RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 A0A087WVE0 104 aa12.14□□□□□ -0.47
LMO1-202ENST00000428101 KLKP1Q107X0 134 aa12.14□□□□□ -0.47
LMO1-202ENST00000428101 TRAV22A0A0B4J277 110 aa12.13□□□□□ -0.47
LMO1-202ENST00000428101 UQCRQO14949 82 aa12.09□□□□□ -0.47
LMO1-202ENST00000428101 LOC101927531A0A1B0GV80 90 aa12.04□□□□□ -0.48
LMO1-202ENST00000428101 KRTAP10-5P60370 271 aa12.03□□□□□ -0.48
LMO1-202ENST00000428101 H0Y9P7 68 aa12□□□□□ -0.49
LMO1-202ENST00000428101 ATOX1O00244 68 aa11.99□□□□□ -0.49
LMO1-202ENST00000428101 CRIPTQ9P021 101 aa11.93□□□□□ -0.5
LMO1-202ENST00000428101 OCR1Q9BZK8 76 aa11.9□□□□□ -0.5
LMO1-202ENST00000428101 K7ERU9 68 aa11.89□□□□□ -0.51
LMO1-202ENST00000428101 MUC12Q9UKN1 5478 aa11.88□□□□□ -0.51
LMO1-202ENST00000428101 IMUPQ9GZP8 106 aa11.87□□□□□ -0.51
LMO1-202ENST00000428101 NEBP20929 6669 aa11.87□□□□□ -0.51
LMO1-202ENST00000428101 MP68P56378 58 aa11.83□□□□□ -0.52
LMO1-202ENST00000428101 LINC00208Q96KT6 92 aa11.83□□□□□ -0.52
LMO1-202ENST00000428101 NDUFC1O43677 76 aa11.81□□□□□ -0.52
LMO1-202ENST00000428101 SCGB1A1P11684 91 aa11.8□□□□□ -0.52
LMO1-202ENST00000428101 H0YAA0 97 aa11.79□□□□□ -0.52
LMO1-202ENST00000428101 MT-ATP8P03928 68 aa11.75□□□□□ -0.53
LMO1-202ENST00000428101 KRTAP5-9P26371 169 aa11.72□□□□□ -0.53
LMO1-202ENST00000428101 H3BPC8 53 aa11.71□□□□□ -0.53
LMO1-202ENST00000428101 A8MUN3 132 aa11.69□□□□□ -0.54
LMO1-202ENST00000428101 ADM2Q7Z4H4 148 aa11.66□□□□□ -0.54
LMO1-202ENST00000428101 KMT2DO14686 5537 aa11.59□□□□□ -0.55
LMO1-202ENST00000428101 SMIM20Q8N5G0 67 aa11.56□□□□□ -0.56
LMO1-202ENST00000428101 TRAV7A0A075B6U4 112 aa11.52□□□□□ -0.57
LMO1-202ENST00000428101 KRTAP20-1Q3LI63 56 aa11.52□□□□□ -0.57
LMO1-202ENST00000428101 MDN1Q9NU22 5596 aa11.48□□□□□ -0.57
LMO1-202ENST00000428101 MT1XP80297 61 aa11.47□□□□□ -0.57
LMO1-202ENST00000428101 PRO2289Q9P1D8 64 aa11.43□□□□□ -0.58
LMO1-202ENST00000428101 P0C880 135 aa11.4□□□□□ -0.58
LMO1-202ENST00000428101 DMAC1Q96GE9 116 aa11.4□□□□□ -0.58
LMO1-202ENST00000428101 PLAC4Q8WY50 150 aa11.38□□□□□ -0.59
LMO1-202ENST00000428101 R4GN34 69 aa11.36□□□□□ -0.59
LMO1-202ENST00000428101 SPRR2FQ96RM1 72 aa11.3□□□□□ -0.6
LMO1-202ENST00000428101 C20orf197Q8N268 126 aa11.29□□□□□ -0.6
LMO1-202ENST00000428101 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
LMO1-202ENST00000428101 M0QZ58 72 aa11.27□□□□□ -0.61
LMO1-202ENST00000428101 SERP2Q8N6R1 65 aa11.24□□□□□ -0.61
LMO1-202ENST00000428101 SNURFQ9Y675 71 aa11.24□□□□□ -0.61
LMO1-202ENST00000428101 ACYP2P14621 99 aa11.21□□□□□ -0.61
LMO1-202ENST00000428101 KRTAP12-2P59991 146 aa11.21□□□□□ -0.61
LMO1-202ENST00000428101 KRTAP8-1Q8IUC2 63 aa11.19□□□□□ -0.62
LMO1-202ENST00000428101 KRTAP2-3P0C7H8 128 aa11.18□□□□□ -0.62
LMO1-202ENST00000428101 SPRR2EP22531 72 aa11.18□□□□□ -0.62
LMO1-202ENST00000428101 SPRR2BP35325 72 aa11.18□□□□□ -0.62
LMO1-202ENST00000428101 SPRR2AP35326 72 aa11.18□□□□□ -0.62
LMO1-202ENST00000428101 KRTAP2-4Q9BYR9 128 aa11.18□□□□□ -0.62
LMO1-202ENST00000428101 LINC01554Q52M75 96 aa11.11□□□□□ -0.63
LMO1-202ENST00000428101 SPANXA2-OT1Q8N9U9 137 aa11.07□□□□□ -0.64
LMO1-202ENST00000428101 KRTAP4-8A0A0G2JLE6 195 aa11.05□□□□□ -0.64
LMO1-202ENST00000428101 KRTAP4-8Q9BYQ9 185 aa11.05□□□□□ -0.64
LMO1-202ENST00000428101 LCE1AQ5T7P2 110 aa11.04□□□□□ -0.64
LMO1-202ENST00000428101 SPTSSBQ8NFR3 76 aa11.03□□□□□ -0.64
LMO1-202ENST00000428101 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
LMO1-202ENST00000428101 COX7CP15954 63 aa10.98□□□□□ -0.65
LMO1-202ENST00000428101 KRTAP10-7P60409 375 aaPredicted RBP10.95□□□□□ -0.66
LMO1-202ENST00000428101 KRTAP10-12P60413 245 aa10.88□□□□□ -0.67
LMO1-202ENST00000428101 KRTAP2-2Q9BYT5 123 aa10.82□□□□□ -0.68
LMO1-202ENST00000428101 KRTAP2-1Q9BYU5 128 aa10.82□□□□□ -0.68
LMO1-202ENST00000428101 SPRR2DP22532 72 aa10.81□□□□□ -0.68
LMO1-202ENST00000428101 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
LMO1-202ENST00000428101 H7BZZ5 65 aa10.74□□□□□ -0.69
LMO1-202ENST00000428101 COA5Q86WW8 74 aa10.73□□□□□ -0.69
LMO1-202ENST00000428101 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
LMO1-202ENST00000428101 KRTAP13-4Q3LI77 160 aa10.58□□□□□ -0.72
LMO1-202ENST00000428101 LCE3BQ5TA77 95 aa10.54□□□□□ -0.72
LMO1-202ENST00000428101 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
LMO1-202ENST00000428101 SEC61GP60059 68 aa10.46□□□□□ -0.73
LMO1-202ENST00000428101 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
LMO1-202ENST00000428101 CAMK2N1Q7Z7J9 78 aa10.39□□□□□ -0.75
LMO1-202ENST00000428101 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
LMO1-202ENST00000428101 KRTAP19-7Q3SYF9 63 aa10.26□□□□□ -0.77
LMO1-202ENST00000428101 A0A1B0GU33 70 aa10.23□□□□□ -0.77
LMO1-202ENST00000428101 A0A1B0GU69 56 aa10.19□□□□□ -0.78
LMO1-202ENST00000428101 LCE5AQ5TCM9 118 aa10.19□□□□□ -0.78
LMO1-202ENST00000428101 A0A0D9SG42 100 aa10.18□□□□□ -0.78
LMO1-202ENST00000428101 MT1EP04732 61 aa10.17□□□□□ -0.78
LMO1-202ENST00000428101 TMEM258P61165 79 aa10.16□□□□□ -0.78
LMO1-202ENST00000428101 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
LMO1-202ENST00000428101 KRTAP19-3Q7Z4W3 81 aa10.12□□□□□ -0.79
LMO1-202ENST00000428101 DSTQ03001 7570 aaKnown RBP10.07□□□□□ -0.8
LMO1-202ENST00000428101 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
LMO1-202ENST00000428101 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
LMO1-202ENST00000428101 PRR15LQ9BU68 103 aa9.99□□□□□ -0.81
LMO1-202ENST00000428101 SMIM26A0A096LP01 95 aa9.95□□□□□ -0.82
LMO1-202ENST00000428101 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
LMO1-202ENST00000428101 KRTAP19-5Q3LI72 72 aa9.93□□□□□ -0.82
LMO1-202ENST00000428101 KRTAP4-9Q9BYQ8 210 aa9.88□□□□□ -0.83
LMO1-202ENST00000428101 MT1GP13640 62 aa9.85□□□□□ -0.83
LMO1-202ENST00000428101 A8MU10 97 aa9.84□□□□□ -0.83
LMO1-202ENST00000428101 PP632Q6XCG6 107 aa9.73□□□□□ -0.85
LMO1-202ENST00000428101 MT1MQ8N339 61 aa9.69□□□□□ -0.86
LMO1-202ENST00000428101 MT1LQ93083 61 aa9.69□□□□□ -0.86
LMO1-202ENST00000428101 GPR98Q8WXG9 6306 aa9.68□□□□□ -0.86
LMO1-202ENST00000428101 UQCR11O14957 56 aa9.66□□□□□ -0.86
LMO1-202ENST00000428101 LCE1DQ5T752 114 aa9.63□□□□□ -0.87
LMO1-202ENST00000428101 LCE3AQ5TA76 89 aa9.6□□□□□ -0.87
LMO1-202ENST00000428101 C10orf95Q9H7T3 257 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms