RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 NOP10Q9NPE3 64 aaKnown RBP2.37□□□□□ -2.03
LINC00415-201ENST00000439079 TRGV2A0A075B6R0 118 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 I3L3M4 83 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 M0QY20 66 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 NDUFB1O75438 58 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 C3orf79P0CE67 100 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 FCER1GP30273 86 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 KRTAP10-6P60371 365 aaPredicted RBP2.36□□□□□ -2.03
LINC00415-201ENST00000439079 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 Q6ZQY7 126 aa2.36□□□□□ -2.03
LINC00415-201ENST00000439079 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
LINC00415-201ENST00000439079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.35□□□□□ -2.03
LINC00415-201ENST00000439079 TRBV7-4A0A0J9YYF1 115 aa2.35□□□□□ -2.03
LINC00415-201ENST00000439079 POLR2KP53803 58 aaKnown RBP2.35□□□□□ -2.03
LINC00415-201ENST00000439079 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
LINC00415-201ENST00000439079 LINC00208Q96KT6 92 aa2.34□□□□□ -2.03
LINC00415-201ENST00000439079 PLAC8Q9NZF1 115 aa2.34□□□□□ -2.03
LINC00415-201ENST00000439079 A0A087WVE0 104 aa2.33□□□□□ -2.04
LINC00415-201ENST00000439079 PLNP26678 52 aa2.33□□□□□ -2.04
LINC00415-201ENST00000439079 ATXN8Q156A1 80 aa2.33□□□□□ -2.04
LINC00415-201ENST00000439079 Q96NJ1 140 aa2.33□□□□□ -2.04
LINC00415-201ENST00000439079 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
LINC00415-201ENST00000439079 H0Y9P7 68 aa2.32□□□□□ -2.04
LINC00415-201ENST00000439079 RPL39P62891 51 aaKnown RBP2.32□□□□□ -2.04
LINC00415-201ENST00000439079 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
LINC00415-201ENST00000439079 IGKV4-1P06312 121 aa2.31□□□□□ -2.04
LINC00415-201ENST00000439079 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
LINC00415-201ENST00000439079 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
LINC00415-201ENST00000439079 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
LINC00415-201ENST00000439079 ACYP2P14621 99 aa2.3□□□□□ -2.04
LINC00415-201ENST00000439079 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
LINC00415-201ENST00000439079 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
LINC00415-201ENST00000439079 LINC00575Q6W349 94 aa2.27□□□□□ -2.05
LINC00415-201ENST00000439079 USH2AO75445 5202 aa2.27□□□□□ -2.05
LINC00415-201ENST00000439079 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
LINC00415-201ENST00000439079 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
LINC00415-201ENST00000439079 SMIM11BQ8TCY0 68 aa2.26□□□□□ -2.05
LINC00415-201ENST00000439079 LINC00472Q9H8W2 130 aa2.26□□□□□ -2.05
LINC00415-201ENST00000439079 CDKN2A-AS1Q9UH64 79 aa2.26□□□□□ -2.05
LINC00415-201ENST00000439079 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
LINC00415-201ENST00000439079 LINC00959A0A1B0GUT2 108 aa2.25□□□□□ -2.05
LINC00415-201ENST00000439079 ANGP03950 147 aaKnown RBP2.25□□□□□ -2.05
LINC00415-201ENST00000439079 COX6A2Q02221 97 aa2.25□□□□□ -2.05
LINC00415-201ENST00000439079 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
LINC00415-201ENST00000439079 NDUFA1O15239 70 aa2.24□□□□□ -2.05
LINC00415-201ENST00000439079 CLPSL2Q6UWE3 100 aa2.24□□□□□ -2.05
LINC00415-201ENST00000439079 ZCCHC13Q8WW36 166 aaKnown RBP2.24□□□□□ -2.05
LINC00415-201ENST00000439079 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
LINC00415-201ENST00000439079 SPINK6Q6UWN8 80 aa2.23□□□□□ -2.05
LINC00415-201ENST00000439079 PLAC4Q8WY50 150 aa2.23□□□□□ -2.05
LINC00415-201ENST00000439079 OBSCN-AS1Q96MR7 158 aa2.23□□□□□ -2.05
LINC00415-201ENST00000439079 TOMM7Q9P0U1 55 aa2.23□□□□□ -2.05
LINC00415-201ENST00000439079 NCR3O14931 201 aa2.22□□□□□ -2.05
LINC00415-201ENST00000439079 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
LINC00415-201ENST00000439079 Q8IZM0 81 aa2.22□□□□□ -2.05
LINC00415-201ENST00000439079 SPINK7P58062 85 aa2.21□□□□□ -2.06
LINC00415-201ENST00000439079 ENHOQ6UWT2 76 aa2.21□□□□□ -2.06
LINC00415-201ENST00000439079 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
LINC00415-201ENST00000439079 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
LINC00415-201ENST00000439079 LINC00158P58513 81 aa2.2□□□□□ -2.06
LINC00415-201ENST00000439079 NREPQ16612 68 aa2.2□□□□□ -2.06
LINC00415-201ENST00000439079 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
LINC00415-201ENST00000439079 Q6ZRX8 168 aa2.19□□□□□ -2.06
LINC00415-201ENST00000439079 LINC00308Q8TCZ7 52 aa2.19□□□□□ -2.06
LINC00415-201ENST00000439079 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
LINC00415-201ENST00000439079 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
LINC00415-201ENST00000439079 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
LINC00415-201ENST00000439079 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
LINC00415-201ENST00000439079 A0A1B0GU69 56 aa2.17□□□□□ -2.06
LINC00415-201ENST00000439079 A0A096LNI7 61 aa2.16□□□□□ -2.06
LINC00415-201ENST00000439079 C6orf48Q9UBA6 75 aa2.16□□□□□ -2.06
LINC00415-201ENST00000439079 MT1HP80294 61 aa2.15□□□□□ -2.07
LINC00415-201ENST00000439079 UBL5Q9BZL1 73 aa2.15□□□□□ -2.07
LINC00415-201ENST00000439079 H0YGX0 51 aa2.14□□□□□ -2.07
LINC00415-201ENST00000439079 RPL37P61927 97 aaKnown RBP2.14□□□□□ -2.07
LINC00415-201ENST00000439079 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
LINC00415-201ENST00000439079 COX7BP24311 80 aa2.11□□□□□ -2.07
LINC00415-201ENST00000439079 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
LINC00415-201ENST00000439079 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
LINC00415-201ENST00000439079 KCNQ1DNQ9H478 68 aa2.1□□□□□ -2.07
LINC00415-201ENST00000439079 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
LINC00415-201ENST00000439079 ETDCA0A1B0GVM5 59 aa2.09□□□□□ -2.07
LINC00415-201ENST00000439079 NEBP20929 6669 aa2.08□□□□□ -2.08
LINC00415-201ENST00000439079 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
LINC00415-201ENST00000439079 SPRR1AP35321 89 aa2.07□□□□□ -2.08
LINC00415-201ENST00000439079 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
LINC00415-201ENST00000439079 SSBP3-AS1Q7Z2R9 100 aa2.07□□□□□ -2.08
LINC00415-201ENST00000439079 DEFB105AQ8NG35 78 aa2.05□□□□□ -2.08
LINC00415-201ENST00000439079 IGLV5-48A0A075B6I7 105 aa2.04□□□□□ -2.08
LINC00415-201ENST00000439079 PRLHP81277 87 aa2.03□□□□□ -2.08
LINC00415-201ENST00000439079 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
LINC00415-201ENST00000439079 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
LINC00415-201ENST00000439079 SPRR1BP22528 89 aa2□□□□□ -2.09
LINC00415-201ENST00000439079 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
LINC00415-201ENST00000439079 M0R2T5 61 aa1.99□□□□□ -2.09
LINC00415-201ENST00000439079 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
LINC00415-201ENST00000439079 KMT2DO14686 5537 aa1.98□□□□□ -2.09
LINC00415-201ENST00000439079 CRIPTQ9P021 101 aa1.97□□□□□ -2.09
LINC00415-201ENST00000439079 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms