RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ATXN8Q156A1 80 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 KLK9Q2XQG4 91 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 H1FX-AS1Q4G0G2 97 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 TTTY10Q9BZA0 68 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 FXYD6Q9H0Q3 95 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 CMC2Q9NRP2 79 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 TRRAPQ9Y4A5 3859 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 DSTQ03001 7570 aaKnown RBP0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 DNAH7Q8WXX0 4024 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 A0A087WWC5 75 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 DEFB108AA8MXU0 73 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 H3BUX3 64 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 TFF3Q07654 80 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 MINOS1Q5TGZ0 78 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 ENHOQ6UWT2 76 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 DEFB108BQ8NET1 73 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 DNAH3Q8TD57 4116 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 FAT2Q9NYQ8 4349 aa0.53□□□□□ -2.32
HMGB1P9-201ENST00000429856 H3BSH0 61 aa0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 H3BUA1 57 aa0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 NDUFA3O95167 84 aa0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 C3orf79P0CE67 100 aa0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 SMR3AQ99954 134 aa0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 DYNC2H1Q8NCM8 4307 aaKnown RBP0.52□□□□□ -2.33
HMGB1P9-201ENST00000429856 LYNX1G3V0Z9 82 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 KMT2DO14686 5537 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 RPS27P42677 84 aaKnown RBP0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 SNRPGP62308 76 aaKnown RBP0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 PRCDQ00LT1 54 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 TOMM5Q8N4H5 51 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 S100ZQ8WXG8 99 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 KAAG1Q9UBP8 84 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 CDKN2A-AS1Q9UH64 79 aa0.51□□□□□ -2.33
HMGB1P9-201ENST00000429856 HECTD4Q9Y4D8 3996 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 DNAH1Q9P2D7 4330 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB136Q30KP8 78 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 RPL39P5Q59GN2 51 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 LINC01590Q5TEZ4 76 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 COX6B2Q6YFQ2 88 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 TMEM167AQ8TBQ9 72 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 ARHGAP5-AS1Q96IT6 56 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 DNAH9Q9NYC9 4486 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 LYSTQ99698 3801 aa0.5□□□□□ -2.33
HMGB1P9-201ENST00000429856 STARD9Q9P2P6 4700 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 SACSQ9NZJ4 4579 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 DNAH11Q96DT5 4516 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 SPINK4O60575 86 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 SPINK1P00995 79 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 APELAP0DMC3 54 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 IAPPP10997 89 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 HTN3P15516 51 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB135Q30KP9 77 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 LEAP2Q969E1 77 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 NMES1Q9C002 83 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 TMEM167BQ9NRX6 74 aa0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 HRNRQ86YZ3 2850 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P9-201ENST00000429856 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 PKHD1P08F94 4074 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB131BA0A096LNP1 70 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 LINC01549A6NIU2 74 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 SNRPGP15A8MWD9 76 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 SPART-AS1P0CW21 52 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 HTN1P15515 57 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB131AP59861 70 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 WFDC13Q8IUB5 93 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 RHPN1-AS1Q9BWJ2 59 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 KCNQ1DNQ9H478 68 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 TIMM8BQ9Y5J9 83 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
HMGB1P9-201ENST00000429856 DNAH5Q8TE73 4624 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 PKHD1L1Q86WI1 4243 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 K7EIM0 57 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 SFTA3P0C7M3 94 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB130BP0DP73 79 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 DEFB130AP0DP74 79 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 FCER1GP30273 86 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 SERF2P84101 59 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 SRRM2Q9UQ35 2752 aaKnown RBP0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 LRP1BQ9NZR2 4599 aa0.47□□□□□ -2.33
HMGB1P9-201ENST00000429856 MUC12Q9UKN1 5478 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 VPS13DQ5THJ4 4388 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 A0A096LPF7 62 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 DEFB4AO15263 64 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 WT1-ASQ06250 92 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 DEFB114Q30KQ6 69 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 NOP10Q9NPE3 64 aaKnown RBP0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 USH2AO75445 5202 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 DNAH2Q9P225 4427 aa0.46□□□□□ -2.34
HMGB1P9-201ENST00000429856 APOBP04114 4563 aaKnown RBP0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 DNAH8Q96JB1 4490 aa0.45□□□□□ -2.34
HMGB1P9-201ENST00000429856 H3BNG1 76 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms