RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FRYQ5TBA9 3013 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 MGAQ8IWI9 3026 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 GLI2P10070 1586 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 NRKQ7Z2Y5 1582 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 DIP2BQ9P265 1576 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 A0A1B0GV90 55 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 ZZEF1O43149 2961 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 GNG4P50150 75 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 SERF2P84101 59 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 LINC01590Q5TEZ4 76 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 ATP5EP2Q5VTU8 51 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 S100A16Q96FQ6 103 aaKnown RBP-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 SMCO4Q9NRQ5 59 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 HILPDAQ9Y5L2 63 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 IER3IP1Q9Y5U9 82 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 RGPD1P0DJD0 1748 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 MROH2AA6NES4 1674 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 SPENQ96T58 3664 aaKnown RBP-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 AKAP9Q99996 3911 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 PLECQ15149 4684 aaKnown RBP-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 REV3LO60673 3130 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 DUOX2Q9NRD8 1548 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 DCAF1Q9Y4B6 1507 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 H3BQ15 152 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 NDUFA1O15239 70 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 DLEU1O43261 78 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 NDUFA2O43678 99 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 GYPAP02724 150 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 PLNP26678 52 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 SNRPFP62306 86 aaKnown RBP-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 ADIRFQ15847 76 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 MED14O60244 1454 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 NRXN1Q9ULB1 1477 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 SPEGQ15772 3267 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 CSMD2Q7Z408 3487 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 NHSQ6T4R5 1651 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 ALS2Q96Q42 1657 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 FREM2Q5SZK8 3169 aa-0.31□□□□□ -2.46
PFDN4-202ENST00000441080 DIP2AQ14689 1571 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 RB1CC1Q8TDY2 1594 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 ARFGEF2Q9Y6D5 1785 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 EPRSP07814 1512 aaKnown RBP-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 AGLP35573 1532 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 LMTK2Q8IWU2 1503 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 CCDC88BA6NC98 1476 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 LINC01549A6NIU2 74 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 LINC00587B1AMM8 73 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 M0R143 59 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 MORN2Q502X0 79 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 LINC00643Q86TS7 51 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 KCNQ1DNQ9H478 68 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 ST20Q9HBF5 79 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 FRYLO94915 3013 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 CEP250Q9BV73 2442 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 TTC37Q6PGP7 1564 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 PKD1P98161 4303 aa-0.32□□□□□ -2.46
PFDN4-202ENST00000441080 UNC13AQ9UPW8 1703 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 EP400Q96L91 3159 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 CRYBG3Q68DQ2 2970 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 TRPM2O94759 1503 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 CPS1P31327 1500 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 ERICH3Q5RHP9 1530 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 DNAH7Q8WXX0 4024 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 DCHS1Q96JQ0 3298 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 MYO3AQ8NEV4 1616 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 ATP6V1G2-DDX39BF2Z307 99 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 H0YGX0 51 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 PKIAP61925 76 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 TDRG1Q3Y452 100 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 NCMAPQ5T1S8 102 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 DEFB124Q8NES8 71 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 S100A13Q99584 98 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 V9GYS6 101 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 DNAH1Q9P2D7 4330 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 UGGT1Q9NYU2 1555 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 DMDP11532 3685 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 CMYA5Q8N3K9 4069 aa-0.33□□□□□ -2.46
PFDN4-202ENST00000441080 ANK3Q12955 4377 aaKnown RBP-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 CCDC18Q5T9S5 1454 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 DNAH2Q9P225 4427 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 ABCA5Q8WWZ7 1642 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 MUC3AQ02505 3323 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 A0A087WWC5 75 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 CORTO00230 105 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 ABCA8O94911 1581 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 C14orf144Q96I85 54 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 CNTLNQ9NXG0 1405 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 ABCC3O15438 1527 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 SYCP2Q9BX26 1530 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 SPTBN5Q9NRC6 3674 aaKnown RBP-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 VPS13DQ5THJ4 4388 aa-0.34□□□□□ -2.46
PFDN4-202ENST00000441080 CLTCL1P53675 1640 aa-0.35□□□□□ -2.46
PFDN4-202ENST00000441080 WDFY4Q6ZS81 3184 aa-0.35□□□□□ -2.46
PFDN4-202ENST00000441080 USP34Q70CQ2 3546 aa-0.35□□□□□ -2.47
PFDN4-202ENST00000441080 TIAM1Q13009 1591 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms