RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRR9Q5T870 116 aa2.48□□□□□ -2.01
HMGB3P5-201ENST00000428894 Q6ZQT0 140 aa2.48□□□□□ -2.01
HMGB3P5-201ENST00000428894 Q8TAT8 98 aa2.48□□□□□ -2.01
HMGB3P5-201ENST00000428894 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
HMGB3P5-201ENST00000428894 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 Q8NDZ9 215 aa2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 PLAC8Q9NZF1 115 aa2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 PSORS1C2Q9UIG4 136 aa2.47□□□□□ -2.01
HMGB3P5-201ENST00000428894 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
HMGB3P5-201ENST00000428894 H3BPC8 53 aa2.46□□□□□ -2.02
HMGB3P5-201ENST00000428894 CRIP1P50238 77 aa2.46□□□□□ -2.02
HMGB3P5-201ENST00000428894 SPACA4Q8TDM5 124 aa2.46□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGLV1-50A0A075B6I6 118 aa2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 A0A1W2PNM2 257 aa2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGKV2-29A2NJV5 120 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 DEFB116Q30KQ4 102 aa2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGKV4-1P06312 121 aa2.44□□□□□ -2.02
HMGB3P5-201ENST00000428894 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
HMGB3P5-201ENST00000428894 SMIM11BQ8TCY0 68 aa2.44□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGLV10-54A0A075B6I4 117 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 A0A087WSZ3 146 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 SPINK7P58062 85 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 COX6A2Q02221 97 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 NTM-AS1Q6ZSK4 140 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 COA5Q86WW8 74 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 RPL39LQ96EH5 51 aaKnown RBP2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 DMAC1Q96GE9 116 aa2.43□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGKV2-24A0A0C4DH68 120 aa2.42□□□□□ -2.02
HMGB3P5-201ENST00000428894 UQCR11O14957 56 aa2.42□□□□□ -2.02
HMGB3P5-201ENST00000428894 RNASE3P12724 160 aaKnown RBP2.42□□□□□ -2.02
HMGB3P5-201ENST00000428894 RPL39P62891 51 aaKnown RBP2.42□□□□□ -2.02
HMGB3P5-201ENST00000428894 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
HMGB3P5-201ENST00000428894 C1orf137Q5JT78 98 aa2.41□□□□□ -2.02
HMGB3P5-201ENST00000428894 KRTAP26-1Q6PEX3 210 aa2.41□□□□□ -2.02
HMGB3P5-201ENST00000428894 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
HMGB3P5-201ENST00000428894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P5-201ENST00000428894 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.03
HMGB3P5-201ENST00000428894 Q5W150 140 aa2.4□□□□□ -2.03
HMGB3P5-201ENST00000428894 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
HMGB3P5-201ENST00000428894 KCNQ1DNQ9H478 68 aa2.4□□□□□ -2.03
HMGB3P5-201ENST00000428894 COX7BP24311 80 aa2.39□□□□□ -2.03
HMGB3P5-201ENST00000428894 A0A096LNI7 61 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 P0C880 135 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 LINC00158P58513 81 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
HMGB3P5-201ENST00000428894 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
HMGB3P5-201ENST00000428894 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
HMGB3P5-201ENST00000428894 C15orf56Q8N910 161 aa2.37□□□□□ -2.03
HMGB3P5-201ENST00000428894 GVQW2A0A096LPI5 108 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P5-201ENST00000428894 A0A1B0GU69 56 aa2.36□□□□□ -2.03
HMGB3P5-201ENST00000428894 COX17Q14061 63 aa2.35□□□□□ -2.03
HMGB3P5-201ENST00000428894 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
HMGB3P5-201ENST00000428894 Q6ZQY7 126 aa2.35□□□□□ -2.03
HMGB3P5-201ENST00000428894 CDKN2A-AS1Q9UH64 79 aa2.35□□□□□ -2.03
HMGB3P5-201ENST00000428894 IGKV3OR2-268A0A0C4DH90 116 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 A8MUU9 505 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 LINC00575Q6W349 94 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.03
HMGB3P5-201ENST00000428894 LINC00959A0A1B0GUT2 108 aa2.33□□□□□ -2.04
HMGB3P5-201ENST00000428894 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
HMGB3P5-201ENST00000428894 SPRR4Q96PI1 79 aa2.33□□□□□ -2.04
HMGB3P5-201ENST00000428894 M0QY20 66 aa2.32□□□□□ -2.04
HMGB3P5-201ENST00000428894 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HMGB3P5-201ENST00000428894 Q8IZM0 81 aa2.3□□□□□ -2.04
HMGB3P5-201ENST00000428894 TOMM7Q9P0U1 55 aa2.3□□□□□ -2.04
HMGB3P5-201ENST00000428894 LINC00304Q8N9R0 145 aa2.28□□□□□ -2.04
HMGB3P5-201ENST00000428894 ACYP2P14621 99 aa2.27□□□□□ -2.05
HMGB3P5-201ENST00000428894 K7EQZ3 153 aa2.26□□□□□ -2.05
HMGB3P5-201ENST00000428894 HRES1P13985 223 aa2.26□□□□□ -2.05
HMGB3P5-201ENST00000428894 WFDC13Q8IUB5 93 aa2.26□□□□□ -2.05
HMGB3P5-201ENST00000428894 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
HMGB3P5-201ENST00000428894 PCOTHQ58A44 107 aa2.25□□□□□ -2.05
HMGB3P5-201ENST00000428894 SSBP3-AS1Q7Z2R9 100 aa2.25□□□□□ -2.05
HMGB3P5-201ENST00000428894 TP53AIP1Q9HCN2 124 aa2.25□□□□□ -2.05
HMGB3P5-201ENST00000428894 M0R2T5 61 aa2.24□□□□□ -2.05
HMGB3P5-201ENST00000428894 LINC00472Q9H8W2 130 aa2.24□□□□□ -2.05
HMGB3P5-201ENST00000428894 A0A1B0GU33 70 aa2.23□□□□□ -2.05
HMGB3P5-201ENST00000428894 MT1HP80294 61 aa2.23□□□□□ -2.05
HMGB3P5-201ENST00000428894 UNQ6190/PRO20217Q6UXQ8 127 aa2.23□□□□□ -2.05
HMGB3P5-201ENST00000428894 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
HMGB3P5-201ENST00000428894 C6orf48Q9UBA6 75 aa2.23□□□□□ -2.05
HMGB3P5-201ENST00000428894 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
HMGB3P5-201ENST00000428894 Q96NJ1 140 aa2.22□□□□□ -2.05
HMGB3P5-201ENST00000428894 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
HMGB3P5-201ENST00000428894 SPINK1P00995 79 aa2.2□□□□□ -2.06
HMGB3P5-201ENST00000428894 IGLV6-57P01721 117 aa2.2□□□□□ -2.06
HMGB3P5-201ENST00000428894 IGLV5-48A0A075B6I7 105 aa2.19□□□□□ -2.06
HMGB3P5-201ENST00000428894 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
HMGB3P5-201ENST00000428894 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms