RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CYP4F30PQ9H0H9 118 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 NXT2Q9NPJ8 142 aaKnown RBP0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 TIMM8BQ9Y5J9 83 aaPredicted RBP0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 V9GYV3 84 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 H3BNG1 76 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 LEPROTL1O95214 131 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 SPART-AS1P0CW21 52 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 IFITM1P13164 125 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 CRIP1P50238 77 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 HSD52Q0P140 79 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 PMCHL1Q16048 86 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 FAM74A4Q5TZK3 123 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 TMEM263Q8WUH6 116 aaKnown RBP0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 Q96NJ1 140 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 ST20Q9HBF5 79 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 PLAC8Q9NZF1 115 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 PRO0255Q9UI72 69 aa0.55□□□□□ -2.32
TRAPPC13-204ENST00000438419 TRBV7-3A0A075B6L6 115 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 TRGV1A0A0A0MS02 117 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 LINC01546A6NGU7 62 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 D6R8Y8 96 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 H3BVH4 76 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 I3L3M4 83 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 M0QY20 66 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SPINK4O60575 86 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SMIM6P0DI80 62 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 HTN1P15515 57 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 PLNP26678 52 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 FCER1GP30273 86 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 IFI27P40305 119 aaPredicted RBP0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 POLR2KP53803 58 aaKnown RBP0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 CFAP126Q5VTH2 177 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SFTA2Q6UW10 78 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SPINK6Q6UWN8 80 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 C18orf32Q8TCD1 76 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SMIM2Q9BVW6 85 aa0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 NOP10Q9NPE3 64 aaKnown RBP0.54□□□□□ -2.32
TRAPPC13-204ENST00000438419 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 TRBV25-1A0A075B6N4 114 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 IGIPA6NJ69 53 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 TMEM262E9PQX1 116 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 F8VRH5 84 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 SYS1-DBNDD2H3BUS1 97 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 MGPP08493 103 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 DEFB130BP0DP73 79 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 DEFB130AP0DP74 79 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 UBE2D3P61077 147 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 UBE2D2P62837 147 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 WFDC2Q14508 124 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 Q5VV11 94 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 GTF2H5Q6ZYL4 71 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 PMCHL2Q9BQD1 86 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 VAMP8Q9BV40 100 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 LINC00474Q9P2X8 69 aa0.53□□□□□ -2.32
TRAPPC13-204ENST00000438419 A0A096LPF7 62 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 MYMXA0A1B0GTQ4 84 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 M0R143 59 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPINK8P0C7L1 97 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 C3orf79P0CE67 100 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 IGLC3P0DOY3 106 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 ATP5EP56381 51 aaPredicted RBP0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 DEFB1P60022 68 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 KRTDAPP60985 99 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 COX17Q14061 63 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 PYY3Q5JQD4 70 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 LINC01556Q5JQF7 62 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 TMEM170BQ5T4T1 132 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 RPL39LQ96EH5 51 aaKnown RBP0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 AMELXQ99217 191 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 PRR15LQ9BU68 103 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 CDC42SE2Q9NRR3 84 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 HIGD1BQ9P298 99 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 UQCR10Q9UDW1 63 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 UBE2D4Q9Y2X8 147 aa0.52□□□□□ -2.33
TRAPPC13-204ENST00000438419 GVQW2A0A096LPI5 108 aaPredicted RBP0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 LINC00959A0A1B0GUT2 108 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 NDUFA1O15239 70 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 COX6CP09669 75 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 SMIM13P0DJ93 91 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 COX8AP10176 69 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 RPL39P62891 51 aaKnown RBP0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 COL5A1-AS1Q5SY13 56 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 Q8IZM0 81 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 CDKN2A-AS1Q9UH64 79 aa0.51□□□□□ -2.33
TRAPPC13-204ENST00000438419 ZNF815PA8K554 130 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 H0YGX0 51 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 LINC00158P58513 81 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPAG11BQ08648 103 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 BVES-AS1Q5T3Y7 98 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 ENHOQ6UWT2 76 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 KRTAP8-1Q8IUC2 63 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 LINC00308Q8TCZ7 52 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 TOMM7Q9P0U1 55 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 PRO1854Q9UHT4 67 aa0.5□□□□□ -2.33
TRAPPC13-204ENST00000438419 ACYP2P14621 99 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 COX6A2Q02221 97 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 WFDC10BQ8IUB3 73 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 MUSTN1Q8IVN3 82 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 SMIM11BQ8TCY0 68 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms