RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 A0A087WVE0 104 aa9.02□□□□□ -0.97
LRCH3-208ENST00000443727 LINC00643Q86TS7 51 aa9.02□□□□□ -0.97
LRCH3-208ENST00000443727 MT1BP07438 61 aa8.98□□□□□ -0.97
LRCH3-208ENST00000443727 A6NN06 94 aa8.97□□□□□ -0.97
LRCH3-208ENST00000443727 KRTAP19-8Q3LI54 63 aa8.96□□□□□ -0.98
LRCH3-208ENST00000443727 NDUFC1O43677 76 aa8.95□□□□□ -0.98
LRCH3-208ENST00000443727 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
LRCH3-208ENST00000443727 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
LRCH3-208ENST00000443727 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
LRCH3-208ENST00000443727 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
LRCH3-208ENST00000443727 A0A1B0GV90 55 aa8.9□□□□□ -0.98
LRCH3-208ENST00000443727 A8MUN3 132 aa8.89□□□□□ -0.99
LRCH3-208ENST00000443727 MP68P56378 58 aa8.89□□□□□ -0.99
LRCH3-208ENST00000443727 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
LRCH3-208ENST00000443727 H0YAA0 97 aa8.82□□□□□ -1
LRCH3-208ENST00000443727 J3QR89 54 aa8.8□□□□□ -1
LRCH3-208ENST00000443727 KRTAP10-5P60370 271 aa8.8□□□□□ -1
LRCH3-208ENST00000443727 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
LRCH3-208ENST00000443727 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
LRCH3-208ENST00000443727 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
LRCH3-208ENST00000443727 H3BPC8 53 aa8.71□□□□□ -1.02
LRCH3-208ENST00000443727 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
LRCH3-208ENST00000443727 C20orf197Q8N268 126 aa8.59□□□□□ -1.03
LRCH3-208ENST00000443727 R4GN34 69 aa8.57□□□□□ -1.04
LRCH3-208ENST00000443727 NEBP20929 6669 aa8.56□□□□□ -1.04
LRCH3-208ENST00000443727 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
LRCH3-208ENST00000443727 P0C880 135 aa8.53□□□□□ -1.04
LRCH3-208ENST00000443727 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
LRCH3-208ENST00000443727 M0QZ58 72 aa8.5□□□□□ -1.05
LRCH3-208ENST00000443727 MUC12Q9UKN1 5478 aa8.47□□□□□ -1.05
LRCH3-208ENST00000443727 KRTAP5-9P26371 169 aa8.46□□□□□ -1.06
LRCH3-208ENST00000443727 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
LRCH3-208ENST00000443727 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
LRCH3-208ENST00000443727 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
LRCH3-208ENST00000443727 ACYP2P14621 99 aa8.43□□□□□ -1.06
LRCH3-208ENST00000443727 K7ERU9 68 aa8.42□□□□□ -1.06
LRCH3-208ENST00000443727 MT1XP80297 61 aa8.42□□□□□ -1.06
LRCH3-208ENST00000443727 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
LRCH3-208ENST00000443727 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
LRCH3-208ENST00000443727 KMT2DO14686 5537 aa8.35□□□□□ -1.07
LRCH3-208ENST00000443727 CHKB-CPT1BH3BT56 60 aa8.32□□□□□ -1.08
LRCH3-208ENST00000443727 KRTAP20-1Q3LI63 56 aa8.3□□□□□ -1.08
LRCH3-208ENST00000443727 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
LRCH3-208ENST00000443727 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
LRCH3-208ENST00000443727 MDN1Q9NU22 5596 aa8.26□□□□□ -1.09
LRCH3-208ENST00000443727 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
LRCH3-208ENST00000443727 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
LRCH3-208ENST00000443727 SPRR2EP22531 72 aa8.16□□□□□ -1.1
LRCH3-208ENST00000443727 SPRR2BP35325 72 aa8.16□□□□□ -1.1
LRCH3-208ENST00000443727 SPRR2AP35326 72 aa8.16□□□□□ -1.1
LRCH3-208ENST00000443727 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
LRCH3-208ENST00000443727 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
LRCH3-208ENST00000443727 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
LRCH3-208ENST00000443727 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
LRCH3-208ENST00000443727 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
LRCH3-208ENST00000443727 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
LRCH3-208ENST00000443727 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-208ENST00000443727 KRTAP10-12P60413 245 aa8□□□□□ -1.13
LRCH3-208ENST00000443727 LCE1AQ5T7P2 110 aa7.99□□□□□ -1.13
LRCH3-208ENST00000443727 COA5Q86WW8 74 aa7.94□□□□□ -1.14
LRCH3-208ENST00000443727 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
LRCH3-208ENST00000443727 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
LRCH3-208ENST00000443727 SPRR2DP22532 72 aa7.89□□□□□ -1.15
LRCH3-208ENST00000443727 SEC61GP60059 68 aa7.89□□□□□ -1.15
LRCH3-208ENST00000443727 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
LRCH3-208ENST00000443727 COX7CP15954 63 aa7.84□□□□□ -1.15
LRCH3-208ENST00000443727 KRTAP2-2Q9BYT5 123 aa7.8□□□□□ -1.16
LRCH3-208ENST00000443727 KRTAP2-1Q9BYU5 128 aa7.8□□□□□ -1.16
LRCH3-208ENST00000443727 A0A0D9SG42 100 aa7.78□□□□□ -1.16
LRCH3-208ENST00000443727 H7BZZ5 65 aa7.72□□□□□ -1.17
LRCH3-208ENST00000443727 A0A1B0GU33 70 aa7.71□□□□□ -1.18
LRCH3-208ENST00000443727 SPATA8Q6RVD6 105 aa7.71□□□□□ -1.18
LRCH3-208ENST00000443727 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
LRCH3-208ENST00000443727 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
LRCH3-208ENST00000443727 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
LRCH3-208ENST00000443727 A0A1B0GU69 56 aa7.57□□□□□ -1.2
LRCH3-208ENST00000443727 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
LRCH3-208ENST00000443727 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
LRCH3-208ENST00000443727 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
LRCH3-208ENST00000443727 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
LRCH3-208ENST00000443727 MT1EP04732 61 aa7.47□□□□□ -1.21
LRCH3-208ENST00000443727 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
LRCH3-208ENST00000443727 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
LRCH3-208ENST00000443727 A8MU10 97 aa7.41□□□□□ -1.22
LRCH3-208ENST00000443727 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
LRCH3-208ENST00000443727 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
LRCH3-208ENST00000443727 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
LRCH3-208ENST00000443727 KRTAP19-5Q3LI72 72 aa7.37□□□□□ -1.23
LRCH3-208ENST00000443727 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
LRCH3-208ENST00000443727 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-208ENST00000443727 DSTQ03001 7570 aaKnown RBP7.3□□□□□ -1.24
LRCH3-208ENST00000443727 TNP1P09430 55 aa7.25□□□□□ -1.25
LRCH3-208ENST00000443727 MT1GP13640 62 aa7.25□□□□□ -1.25
LRCH3-208ENST00000443727 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
LRCH3-208ENST00000443727 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
LRCH3-208ENST00000443727 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
LRCH3-208ENST00000443727 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
LRCH3-208ENST00000443727 MT1LQ93083 61 aa7.14□□□□□ -1.27
LRCH3-208ENST00000443727 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
LRCH3-208ENST00000443727 TMEM258P61165 79 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms