RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
NECAP1-202ENST00000450991 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
NECAP1-202ENST00000450991 ADM2Q7Z4H4 148 aa4.53□□□□□ -1.68
NECAP1-202ENST00000450991 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
NECAP1-202ENST00000450991 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
NECAP1-202ENST00000450991 A8MUU9 505 aa4.5□□□□□ -1.69
NECAP1-202ENST00000450991 LPAP08519 4548 aa4.48□□□□□ -1.69
NECAP1-202ENST00000450991 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
NECAP1-202ENST00000450991 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
NECAP1-202ENST00000450991 HERC1Q15751 4861 aa4.46□□□□□ -1.69
NECAP1-202ENST00000450991 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
NECAP1-202ENST00000450991 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
NECAP1-202ENST00000450991 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
NECAP1-202ENST00000450991 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
NECAP1-202ENST00000450991 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
NECAP1-202ENST00000450991 XP32Q5T750 250 aa4.43□□□□□ -1.7
NECAP1-202ENST00000450991 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
NECAP1-202ENST00000450991 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
NECAP1-202ENST00000450991 LRP2P98164 4655 aa4.42□□□□□ -1.7
NECAP1-202ENST00000450991 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
NECAP1-202ENST00000450991 HRES1P13985 223 aa4.4□□□□□ -1.7
NECAP1-202ENST00000450991 RPL37P61927 97 aaKnown RBP4.4□□□□□ -1.71
NECAP1-202ENST00000450991 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
NECAP1-202ENST00000450991 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
NECAP1-202ENST00000450991 P0C880 135 aa4.37□□□□□ -1.71
NECAP1-202ENST00000450991 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
NECAP1-202ENST00000450991 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
NECAP1-202ENST00000450991 SPINK7P58062 85 aa4.34□□□□□ -1.72
NECAP1-202ENST00000450991 COA5Q86WW8 74 aa4.34□□□□□ -1.72
NECAP1-202ENST00000450991 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
NECAP1-202ENST00000450991 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
NECAP1-202ENST00000450991 ACYP2P14621 99 aa4.31□□□□□ -1.72
NECAP1-202ENST00000450991 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
NECAP1-202ENST00000450991 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
NECAP1-202ENST00000450991 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
NECAP1-202ENST00000450991 UQCR11O14957 56 aa4.26□□□□□ -1.73
NECAP1-202ENST00000450991 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
NECAP1-202ENST00000450991 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
NECAP1-202ENST00000450991 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
NECAP1-202ENST00000450991 MUC2Q02817 5179 aa4.24□□□□□ -1.73
NECAP1-202ENST00000450991 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
NECAP1-202ENST00000450991 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
NECAP1-202ENST00000450991 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
NECAP1-202ENST00000450991 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
NECAP1-202ENST00000450991 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
NECAP1-202ENST00000450991 S4R3F8 94 aa4.11□□□□□ -1.75
NECAP1-202ENST00000450991 A0A1B0GU33 70 aa4.1□□□□□ -1.75
NECAP1-202ENST00000450991 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
NECAP1-202ENST00000450991 A0A1B0GU69 56 aa4.08□□□□□ -1.76
NECAP1-202ENST00000450991 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
NECAP1-202ENST00000450991 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
NECAP1-202ENST00000450991 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
NECAP1-202ENST00000450991 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
NECAP1-202ENST00000450991 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
NECAP1-202ENST00000450991 H0YAA0 97 aa3.94□□□□□ -1.78
NECAP1-202ENST00000450991 MT1HP80294 61 aa3.92□□□□□ -1.78
NECAP1-202ENST00000450991 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
NECAP1-202ENST00000450991 M0R2T5 61 aa3.91□□□□□ -1.78
NECAP1-202ENST00000450991 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
NECAP1-202ENST00000450991 M0QZ58 72 aa3.82□□□□□ -1.8
NECAP1-202ENST00000450991 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
NECAP1-202ENST00000450991 R4GN34 69 aa3.81□□□□□ -1.8
NECAP1-202ENST00000450991 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
NECAP1-202ENST00000450991 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
NECAP1-202ENST00000450991 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
NECAP1-202ENST00000450991 A0A0D9SG42 100 aa3.78□□□□□ -1.81
NECAP1-202ENST00000450991 KRTAP9-8Q9BYQ0 159 aa3.76□□□□□ -1.81
NECAP1-202ENST00000450991 MT2AP02795 61 aa3.76□□□□□ -1.81
NECAP1-202ENST00000450991 MT1FP04733 61 aa3.75□□□□□ -1.81
NECAP1-202ENST00000450991 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
NECAP1-202ENST00000450991 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
NECAP1-202ENST00000450991 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
NECAP1-202ENST00000450991 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
NECAP1-202ENST00000450991 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
NECAP1-202ENST00000450991 INE1O15225 51 aa3.69□□□□□ -1.82
NECAP1-202ENST00000450991 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
NECAP1-202ENST00000450991 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
NECAP1-202ENST00000450991 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
NECAP1-202ENST00000450991 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
NECAP1-202ENST00000450991 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
NECAP1-202ENST00000450991 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
NECAP1-202ENST00000450991 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
NECAP1-202ENST00000450991 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
NECAP1-202ENST00000450991 USH2AO75445 5202 aa3.55□□□□□ -1.84
NECAP1-202ENST00000450991 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
NECAP1-202ENST00000450991 MT1BP07438 61 aa3.53□□□□□ -1.84
NECAP1-202ENST00000450991 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
NECAP1-202ENST00000450991 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
NECAP1-202ENST00000450991 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
NECAP1-202ENST00000450991 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
NECAP1-202ENST00000450991 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
NECAP1-202ENST00000450991 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
NECAP1-202ENST00000450991 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
NECAP1-202ENST00000450991 MT1XP80297 61 aa3.41□□□□□ -1.86
NECAP1-202ENST00000450991 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
NECAP1-202ENST00000450991 TNP1P09430 55 aa3.38□□□□□ -1.87
NECAP1-202ENST00000450991 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
NECAP1-202ENST00000450991 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
NECAP1-202ENST00000450991 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
NECAP1-202ENST00000450991 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms