RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 Q5VV11 94 aa8.44□□□□□ -1.06
HMGB3P22-201ENST00000442010 KRTAP6-3Q3LI67 103 aa8.43□□□□□ -1.06
HMGB3P22-201ENST00000442010 H0Y9P7 68 aa8.41□□□□□ -1.06
HMGB3P22-201ENST00000442010 ATOX1O00244 68 aa8.4□□□□□ -1.06
HMGB3P22-201ENST00000442010 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
HMGB3P22-201ENST00000442010 A6NN06 94 aa8.37□□□□□ -1.07
HMGB3P22-201ENST00000442010 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
HMGB3P22-201ENST00000442010 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
HMGB3P22-201ENST00000442010 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
HMGB3P22-201ENST00000442010 A0A1B0GV90 55 aa8.29□□□□□ -1.08
HMGB3P22-201ENST00000442010 H0YAA0 97 aa8.29□□□□□ -1.08
HMGB3P22-201ENST00000442010 NDUFC1O43677 76 aa8.29□□□□□ -1.08
HMGB3P22-201ENST00000442010 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
HMGB3P22-201ENST00000442010 A8MUN3 132 aa8.28□□□□□ -1.08
HMGB3P22-201ENST00000442010 LINC00208Q96KT6 92 aa8.27□□□□□ -1.09
HMGB3P22-201ENST00000442010 MP68P56378 58 aa8.2□□□□□ -1.1
HMGB3P22-201ENST00000442010 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
HMGB3P22-201ENST00000442010 NEBP20929 6669 aa8.14□□□□□ -1.11
HMGB3P22-201ENST00000442010 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
HMGB3P22-201ENST00000442010 H3BPC8 53 aa8.11□□□□□ -1.11
HMGB3P22-201ENST00000442010 J3QR89 54 aa8.08□□□□□ -1.12
HMGB3P22-201ENST00000442010 KRTAP5-9P26371 169 aa8.05□□□□□ -1.12
HMGB3P22-201ENST00000442010 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
HMGB3P22-201ENST00000442010 P0C880 135 aa8□□□□□ -1.13
HMGB3P22-201ENST00000442010 SCGB1A1P11684 91 aa8□□□□□ -1.13
HMGB3P22-201ENST00000442010 MT1XP80297 61 aa7.97□□□□□ -1.13
HMGB3P22-201ENST00000442010 R4GN34 69 aa7.94□□□□□ -1.14
HMGB3P22-201ENST00000442010 KMT2DO14686 5537 aa7.93□□□□□ -1.14
HMGB3P22-201ENST00000442010 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
HMGB3P22-201ENST00000442010 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
HMGB3P22-201ENST00000442010 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
HMGB3P22-201ENST00000442010 M0QZ58 72 aa7.88□□□□□ -1.15
HMGB3P22-201ENST00000442010 MT-ATP8P03928 68 aa7.87□□□□□ -1.15
HMGB3P22-201ENST00000442010 TRAV7A0A075B6U4 112 aa7.86□□□□□ -1.15
HMGB3P22-201ENST00000442010 ACYP2P14621 99 aa7.81□□□□□ -1.16
HMGB3P22-201ENST00000442010 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
HMGB3P22-201ENST00000442010 SMIM20Q8N5G0 67 aa7.8□□□□□ -1.16
HMGB3P22-201ENST00000442010 KRTAP20-1Q3LI63 56 aa7.79□□□□□ -1.16
HMGB3P22-201ENST00000442010 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
HMGB3P22-201ENST00000442010 K7ERU9 68 aa7.76□□□□□ -1.17
HMGB3P22-201ENST00000442010 SPRR2FQ96RM1 72 aa7.75□□□□□ -1.17
HMGB3P22-201ENST00000442010 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
HMGB3P22-201ENST00000442010 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
HMGB3P22-201ENST00000442010 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
HMGB3P22-201ENST00000442010 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
HMGB3P22-201ENST00000442010 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
HMGB3P22-201ENST00000442010 SPRR2EP22531 72 aa7.64□□□□□ -1.19
HMGB3P22-201ENST00000442010 SPRR2BP35325 72 aa7.64□□□□□ -1.19
HMGB3P22-201ENST00000442010 SPRR2AP35326 72 aa7.64□□□□□ -1.19
HMGB3P22-201ENST00000442010 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
HMGB3P22-201ENST00000442010 CHKB-CPT1BH3BT56 60 aa7.62□□□□□ -1.19
HMGB3P22-201ENST00000442010 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P22-201ENST00000442010 KRTAP2-3P0C7H8 128 aa7.59□□□□□ -1.19
HMGB3P22-201ENST00000442010 SPANXA2-OT1Q8N9U9 137 aa7.59□□□□□ -1.19
HMGB3P22-201ENST00000442010 KRTAP2-4Q9BYR9 128 aa7.59□□□□□ -1.19
HMGB3P22-201ENST00000442010 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
HMGB3P22-201ENST00000442010 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
HMGB3P22-201ENST00000442010 SERP2Q8N6R1 65 aa7.53□□□□□ -1.2
HMGB3P22-201ENST00000442010 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
HMGB3P22-201ENST00000442010 SPRR2DP22532 72 aa7.38□□□□□ -1.23
HMGB3P22-201ENST00000442010 COA5Q86WW8 74 aa7.37□□□□□ -1.23
HMGB3P22-201ENST00000442010 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
HMGB3P22-201ENST00000442010 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
HMGB3P22-201ENST00000442010 COX7CP15954 63 aa7.28□□□□□ -1.24
HMGB3P22-201ENST00000442010 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
HMGB3P22-201ENST00000442010 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
HMGB3P22-201ENST00000442010 H7BZZ5 65 aa7.21□□□□□ -1.26
HMGB3P22-201ENST00000442010 SEC61GP60059 68 aa7.2□□□□□ -1.26
HMGB3P22-201ENST00000442010 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
HMGB3P22-201ENST00000442010 SERP1Q9Y6X1 66 aa7.2□□□□□ -1.26
HMGB3P22-201ENST00000442010 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
HMGB3P22-201ENST00000442010 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
HMGB3P22-201ENST00000442010 A0A0D9SG42 100 aa7.17□□□□□ -1.26
HMGB3P22-201ENST00000442010 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
HMGB3P22-201ENST00000442010 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
HMGB3P22-201ENST00000442010 A0A1B0GU33 70 aa7.13□□□□□ -1.27
HMGB3P22-201ENST00000442010 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
HMGB3P22-201ENST00000442010 MT1EP04732 61 aa7.06□□□□□ -1.28
HMGB3P22-201ENST00000442010 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
HMGB3P22-201ENST00000442010 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
HMGB3P22-201ENST00000442010 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
HMGB3P22-201ENST00000442010 A0A1B0GU69 56 aa6.96□□□□□ -1.3
HMGB3P22-201ENST00000442010 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
HMGB3P22-201ENST00000442010 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
HMGB3P22-201ENST00000442010 SMIM26A0A096LP01 95 aa6.92□□□□□ -1.3
HMGB3P22-201ENST00000442010 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
HMGB3P22-201ENST00000442010 A8MU10 97 aa6.9□□□□□ -1.3
HMGB3P22-201ENST00000442010 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
HMGB3P22-201ENST00000442010 MT1GP13640 62 aa6.83□□□□□ -1.32
HMGB3P22-201ENST00000442010 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
HMGB3P22-201ENST00000442010 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P22-201ENST00000442010 MT1LQ93083 61 aa6.74□□□□□ -1.33
HMGB3P22-201ENST00000442010 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
HMGB3P22-201ENST00000442010 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
HMGB3P22-201ENST00000442010 MT1MQ8N339 61 aa6.72□□□□□ -1.33
HMGB3P22-201ENST00000442010 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
HMGB3P22-201ENST00000442010 TNP1P09430 55 aa6.71□□□□□ -1.34
HMGB3P22-201ENST00000442010 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
HMGB3P22-201ENST00000442010 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
HMGB3P22-201ENST00000442010 TMEM258P61165 79 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms