RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
TNFAIP3-202ENST00000420009 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
TNFAIP3-202ENST00000420009 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
TNFAIP3-202ENST00000420009 A0A1B0GW54 56 aa4.55□□□□□ -1.68
TNFAIP3-202ENST00000420009 FAM236AA0A1B0GUQ0 79 aa4.54□□□□□ -1.68
TNFAIP3-202ENST00000420009 FAM236BA0A1B0GV22 79 aa4.54□□□□□ -1.68
TNFAIP3-202ENST00000420009 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
TNFAIP3-202ENST00000420009 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TNFAIP3-202ENST00000420009 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 TMEM254Q8TBM7 123 aa4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
TNFAIP3-202ENST00000420009 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
TNFAIP3-202ENST00000420009 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
TNFAIP3-202ENST00000420009 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
TNFAIP3-202ENST00000420009 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
TNFAIP3-202ENST00000420009 NREPQ16612 68 aa4.5□□□□□ -1.69
TNFAIP3-202ENST00000420009 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
TNFAIP3-202ENST00000420009 C4orf26Q17RF5 130 aa4.48□□□□□ -1.69
TNFAIP3-202ENST00000420009 Q5W150 140 aa4.48□□□□□ -1.69
TNFAIP3-202ENST00000420009 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
TNFAIP3-202ENST00000420009 CXCL6P80162 114 aa4.47□□□□□ -1.69
TNFAIP3-202ENST00000420009 NDUFS5O43920 106 aa4.46□□□□□ -1.7
TNFAIP3-202ENST00000420009 SPRR2EP22531 72 aa4.46□□□□□ -1.7
TNFAIP3-202ENST00000420009 SPRR2BP35325 72 aa4.46□□□□□ -1.7
TNFAIP3-202ENST00000420009 SPRR2AP35326 72 aa4.46□□□□□ -1.7
TNFAIP3-202ENST00000420009 BPY2O14599 106 aa4.45□□□□□ -1.7
TNFAIP3-202ENST00000420009 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
TNFAIP3-202ENST00000420009 IMUPQ9GZP8 106 aa4.45□□□□□ -1.7
TNFAIP3-202ENST00000420009 A0A087WVE0 104 aa4.44□□□□□ -1.7
TNFAIP3-202ENST00000420009 K7EQZ3 153 aa4.44□□□□□ -1.7
TNFAIP3-202ENST00000420009 KLKP1Q107X0 134 aa4.44□□□□□ -1.7
TNFAIP3-202ENST00000420009 Q8N9L7 120 aa4.44□□□□□ -1.7
TNFAIP3-202ENST00000420009 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
TNFAIP3-202ENST00000420009 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
TNFAIP3-202ENST00000420009 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
TNFAIP3-202ENST00000420009 S4R3F8 94 aa4.43□□□□□ -1.7
TNFAIP3-202ENST00000420009 HIST1H4AP62805 103 aaKnown RBP4.42□□□□□ -1.7
TNFAIP3-202ENST00000420009 LCA10Q71F78 164 aa4.41□□□□□ -1.7
TNFAIP3-202ENST00000420009 SCGB1A1P11684 91 aa4.4□□□□□ -1.71
TNFAIP3-202ENST00000420009 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
TNFAIP3-202ENST00000420009 HCG22E2RYF7 251 aa4.35□□□□□ -1.71
TNFAIP3-202ENST00000420009 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
TNFAIP3-202ENST00000420009 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
TNFAIP3-202ENST00000420009 ATOX1O00244 68 aa4.33□□□□□ -1.72
TNFAIP3-202ENST00000420009 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
TNFAIP3-202ENST00000420009 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
TNFAIP3-202ENST00000420009 SPRR2DP22532 72 aa4.31□□□□□ -1.72
TNFAIP3-202ENST00000420009 MT1XP80297 61 aa4.3□□□□□ -1.72
TNFAIP3-202ENST00000420009 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
TNFAIP3-202ENST00000420009 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
TNFAIP3-202ENST00000420009 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
TNFAIP3-202ENST00000420009 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
TNFAIP3-202ENST00000420009 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
TNFAIP3-202ENST00000420009 PCP4P48539 62 aa4.27□□□□□ -1.73
TNFAIP3-202ENST00000420009 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
TNFAIP3-202ENST00000420009 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
TNFAIP3-202ENST00000420009 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
TNFAIP3-202ENST00000420009 COX7CP15954 63 aa4.25□□□□□ -1.73
TNFAIP3-202ENST00000420009 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
TNFAIP3-202ENST00000420009 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
TNFAIP3-202ENST00000420009 UQCRQO14949 82 aa4.23□□□□□ -1.73
TNFAIP3-202ENST00000420009 H0YAA0 97 aa4.21□□□□□ -1.74
TNFAIP3-202ENST00000420009 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
TNFAIP3-202ENST00000420009 TRAV22A0A0B4J277 110 aa4.19□□□□□ -1.74
TNFAIP3-202ENST00000420009 A8MUN3 132 aa4.19□□□□□ -1.74
TNFAIP3-202ENST00000420009 H0Y9P7 68 aa4.19□□□□□ -1.74
TNFAIP3-202ENST00000420009 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
TNFAIP3-202ENST00000420009 CYSTM1Q9H1C7 97 aa4.19□□□□□ -1.74
TNFAIP3-202ENST00000420009 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
TNFAIP3-202ENST00000420009 H3BPC8 53 aa4.15□□□□□ -1.75
TNFAIP3-202ENST00000420009 MP68P56378 58 aa4.15□□□□□ -1.75
TNFAIP3-202ENST00000420009 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
TNFAIP3-202ENST00000420009 LINC00208Q96KT6 92 aa4.15□□□□□ -1.75
TNFAIP3-202ENST00000420009 CYP4F30PQ9H0H9 118 aa4.14□□□□□ -1.75
TNFAIP3-202ENST00000420009 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
TNFAIP3-202ENST00000420009 H7BZZ5 65 aa4.12□□□□□ -1.75
TNFAIP3-202ENST00000420009 NDUFC1O43677 76 aa4.12□□□□□ -1.75
TNFAIP3-202ENST00000420009 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
TNFAIP3-202ENST00000420009 LOC101927531A0A1B0GV80 90 aa4.11□□□□□ -1.75
TNFAIP3-202ENST00000420009 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
TNFAIP3-202ENST00000420009 TMEM258P61165 79 aa4.06□□□□□ -1.76
TNFAIP3-202ENST00000420009 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
TNFAIP3-202ENST00000420009 R4GN34 69 aa4.04□□□□□ -1.76
TNFAIP3-202ENST00000420009 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
TNFAIP3-202ENST00000420009 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
TNFAIP3-202ENST00000420009 P0C880 135 aa4.01□□□□□ -1.77
TNFAIP3-202ENST00000420009 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
TNFAIP3-202ENST00000420009 M0QZ58 72 aa4□□□□□ -1.77
TNFAIP3-202ENST00000420009 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
TNFAIP3-202ENST00000420009 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
TNFAIP3-202ENST00000420009 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
TNFAIP3-202ENST00000420009 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
TNFAIP3-202ENST00000420009 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
TNFAIP3-202ENST00000420009 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
TNFAIP3-202ENST00000420009 COA5Q86WW8 74 aa3.92□□□□□ -1.78
TNFAIP3-202ENST00000420009 ACYP2P14621 99 aa3.9□□□□□ -1.79
TNFAIP3-202ENST00000420009 RPS28P62857 69 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms