RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 A8MUN3 132 aa3.15□□□□□ -1.91
LINC00342-201ENST00000412393 H0Y9J4 135 aa3.15□□□□□ -1.91
LINC00342-201ENST00000412393 MP68P56378 58 aa3.15□□□□□ -1.91
LINC00342-201ENST00000412393 CASC2Q6XLA1 102 aa3.14□□□□□ -1.91
LINC00342-201ENST00000412393 LINC00208Q96KT6 92 aa3.14□□□□□ -1.91
LINC00342-201ENST00000412393 IGLV7-46A0A075B6I9 117 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 A6NED7 52 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 SPRR1BP22528 89 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 LRP2P98164 4655 aa3.13□□□□□ -1.91
LINC00342-201ENST00000412393 K7EQZ3 153 aa3.12□□□□□ -1.91
LINC00342-201ENST00000412393 ZNF861PO60384 105 aa3.12□□□□□ -1.91
LINC00342-201ENST00000412393 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
LINC00342-201ENST00000412393 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
LINC00342-201ENST00000412393 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
LINC00342-201ENST00000412393 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
LINC00342-201ENST00000412393 LINC00472Q9H8W2 130 aa3.1□□□□□ -1.91
LINC00342-201ENST00000412393 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
LINC00342-201ENST00000412393 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
LINC00342-201ENST00000412393 A8MWP4 228 aa3.08□□□□□ -1.92
LINC00342-201ENST00000412393 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
LINC00342-201ENST00000412393 IGFL1Q6UW32 110 aa3.08□□□□□ -1.92
LINC00342-201ENST00000412393 DEFB105AQ8NG35 78 aa3.08□□□□□ -1.92
LINC00342-201ENST00000412393 LPAP08519 4548 aa3.07□□□□□ -1.92
LINC00342-201ENST00000412393 H0Y9P7 68 aa3.07□□□□□ -1.92
LINC00342-201ENST00000412393 PRLHP81277 87 aa3.07□□□□□ -1.92
LINC00342-201ENST00000412393 KRTAP13-1Q8IUC0 172 aa3.07□□□□□ -1.92
LINC00342-201ENST00000412393 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
LINC00342-201ENST00000412393 MOBPQ13875 183 aa3.06□□□□□ -1.92
LINC00342-201ENST00000412393 PRR4Q16378 134 aa3.06□□□□□ -1.92
LINC00342-201ENST00000412393 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
LINC00342-201ENST00000412393 LINC00313P59037 77 aa3.04□□□□□ -1.92
LINC00342-201ENST00000412393 KRTAP13-2Q52LG2 175 aa3.04□□□□□ -1.92
LINC00342-201ENST00000412393 COA5Q86WW8 74 aa3.04□□□□□ -1.92
LINC00342-201ENST00000412393 A0A087WSZ3 146 aa3.03□□□□□ -1.92
LINC00342-201ENST00000412393 MMP24-AS1A0A0U1RRL7 71 aa3.03□□□□□ -1.92
LINC00342-201ENST00000412393 A8MU10 97 aa3.03□□□□□ -1.92
LINC00342-201ENST00000412393 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
LINC00342-201ENST00000412393 WFDC13Q8IUB5 93 aa3.02□□□□□ -1.93
LINC00342-201ENST00000412393 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
LINC00342-201ENST00000412393 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
LINC00342-201ENST00000412393 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
LINC00342-201ENST00000412393 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
LINC00342-201ENST00000412393 SPAG11AQ6PDA7 123 aa2.99□□□□□ -1.93
LINC00342-201ENST00000412393 Q96NJ1 140 aa2.99□□□□□ -1.93
LINC00342-201ENST00000412393 HRES1P13985 223 aa2.98□□□□□ -1.93
LINC00342-201ENST00000412393 LINC00483Q53H64 154 aa2.98□□□□□ -1.93
LINC00342-201ENST00000412393 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
LINC00342-201ENST00000412393 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 TPRXLQ17RH7 258 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 C8orf17Q9NRJ1 99 aa2.97□□□□□ -1.93
LINC00342-201ENST00000412393 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
LINC00342-201ENST00000412393 IGLV9-49A0A0B4J1Y8 123 aa2.96□□□□□ -1.94
LINC00342-201ENST00000412393 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
LINC00342-201ENST00000412393 SPINK1P00995 79 aa2.96□□□□□ -1.94
LINC00342-201ENST00000412393 MRPL34Q9BQ48 92 aaKnown RBP2.96□□□□□ -1.94
LINC00342-201ENST00000412393 ACYP2P14621 99 aa2.95□□□□□ -1.94
LINC00342-201ENST00000412393 SPINK7P58062 85 aa2.95□□□□□ -1.94
LINC00342-201ENST00000412393 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
LINC00342-201ENST00000412393 A0A0G2JQZ4 141 aa2.94□□□□□ -1.94
LINC00342-201ENST00000412393 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
LINC00342-201ENST00000412393 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
LINC00342-201ENST00000412393 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
LINC00342-201ENST00000412393 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
LINC00342-201ENST00000412393 RPS29P62273 56 aaKnown RBP2.93□□□□□ -1.94
LINC00342-201ENST00000412393 DMAC1Q96GE9 116 aa2.93□□□□□ -1.94
LINC00342-201ENST00000412393 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
LINC00342-201ENST00000412393 UQCR11O14957 56 aa2.9□□□□□ -1.95
LINC00342-201ENST00000412393 PCOTHQ58A44 107 aa2.9□□□□□ -1.95
LINC00342-201ENST00000412393 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.95
LINC00342-201ENST00000412393 MUC2Q02817 5179 aa2.89□□□□□ -1.95
LINC00342-201ENST00000412393 A0A1B0GU69 56 aa2.88□□□□□ -1.95
LINC00342-201ENST00000412393 ROMO1P60602 79 aa2.88□□□□□ -1.95
LINC00342-201ENST00000412393 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
LINC00342-201ENST00000412393 Q5W150 140 aa2.88□□□□□ -1.95
LINC00342-201ENST00000412393 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
LINC00342-201ENST00000412393 ADM2Q7Z4H4 148 aa2.86□□□□□ -1.95
LINC00342-201ENST00000412393 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
LINC00342-201ENST00000412393 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
LINC00342-201ENST00000412393 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
LINC00342-201ENST00000412393 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
LINC00342-201ENST00000412393 RPL37P61927 97 aaKnown RBP2.79□□□□□ -1.96
LINC00342-201ENST00000412393 A8MUU9 505 aa2.77□□□□□ -1.97
LINC00342-201ENST00000412393 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
LINC00342-201ENST00000412393 K7ERS5 55 aa2.75□□□□□ -1.97
LINC00342-201ENST00000412393 MT1HP80294 61 aa2.75□□□□□ -1.97
LINC00342-201ENST00000412393 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
LINC00342-201ENST00000412393 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
LINC00342-201ENST00000412393 M0R2T5 61 aa2.71□□□□□ -1.98
LINC00342-201ENST00000412393 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
LINC00342-201ENST00000412393 H0YAA0 97 aa2.7□□□□□ -1.98
LINC00342-201ENST00000412393 P0C880 135 aa2.7□□□□□ -1.98
LINC00342-201ENST00000412393 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
LINC00342-201ENST00000412393 A0A1B0GU33 70 aa2.69□□□□□ -1.98
LINC00342-201ENST00000412393 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
LINC00342-201ENST00000412393 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms