RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 P0C880 135 aa5.53□□□□□ -1.52
NIF3L1-202ENST00000409020 HRES1P13985 223 aa5.53□□□□□ -1.52
NIF3L1-202ENST00000409020 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
NIF3L1-202ENST00000409020 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
NIF3L1-202ENST00000409020 WFDC13Q8IUB5 93 aa5.48□□□□□ -1.53
NIF3L1-202ENST00000409020 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
NIF3L1-202ENST00000409020 Q6ZRX8 168 aa5.47□□□□□ -1.53
NIF3L1-202ENST00000409020 IGLV9-49A0A0B4J1Y8 123 aa5.46□□□□□ -1.54
NIF3L1-202ENST00000409020 A0A1B0GU69 56 aa5.45□□□□□ -1.54
NIF3L1-202ENST00000409020 A8MWP4 228 aa5.45□□□□□ -1.54
NIF3L1-202ENST00000409020 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
NIF3L1-202ENST00000409020 Q8N377 158 aa5.45□□□□□ -1.54
NIF3L1-202ENST00000409020 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
NIF3L1-202ENST00000409020 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
NIF3L1-202ENST00000409020 K7ERS5 55 aa5.43□□□□□ -1.54
NIF3L1-202ENST00000409020 DHRS4-AS1Q9P1J3 65 aa5.42□□□□□ -1.54
NIF3L1-202ENST00000409020 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.54
NIF3L1-202ENST00000409020 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
NIF3L1-202ENST00000409020 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
NIF3L1-202ENST00000409020 A8MUU9 505 aa5.4□□□□□ -1.55
NIF3L1-202ENST00000409020 SPINK1P00995 79 aa5.4□□□□□ -1.55
NIF3L1-202ENST00000409020 ACYP2P14621 99 aa5.4□□□□□ -1.55
NIF3L1-202ENST00000409020 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
NIF3L1-202ENST00000409020 PCOTHQ58A44 107 aa5.39□□□□□ -1.55
NIF3L1-202ENST00000409020 SSBP3-AS1Q7Z2R9 100 aa5.37□□□□□ -1.55
NIF3L1-202ENST00000409020 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
NIF3L1-202ENST00000409020 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
NIF3L1-202ENST00000409020 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
NIF3L1-202ENST00000409020 SPRR1BP22528 89 aa5.34□□□□□ -1.55
NIF3L1-202ENST00000409020 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
NIF3L1-202ENST00000409020 NDUFAF8A1L188 74 aa5.34□□□□□ -1.56
NIF3L1-202ENST00000409020 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.56
NIF3L1-202ENST00000409020 Q5W150 140 aa5.32□□□□□ -1.56
NIF3L1-202ENST00000409020 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
NIF3L1-202ENST00000409020 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
NIF3L1-202ENST00000409020 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
NIF3L1-202ENST00000409020 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
NIF3L1-202ENST00000409020 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
NIF3L1-202ENST00000409020 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
NIF3L1-202ENST00000409020 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
NIF3L1-202ENST00000409020 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
NIF3L1-202ENST00000409020 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
NIF3L1-202ENST00000409020 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
NIF3L1-202ENST00000409020 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
NIF3L1-202ENST00000409020 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
NIF3L1-202ENST00000409020 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
NIF3L1-202ENST00000409020 IGFL1Q6UW32 110 aa5.24□□□□□ -1.57
NIF3L1-202ENST00000409020 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
NIF3L1-202ENST00000409020 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
NIF3L1-202ENST00000409020 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
NIF3L1-202ENST00000409020 Q96NJ1 140 aa5.14□□□□□ -1.59
NIF3L1-202ENST00000409020 MT1HP80294 61 aa5.13□□□□□ -1.59
NIF3L1-202ENST00000409020 MRPL34Q9BQ48 92 aaKnown RBP5.13□□□□□ -1.59
NIF3L1-202ENST00000409020 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
NIF3L1-202ENST00000409020 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
NIF3L1-202ENST00000409020 A0A1B0GVX0 72 aa5.09□□□□□ -1.59
NIF3L1-202ENST00000409020 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
NIF3L1-202ENST00000409020 H0YAA0 97 aa5.04□□□□□ -1.6
NIF3L1-202ENST00000409020 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
NIF3L1-202ENST00000409020 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
NIF3L1-202ENST00000409020 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
NIF3L1-202ENST00000409020 COX6B2Q6YFQ2 88 aa5□□□□□ -1.61
NIF3L1-202ENST00000409020 M0R2T5 61 aa4.98□□□□□ -1.61
NIF3L1-202ENST00000409020 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
NIF3L1-202ENST00000409020 CRIPTQ9P021 101 aa4.96□□□□□ -1.61
NIF3L1-202ENST00000409020 A0A1B0GU33 70 aa4.96□□□□□ -1.62
NIF3L1-202ENST00000409020 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
NIF3L1-202ENST00000409020 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
NIF3L1-202ENST00000409020 USH2AO75445 5202 aa4.95□□□□□ -1.62
NIF3L1-202ENST00000409020 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
NIF3L1-202ENST00000409020 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
NIF3L1-202ENST00000409020 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
NIF3L1-202ENST00000409020 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
NIF3L1-202ENST00000409020 MT2AP02795 61 aa4.78□□□□□ -1.64
NIF3L1-202ENST00000409020 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
NIF3L1-202ENST00000409020 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
NIF3L1-202ENST00000409020 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
NIF3L1-202ENST00000409020 MT1FP04733 61 aa4.76□□□□□ -1.65
NIF3L1-202ENST00000409020 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
NIF3L1-202ENST00000409020 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
NIF3L1-202ENST00000409020 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
NIF3L1-202ENST00000409020 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
NIF3L1-202ENST00000409020 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
NIF3L1-202ENST00000409020 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
NIF3L1-202ENST00000409020 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
NIF3L1-202ENST00000409020 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NIF3L1-202ENST00000409020 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
NIF3L1-202ENST00000409020 S4R3F8 94 aa4.53□□□□□ -1.68
NIF3L1-202ENST00000409020 INE1O15225 51 aa4.52□□□□□ -1.69
NIF3L1-202ENST00000409020 R4GN34 69 aa4.51□□□□□ -1.69
NIF3L1-202ENST00000409020 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
NIF3L1-202ENST00000409020 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
NIF3L1-202ENST00000409020 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
NIF3L1-202ENST00000409020 A0A0D9SG42 100 aa4.43□□□□□ -1.7
NIF3L1-202ENST00000409020 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
NIF3L1-202ENST00000409020 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
NIF3L1-202ENST00000409020 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
NIF3L1-202ENST00000409020 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
NIF3L1-202ENST00000409020 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
NIF3L1-202ENST00000409020 NEBP20929 6669 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms