RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
TOP2A-201ENST00000423485 C1orf64Q8NEQ6 169 aa2.12□□□□□ -2.07
TOP2A-201ENST00000423485 DMBT1Q9UGM3 2413 aaPredicted RBP2.12□□□□□ -2.07
TOP2A-201ENST00000423485 PSPHP1O15172 72 aa2.11□□□□□ -2.07
TOP2A-201ENST00000423485 TTTY13Q9BZ97 58 aa2.11□□□□□ -2.07
TOP2A-201ENST00000423485 C9orf129Q5T035 196 aaKnown RBP2.11□□□□□ -2.07
TOP2A-201ENST00000423485 H0Y9P7 68 aa2.1□□□□□ -2.07
TOP2A-201ENST00000423485 A0A1B0GVX0 72 aa2.1□□□□□ -2.07
TOP2A-201ENST00000423485 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
TOP2A-201ENST00000423485 GIG44P09565 113 aaPredicted RBP2.1□□□□□ -2.07
TOP2A-201ENST00000423485 LINC00208Q96KT6 92 aa2.09□□□□□ -2.07
TOP2A-201ENST00000423485 A0A1B0GVY2 172 aa2.08□□□□□ -2.08
TOP2A-201ENST00000423485 SMIM29Q86T20 159 aa2.08□□□□□ -2.08
TOP2A-201ENST00000423485 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
TOP2A-201ENST00000423485 RPL37P61927 97 aaKnown RBP2.08□□□□□ -2.08
TOP2A-201ENST00000423485 M0QZ58 72 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 H1FX-AS1Q4G0G2 97 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 KRTAP9-6A0A140TA67 174 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 SPRR1BP22528 89 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 SPINK7P58062 85 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 KRTAP1-5Q9BYS1 174 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 C8orf17Q9NRJ1 99 aa2.07□□□□□ -2.08
TOP2A-201ENST00000423485 Q5VV11 94 aa2.06□□□□□ -2.08
TOP2A-201ENST00000423485 A0A0G2JQZ4 141 aa2.06□□□□□ -2.08
TOP2A-201ENST00000423485 Q8N9P0 234 aaPredicted RBP2.06□□□□□ -2.08
TOP2A-201ENST00000423485 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
TOP2A-201ENST00000423485 A0A1B0GU69 56 aa2.05□□□□□ -2.08
TOP2A-201ENST00000423485 Q8N377 158 aa2.04□□□□□ -2.08
TOP2A-201ENST00000423485 KRTAP11-1Q8IUC1 163 aa2.04□□□□□ -2.08
TOP2A-201ENST00000423485 KRTAP7-1Q8IUC3 87 aa2.04□□□□□ -2.08
TOP2A-201ENST00000423485 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
TOP2A-201ENST00000423485 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.09
TOP2A-201ENST00000423485 A0A0D9SG42 100 aa2.02□□□□□ -2.09
TOP2A-201ENST00000423485 SPRR1AP35321 89 aa2.02□□□□□ -2.09
TOP2A-201ENST00000423485 KRTAP10-8P60410 259 aa2.02□□□□□ -2.09
TOP2A-201ENST00000423485 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
TOP2A-201ENST00000423485 P0C880 135 aa2.02□□□□□ -2.09
TOP2A-201ENST00000423485 UQCR11O14957 56 aa2.01□□□□□ -2.09
TOP2A-201ENST00000423485 A0A087WVE0 104 aa2.01□□□□□ -2.09
TOP2A-201ENST00000423485 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
TOP2A-201ENST00000423485 A6NED7 52 aa1.98□□□□□ -2.09
TOP2A-201ENST00000423485 ADM2Q7Z4H4 148 aa1.97□□□□□ -2.09
TOP2A-201ENST00000423485 MPLKIPQ8TAP9 179 aa1.97□□□□□ -2.09
TOP2A-201ENST00000423485 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
TOP2A-201ENST00000423485 SNURFQ9Y675 71 aa1.97□□□□□ -2.09
TOP2A-201ENST00000423485 COA5Q86WW8 74 aa1.97□□□□□ -2.09
TOP2A-201ENST00000423485 A8MUU9 505 aa1.96□□□□□ -2.1
TOP2A-201ENST00000423485 XP32Q5T750 250 aa1.96□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP4-16G5E9R7 235 aaPredicted RBP1.95□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP4-8A0A0G2JLE6 195 aa1.94□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
TOP2A-201ENST00000423485 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
TOP2A-201ENST00000423485 A8MU10 97 aa1.93□□□□□ -2.1
TOP2A-201ENST00000423485 H3BS24 57 aa1.93□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP9-3Q9BYQ3 159 aa1.93□□□□□ -2.1
TOP2A-201ENST00000423485 TNP1P09430 55 aa1.92□□□□□ -2.1
TOP2A-201ENST00000423485 LINC00472Q9H8W2 130 aa1.91□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP16-1A8MUX0 517 aa1.91□□□□□ -2.1
TOP2A-201ENST00000423485 ROMO1P60602 79 aa1.91□□□□□ -2.1
TOP2A-201ENST00000423485 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.1
TOP2A-201ENST00000423485 KRTAP13-3Q3SY46 172 aa1.9□□□□□ -2.11
TOP2A-201ENST00000423485 MMP24-AS1A0A0U1RRL7 71 aa1.9□□□□□ -2.11
TOP2A-201ENST00000423485 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
TOP2A-201ENST00000423485 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
TOP2A-201ENST00000423485 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
TOP2A-201ENST00000423485 A0A1B0GU33 70 aa1.87□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP13-2Q52LG2 175 aa1.87□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP4-7Q9BYR0 210 aa1.87□□□□□ -2.11
TOP2A-201ENST00000423485 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
TOP2A-201ENST00000423485 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
TOP2A-201ENST00000423485 KRTAP4-5Q9BYR2 181 aa1.84□□□□□ -2.11
TOP2A-201ENST00000423485 H0YAA0 97 aa1.81□□□□□ -2.12
TOP2A-201ENST00000423485 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
TOP2A-201ENST00000423485 KRTAP23-1A1A580 65 aa1.81□□□□□ -2.12
TOP2A-201ENST00000423485 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
TOP2A-201ENST00000423485 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
TOP2A-201ENST00000423485 KRTAP1-4P0C5Y4 121 aa1.79□□□□□ -2.12
TOP2A-201ENST00000423485 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.13
TOP2A-201ENST00000423485 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
TOP2A-201ENST00000423485 SPRR2EP22531 72 aa1.77□□□□□ -2.13
TOP2A-201ENST00000423485 SPRR2BP35325 72 aa1.77□□□□□ -2.13
TOP2A-201ENST00000423485 SPRR2AP35326 72 aa1.77□□□□□ -2.13
TOP2A-201ENST00000423485 A0A0A0MQY5 61 aa1.76□□□□□ -2.13
TOP2A-201ENST00000423485 KRTAP15-1Q3LI76 137 aa1.75□□□□□ -2.13
TOP2A-201ENST00000423485 MT1HL1P0DM35 61 aa1.74□□□□□ -2.13
TOP2A-201ENST00000423485 SPRR2DP22532 72 aa1.74□□□□□ -2.13
TOP2A-201ENST00000423485 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
TOP2A-201ENST00000423485 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
TOP2A-201ENST00000423485 INE1O15225 51 aa1.72□□□□□ -2.13
TOP2A-201ENST00000423485 LCE1DQ5T752 114 aa1.72□□□□□ -2.13
TOP2A-201ENST00000423485 LCE5AQ5TCM9 118 aa1.71□□□□□ -2.14
TOP2A-201ENST00000423485 PRAC1Q96KF2 57 aa1.7□□□□□ -2.14
TOP2A-201ENST00000423485 KRTAP10-6P60371 365 aaPredicted RBP1.69□□□□□ -2.14
TOP2A-201ENST00000423485 KRTAP3-1Q9BYR8 98 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms