCHD3-204ENST00000457942 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
CHCHD3-204ENST00000457942 R4GN34 69 aa6.65□□□□□ -1.34
CHCHD3-204ENST00000457942 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
CHCHD3-204ENST00000457942 SERP2Q8N6R1 65 aa6.63□□□□□ -1.35
CHCHD3-204ENST00000457942 SPRR2DP22532 72 aa6.61□□□□□ -1.35
CHCHD3-204ENST00000457942 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
CHCHD3-204ENST00000457942 M0QZ58 72 aa6.6□□□□□ -1.35
CHCHD3-204ENST00000457942 ACYP2P14621 99 aa6.6□□□□□ -1.35
CHCHD3-204ENST00000457942 MT1XP80297 61 aa6.6□□□□□ -1.35
CHCHD3-204ENST00000457942 P0C880 135 aa6.59□□□□□ -1.35
CHCHD3-204ENST00000457942 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
CHCHD3-204ENST00000457942 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
CHCHD3-204ENST00000457942 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
CHCHD3-204ENST00000457942 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
CHCHD3-204ENST00000457942 GPR98Q8WXG9 6306 aa6.5□□□□□ -1.37
CHCHD3-204ENST00000457942 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
CHCHD3-204ENST00000457942 COX7CP15954 63 aa6.48□□□□□ -1.37
CHCHD3-204ENST00000457942 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
CHCHD3-204ENST00000457942 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
CHCHD3-204ENST00000457942 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
CHCHD3-204ENST00000457942 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
CHCHD3-204ENST00000457942 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
CHCHD3-204ENST00000457942 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
CHCHD3-204ENST00000457942 COA5Q86WW8 74 aa6.38□□□□□ -1.39
CHCHD3-204ENST00000457942 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
CHCHD3-204ENST00000457942 H7BZZ5 65 aa6.35□□□□□ -1.39
CHCHD3-204ENST00000457942 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3-204ENST00000457942 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
CHCHD3-204ENST00000457942 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
CHCHD3-204ENST00000457942 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
CHCHD3-204ENST00000457942 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
CHCHD3-204ENST00000457942 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
CHCHD3-204ENST00000457942 SEC61GP60059 68 aa6.15□□□□□ -1.42
CHCHD3-204ENST00000457942 SERP1Q9Y6X1 66 aa6.15□□□□□ -1.42
CHCHD3-204ENST00000457942 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
CHCHD3-204ENST00000457942 A0A0D9SG42 100 aa6.09□□□□□ -1.43
CHCHD3-204ENST00000457942 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
CHCHD3-204ENST00000457942 A0A1B0GU33 70 aa6.05□□□□□ -1.44
CHCHD3-204ENST00000457942 A0A1B0GU69 56 aa6.04□□□□□ -1.44
CHCHD3-204ENST00000457942 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
CHCHD3-204ENST00000457942 TMEM258P61165 79 aa5.97□□□□□ -1.45
CHCHD3-204ENST00000457942 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
CHCHD3-204ENST00000457942 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
CHCHD3-204ENST00000457942 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
CHCHD3-204ENST00000457942 A8MU10 97 aa5.91□□□□□ -1.46
CHCHD3-204ENST00000457942 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
CHCHD3-204ENST00000457942 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
CHCHD3-204ENST00000457942 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
CHCHD3-204ENST00000457942 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
CHCHD3-204ENST00000457942 MT1EP04732 61 aa5.86□□□□□ -1.47
CHCHD3-204ENST00000457942 MT4P47944 62 aa5.86□□□□□ -1.47
CHCHD3-204ENST00000457942 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
CHCHD3-204ENST00000457942 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
CHCHD3-204ENST00000457942 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
CHCHD3-204ENST00000457942 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
CHCHD3-204ENST00000457942 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
CHCHD3-204ENST00000457942 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
CHCHD3-204ENST00000457942 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
CHCHD3-204ENST00000457942 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms