RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
RFX3-210ENST00000457373 UQCRQO14949 82 aa4.87□□□□□ -1.63
RFX3-210ENST00000457373 MT2AP02795 61 aa4.87□□□□□ -1.63
RFX3-210ENST00000457373 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
RFX3-210ENST00000457373 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
RFX3-210ENST00000457373 H0Y9P7 68 aa4.85□□□□□ -1.63
RFX3-210ENST00000457373 C1orf64Q8NEQ6 169 aa4.85□□□□□ -1.63
RFX3-210ENST00000457373 MT1FP04733 61 aa4.83□□□□□ -1.64
RFX3-210ENST00000457373 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
RFX3-210ENST00000457373 K7ERU9 68 aa4.82□□□□□ -1.64
RFX3-210ENST00000457373 ATOX1O00244 68 aa4.82□□□□□ -1.64
RFX3-210ENST00000457373 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
RFX3-210ENST00000457373 SCGB1A1P11684 91 aa4.79□□□□□ -1.64
RFX3-210ENST00000457373 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
RFX3-210ENST00000457373 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
RFX3-210ENST00000457373 S4R3F8 94 aa4.79□□□□□ -1.64
RFX3-210ENST00000457373 MP68P56378 58 aa4.78□□□□□ -1.64
RFX3-210ENST00000457373 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
RFX3-210ENST00000457373 MT-ATP8P03928 68 aa4.77□□□□□ -1.65
RFX3-210ENST00000457373 LCA10Q71F78 164 aa4.75□□□□□ -1.65
RFX3-210ENST00000457373 IMUPQ9GZP8 106 aa4.75□□□□□ -1.65
RFX3-210ENST00000457373 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
RFX3-210ENST00000457373 KLKP1Q107X0 134 aa4.74□□□□□ -1.65
RFX3-210ENST00000457373 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
RFX3-210ENST00000457373 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
RFX3-210ENST00000457373 H3BPC8 53 aa4.7□□□□□ -1.66
RFX3-210ENST00000457373 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
RFX3-210ENST00000457373 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
RFX3-210ENST00000457373 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
RFX3-210ENST00000457373 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
RFX3-210ENST00000457373 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
RFX3-210ENST00000457373 A8MUN3 132 aa4.66□□□□□ -1.66
RFX3-210ENST00000457373 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
RFX3-210ENST00000457373 USH2AO75445 5202 aa4.66□□□□□ -1.66
RFX3-210ENST00000457373 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
RFX3-210ENST00000457373 NDUFC1O43677 76 aa4.64□□□□□ -1.67
RFX3-210ENST00000457373 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
RFX3-210ENST00000457373 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
RFX3-210ENST00000457373 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
RFX3-210ENST00000457373 C20orf197Q8N268 126 aa4.54□□□□□ -1.68
RFX3-210ENST00000457373 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
RFX3-210ENST00000457373 ACYP2P14621 99 aa4.53□□□□□ -1.68
RFX3-210ENST00000457373 ADM2Q7Z4H4 148 aa4.53□□□□□ -1.68
RFX3-210ENST00000457373 H0YAA0 97 aa4.52□□□□□ -1.69
RFX3-210ENST00000457373 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
RFX3-210ENST00000457373 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
RFX3-210ENST00000457373 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
RFX3-210ENST00000457373 Q5VV11 94 aa4.49□□□□□ -1.69
RFX3-210ENST00000457373 MT1BP07438 61 aa4.47□□□□□ -1.69
RFX3-210ENST00000457373 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
RFX3-210ENST00000457373 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
RFX3-210ENST00000457373 COX7CP15954 63 aa4.45□□□□□ -1.7
RFX3-210ENST00000457373 MT3P25713 68 aa4.45□□□□□ -1.7
RFX3-210ENST00000457373 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
RFX3-210ENST00000457373 P0C880 135 aa4.44□□□□□ -1.7
RFX3-210ENST00000457373 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
RFX3-210ENST00000457373 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
RFX3-210ENST00000457373 R4GN34 69 aa4.4□□□□□ -1.71
RFX3-210ENST00000457373 A6NN06 94 aa4.39□□□□□ -1.71
RFX3-210ENST00000457373 M0QZ58 72 aa4.38□□□□□ -1.71
RFX3-210ENST00000457373 ANAPC13Q9BS18 74 aa4.37□□□□□ -1.71
RFX3-210ENST00000457373 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
RFX3-210ENST00000457373 H7BZZ5 65 aa4.34□□□□□ -1.71
RFX3-210ENST00000457373 COA5Q86WW8 74 aa4.34□□□□□ -1.71
RFX3-210ENST00000457373 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
RFX3-210ENST00000457373 V9GYY9 64 aa4.33□□□□□ -1.72
RFX3-210ENST00000457373 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
RFX3-210ENST00000457373 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
RFX3-210ENST00000457373 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
RFX3-210ENST00000457373 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
RFX3-210ENST00000457373 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
RFX3-210ENST00000457373 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
RFX3-210ENST00000457373 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
RFX3-210ENST00000457373 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
RFX3-210ENST00000457373 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
RFX3-210ENST00000457373 MT1XP80297 61 aa4.21□□□□□ -1.74
RFX3-210ENST00000457373 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
RFX3-210ENST00000457373 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
RFX3-210ENST00000457373 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
RFX3-210ENST00000457373 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
RFX3-210ENST00000457373 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
RFX3-210ENST00000457373 ATP5EP56381 51 aaPredicted RBP4.15□□□□□ -1.75
RFX3-210ENST00000457373 A0A1B0GU33 70 aa4.14□□□□□ -1.75
RFX3-210ENST00000457373 A0A1B0GU69 56 aa4.13□□□□□ -1.75
RFX3-210ENST00000457373 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
RFX3-210ENST00000457373 A0A0D9SG42 100 aa4.11□□□□□ -1.75
RFX3-210ENST00000457373 TMEM258P61165 79 aa4.11□□□□□ -1.75
RFX3-210ENST00000457373 PSPHP1O15172 72 aa4.08□□□□□ -1.76
RFX3-210ENST00000457373 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
RFX3-210ENST00000457373 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
RFX3-210ENST00000457373 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
RFX3-210ENST00000457373 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
RFX3-210ENST00000457373 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
RFX3-210ENST00000457373 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
RFX3-210ENST00000457373 KMT2DO14686 5537 aa4.02□□□□□ -1.77
RFX3-210ENST00000457373 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
RFX3-210ENST00000457373 A8MU10 97 aa4□□□□□ -1.77
RFX3-210ENST00000457373 KRTAP12-1P59990 96 aa4□□□□□ -1.77
RFX3-210ENST00000457373 KRTAP10-12P60413 245 aa4□□□□□ -1.77
RFX3-210ENST00000457373 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms