RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
RIF1-207ENST00000454583 Q75L30 129 aa2.6□□□□□ -1.99
RIF1-207ENST00000454583 KRTAP4-7Q9BYR0 210 aa2.6□□□□□ -1.99
RIF1-207ENST00000454583 C1orf64Q8NEQ6 169 aa2.59□□□□□ -1.99
RIF1-207ENST00000454583 IGKV2-30P06310 120 aa2.59□□□□□ -1.99
RIF1-207ENST00000454583 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
RIF1-207ENST00000454583 HRES1P13985 223 aa2.57□□□□□ -2
RIF1-207ENST00000454583 DMAC1Q96GE9 116 aa2.57□□□□□ -2
RIF1-207ENST00000454583 H0Y9P7 68 aa2.57□□□□□ -2
RIF1-207ENST00000454583 WFDC13Q8IUB5 93 aa2.56□□□□□ -2
RIF1-207ENST00000454583 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
RIF1-207ENST00000454583 HRCT1Q6UXD1 115 aa2.56□□□□□ -2
RIF1-207ENST00000454583 LIMD2Q9BT23 127 aa2.55□□□□□ -2
RIF1-207ENST00000454583 NDUFB1O75438 58 aa2.54□□□□□ -2
RIF1-207ENST00000454583 IGHV6-1A0A0B4J1U7 121 aa2.54□□□□□ -2
RIF1-207ENST00000454583 RETNLBQ9BQ08 111 aa2.54□□□□□ -2
RIF1-207ENST00000454583 SMIM26A0A096LP01 95 aa2.53□□□□□ -2
RIF1-207ENST00000454583 LINC00313P59037 77 aa2.53□□□□□ -2.01
RIF1-207ENST00000454583 Q5VV11 94 aa2.52□□□□□ -2.01
RIF1-207ENST00000454583 IGKV2D-30A0A075B6S6 120 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 LINC01558Q9Y6Z2 57 aa2.51□□□□□ -2.01
RIF1-207ENST00000454583 MT1HP80294 61 aa2.5□□□□□ -2.01
RIF1-207ENST00000454583 COA5Q86WW8 74 aa2.49□□□□□ -2.01
RIF1-207ENST00000454583 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
RIF1-207ENST00000454583 MP68P56378 58 aa2.48□□□□□ -2.01
RIF1-207ENST00000454583 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
RIF1-207ENST00000454583 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
RIF1-207ENST00000454583 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
RIF1-207ENST00000454583 A8MU10 97 aa2.45□□□□□ -2.02
RIF1-207ENST00000454583 RBM12B-AS1Q9P1G2 102 aa2.45□□□□□ -2.02
RIF1-207ENST00000454583 LCA10Q71F78 164 aa2.44□□□□□ -2.02
RIF1-207ENST00000454583 A8MUN3 132 aa2.44□□□□□ -2.02
RIF1-207ENST00000454583 PRAC1Q96KF2 57 aa2.44□□□□□ -2.02
RIF1-207ENST00000454583 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
RIF1-207ENST00000454583 KRTAP10-6P60371 365 aaPredicted RBP2.43□□□□□ -2.02
RIF1-207ENST00000454583 BRK1Q8WUW1 75 aa2.43□□□□□ -2.02
RIF1-207ENST00000454583 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
RIF1-207ENST00000454583 DMBT1Q9UGM3 2413 aaPredicted RBP2.42□□□□□ -2.02
RIF1-207ENST00000454583 PCOTHQ58A44 107 aa2.42□□□□□ -2.02
RIF1-207ENST00000454583 USH2AO75445 5202 aa2.42□□□□□ -2.02
RIF1-207ENST00000454583 C7orf65Q6ZTY9 151 aa2.41□□□□□ -2.02
RIF1-207ENST00000454583 ACYP2P14621 99 aa2.39□□□□□ -2.03
RIF1-207ENST00000454583 PRR4Q16378 134 aa2.39□□□□□ -2.03
RIF1-207ENST00000454583 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
RIF1-207ENST00000454583 A6NN06 94 aa2.39□□□□□ -2.03
RIF1-207ENST00000454583 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
RIF1-207ENST00000454583 SPINK7P58062 85 aa2.38□□□□□ -2.03
RIF1-207ENST00000454583 MT2AP02795 61 aa2.36□□□□□ -2.03
RIF1-207ENST00000454583 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
RIF1-207ENST00000454583 H0YAA0 97 aa2.36□□□□□ -2.03
RIF1-207ENST00000454583 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
RIF1-207ENST00000454583 NDUFS5O43920 106 aa2.35□□□□□ -2.03
RIF1-207ENST00000454583 MT1FP04733 61 aa2.35□□□□□ -2.03
RIF1-207ENST00000454583 SEC61BP60468 96 aaKnown RBP2.35□□□□□ -2.03
RIF1-207ENST00000454583 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
RIF1-207ENST00000454583 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
RIF1-207ENST00000454583 PSPHP1O15172 72 aa2.32□□□□□ -2.04
RIF1-207ENST00000454583 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
RIF1-207ENST00000454583 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
RIF1-207ENST00000454583 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
RIF1-207ENST00000454583 ATP11AUNQ6ZP68 121 aa2.3□□□□□ -2.04
RIF1-207ENST00000454583 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
RIF1-207ENST00000454583 MT1BP07438 61 aa2.28□□□□□ -2.05
RIF1-207ENST00000454583 A6NED7 52 aa2.25□□□□□ -2.05
RIF1-207ENST00000454583 P0C880 135 aa2.25□□□□□ -2.05
RIF1-207ENST00000454583 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
RIF1-207ENST00000454583 CHKB-CPT1BH3BT56 60 aa2.24□□□□□ -2.05
RIF1-207ENST00000454583 A0A1B0GU69 56 aa2.23□□□□□ -2.05
RIF1-207ENST00000454583 S4R3F8 94 aa2.23□□□□□ -2.05
RIF1-207ENST00000454583 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
RIF1-207ENST00000454583 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
RIF1-207ENST00000454583 UQCR11O14957 56 aa2.2□□□□□ -2.06
RIF1-207ENST00000454583 KRTAP19-6Q3LI70 58 aa2.2□□□□□ -2.06
RIF1-207ENST00000454583 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
RIF1-207ENST00000454583 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
RIF1-207ENST00000454583 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
RIF1-207ENST00000454583 LINC01554Q52M75 96 aa2.19□□□□□ -2.06
RIF1-207ENST00000454583 A0A1B0GU33 70 aa2.19□□□□□ -2.06
RIF1-207ENST00000454583 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
RIF1-207ENST00000454583 MT1XP80297 61 aa2.16□□□□□ -2.06
RIF1-207ENST00000454583 LUZP6Q538Z0 58 aa2.15□□□□□ -2.06
RIF1-207ENST00000454583 M0QZ58 72 aa2.14□□□□□ -2.07
RIF1-207ENST00000454583 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
RIF1-207ENST00000454583 MT3P25713 68 aa2.13□□□□□ -2.07
RIF1-207ENST00000454583 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
RIF1-207ENST00000454583 CSAG1Q6PB30 78 aa2.1□□□□□ -2.07
RIF1-207ENST00000454583 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
RIF1-207ENST00000454583 KMT2DO14686 5537 aa2.1□□□□□ -2.07
RIF1-207ENST00000454583 KRTAP25-1Q3LHN0 102 aa2.06□□□□□ -2.08
RIF1-207ENST00000454583 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
RIF1-207ENST00000454583 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
RIF1-207ENST00000454583 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
RIF1-207ENST00000454583 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
RIF1-207ENST00000454583 ROMO1P60602 79 aa2.04□□□□□ -2.08
RIF1-207ENST00000454583 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
RIF1-207ENST00000454583 KRTAP10-7P60409 375 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms